RNA–Protein interactions for RNA: ENST00000340006.6

CSRP1-201, Transcript of cysteine and glycine rich protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSRP1, Length 1,952 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSRP1-201ENST00000340006 OCM2P0CE71 109 aa