RNA–Protein interactions for RNA: ENST00000346213.8

RAB5C-201, Transcript of RAB5C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5C, Length 1,671 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-201ENST00000346213 NR4A2P43354 598 aa13.72□□□□□ -0.21
RAB5C-201ENST00000346213 RORCP51449 518 aa13.72□□□□□ -0.21
RAB5C-201ENST00000346213 LOXL1Q08397 574 aaPredicted RBP13.72□□□□□ -0.21
RAB5C-201ENST00000346213 CCDC92Q53HC0 331 aaPredicted RBP13.72□□□□□ -0.21
RAB5C-201ENST00000346213 MFSD4AQ8N468 514 aa13.72□□□□□ -0.21
RAB5C-201ENST00000346213 RFLNBQ8N5W9 214 aa13.72□□□□□ -0.21
RAB5C-201ENST00000346213 ZNF511Q8NB15 262 aa13.72□□□□□ -0.21
RAB5C-201ENST00000346213 MNTQ99583 582 aa13.72□□□□□ -0.21
RAB5C-201ENST00000346213 TMED9Q9BVK6 235 aa13.72□□□□□ -0.21
RAB5C-201ENST00000346213 CDH20Q9HBT6 801 aa13.72□□□□□ -0.21
RAB5C-201ENST00000346213 B9D1Q9UPM9 204 aa13.72□□□□□ -0.21
RAB5C-201ENST00000346213 LHFPL6Q9Y693 200 aa13.72□□□□□ -0.21
RAB5C-201ENST00000346213 CHD3Q12873 2000 aaKnown RBP13.71□□□□□ -0.21
RAB5C-201ENST00000346213 ABCA1O95477 2261 aa13.71□□□□□ -0.21
RAB5C-201ENST00000346213 LRP5LA4QPB2 252 aa13.71□□□□□ -0.21
RAB5C-201ENST00000346213 E9PI62 339 aa13.71□□□□□ -0.21
RAB5C-201ENST00000346213 GABRPO00591 440 aa13.71□□□□□ -0.21
RAB5C-201ENST00000346213 RER1O15258 196 aa13.71□□□□□ -0.21
RAB5C-201ENST00000346213 OGG1O15527 345 aa13.71□□□□□ -0.21
RAB5C-201ENST00000346213 SYNGR3O43761 229 aa13.71□□□□□ -0.21
RAB5C-201ENST00000346213 CD1AP06126 327 aa13.71□□□□□ -0.21
RAB5C-201ENST00000346213 BMP4P12644 408 aa13.71□□□□□ -0.21
RAB5C-201ENST00000346213 DAOP14920 347 aa13.71□□□□□ -0.21
RAB5C-201ENST00000346213 COL8A2P25067 703 aa13.71□□□□□ -0.21
RAB5C-201ENST00000346213 BLVRAP53004 296 aa13.71□□□□□ -0.21
RAB5C-201ENST00000346213 GALK2Q01415 458 aa13.71□□□□□ -0.21
RAB5C-201ENST00000346213 CARTPTQ16568 116 aa13.71□□□□□ -0.21
RAB5C-201ENST00000346213 TBC1D28Q2M2D7 210 aa13.71□□□□□ -0.21
RAB5C-201ENST00000346213 RSPO1Q2MKA7 263 aaPredicted RBP13.71□□□□□ -0.21
RAB5C-201ENST00000346213 TP53I3Q53FA7 332 aa13.71□□□□□ -0.21
RAB5C-201ENST00000346213 DMKNQ6E0U4 476 aaPredicted RBP13.71□□□□□ -0.21
RAB5C-201ENST00000346213 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.71□□□□□ -0.21
RAB5C-201ENST00000346213 SNX33Q8WV41 574 aa13.71□□□□□ -0.21
RAB5C-201ENST00000346213 MARS2Q96GW9 593 aaKnown RBP13.71□□□□□ -0.21
RAB5C-201ENST00000346213 DYNLRB1Q9NP97 96 aa13.71□□□□□ -0.21
RAB5C-201ENST00000346213 FBXL3Q9UKT7 428 aa13.71□□□□□ -0.21
RAB5C-201ENST00000346213 PEX16Q9Y5Y5 336 aa13.71□□□□□ -0.21
RAB5C-201ENST00000346213 HIVEP2P31629 2446 aa13.71□□□□□ -0.22
RAB5C-201ENST00000346213 IQCMA0A1B0GVH7 501 aa13.7□□□□□ -0.22
RAB5C-201ENST00000346213 CD5LO43866 347 aa13.7□□□□□ -0.22
RAB5C-201ENST00000346213 RGS9O75916 674 aaPredicted RBP13.7□□□□□ -0.22
RAB5C-201ENST00000346213 ZNF16P17020 682 aaPredicted RBP13.7□□□□□ -0.22
RAB5C-201ENST00000346213 APLNRP35414 380 aa13.7□□□□□ -0.22
RAB5C-201ENST00000346213 EVX1P49640 407 aa13.7□□□□□ -0.22
RAB5C-201ENST00000346213 GBX2P52951 348 aaPredicted RBP13.7□□□□□ -0.22
RAB5C-201ENST00000346213 RIN1Q13671 783 aa13.7□□□□□ -0.22
RAB5C-201ENST00000346213 RGS7BPQ6MZT1 257 aaPredicted RBP13.7□□□□□ -0.22
RAB5C-201ENST00000346213 CORO6Q6QEF8 472 aa13.7□□□□□ -0.22
RAB5C-201ENST00000346213 TMEM91Q6ZNR0 172 aa13.7□□□□□ -0.22
RAB5C-201ENST00000346213 DPPA2Q7Z7J5 298 aa13.7□□□□□ -0.22
RAB5C-201ENST00000346213 OR1J1Q8NGS3 322 aa13.7□□□□□ -0.22
RAB5C-201ENST00000346213 SLC25A40Q8TBP6 338 aa13.7□□□□□ -0.22
RAB5C-201ENST00000346213 SLC25A46Q96AG3 418 aa13.7□□□□□ -0.22
RAB5C-201ENST00000346213 PELI1Q96FA3 418 aa13.7□□□□□ -0.22
RAB5C-201ENST00000346213 BARHL1Q9BZE3 327 aa13.7□□□□□ -0.22
RAB5C-201ENST00000346213 OR2J1Q9GZK6 312 aa13.7□□□□□ -0.22
RAB5C-201ENST00000346213 C6orf62Q9GZU0 229 aaPredicted RBP13.7□□□□□ -0.22
RAB5C-201ENST00000346213 SNTG1Q9NSN8 517 aa13.7□□□□□ -0.22
RAB5C-201ENST00000346213 MRPL22Q9NWU5 206 aaKnown RBP13.7□□□□□ -0.22
RAB5C-201ENST00000346213 TAAR3PQ9P1P4 343 aa13.7□□□□□ -0.22
RAB5C-201ENST00000346213 ASH2LQ9UBL3 628 aa13.7□□□□□ -0.22
RAB5C-201ENST00000346213 TIMM10BQ9Y5J6 103 aa13.7□□□□□ -0.22
RAB5C-201ENST00000346213 CACNG2Q9Y698 323 aa13.7□□□□□ -0.22
RAB5C-201ENST00000346213 YLPM1P49750 1951 aaKnown RBP13.7□□□□□ -0.22
RAB5C-201ENST00000346213 J3QRK9 145 aa13.69□□□□□ -0.22
RAB5C-201ENST00000346213 M0R233 179 aa13.69□□□□□ -0.22
RAB5C-201ENST00000346213 ICMTO60725 284 aa13.69□□□□□ -0.22
RAB5C-201ENST00000346213 LILRA1O75019 489 aa13.69□□□□□ -0.22
RAB5C-201ENST00000346213 SLC25A16P16260 332 aa13.69□□□□□ -0.22
RAB5C-201ENST00000346213 S100A5P33763 92 aa13.69□□□□□ -0.22
RAB5C-201ENST00000346213 SDC2P34741 201 aa13.69□□□□□ -0.22
RAB5C-201ENST00000346213 RPS27P42677 84 aaKnown RBP13.69□□□□□ -0.22
RAB5C-201ENST00000346213 PDLIM4P50479 330 aa13.69□□□□□ -0.22
RAB5C-201ENST00000346213 CCDC58Q4VC31 144 aa13.69□□□□□ -0.22
RAB5C-201ENST00000346213 ZNF684Q5T5D7 378 aa13.69□□□□□ -0.22
RAB5C-201ENST00000346213 ARL9Q6T311 187 aa13.69□□□□□ -0.22
RAB5C-201ENST00000346213 KCTD20Q7Z5Y7 419 aa13.69□□□□□ -0.22
RAB5C-201ENST00000346213 WDR76Q9H967 626 aa13.69□□□□□ -0.22
RAB5C-201ENST00000346213 TBCCD1Q9NVR7 557 aa13.69□□□□□ -0.22
RAB5C-201ENST00000346213 C5orf63A6NC05 138 aa13.69□□□□□ -0.22
RAB5C-201ENST00000346213 OR6C6A6NF89 314 aa13.69□□□□□ -0.22
RAB5C-201ENST00000346213 ZSCAN5BA6NJL1 495 aa13.69□□□□□ -0.22
RAB5C-201ENST00000346213 KIAA1324LA8MWY0 1029 aaPredicted RBP13.69□□□□□ -0.22
RAB5C-201ENST00000346213 KHDRBS3O75525 346 aaKnown RBP13.69□□□□□ -0.22
RAB5C-201ENST00000346213 RP2O75695 350 aa13.69□□□□□ -0.22
RAB5C-201ENST00000346213 CRABP1P29762 137 aa13.69□□□□□ -0.22
RAB5C-201ENST00000346213 MMP15P51511 669 aa13.69□□□□□ -0.22
RAB5C-201ENST00000346213 PSMD7P51665 324 aa13.69□□□□□ -0.22
RAB5C-201ENST00000346213 HIST1H3AP68431 136 aa13.69□□□□□ -0.22
RAB5C-201ENST00000346213 PLP2Q04941 152 aa13.69□□□□□ -0.22
RAB5C-201ENST00000346213 CDK5R1Q15078 307 aa13.69□□□□□ -0.22
RAB5C-201ENST00000346213 KCNMB1Q16558 191 aa13.69□□□□□ -0.22
RAB5C-201ENST00000346213 HIST2H3PS2Q5TEC6 136 aa13.69□□□□□ -0.22
RAB5C-201ENST00000346213 RPL22L1Q6P5R6 122 aaKnown RBP13.69□□□□□ -0.22
RAB5C-201ENST00000346213 CFAP77Q6ZQR2 320 aa13.69□□□□□ -0.22
RAB5C-201ENST00000346213 PLEKHG7Q6ZR37 379 aa13.69□□□□□ -0.22
RAB5C-201ENST00000346213 HIST2H3AQ71DI3 136 aa13.69□□□□□ -0.22
RAB5C-201ENST00000346213 GLB1L2Q8IW92 636 aa13.69□□□□□ -0.22
RAB5C-201ENST00000346213 MS4A15Q8N5U1 240 aa13.69□□□□□ -0.22
RAB5C-201ENST00000346213 SLC26A10Q8NG04 563 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms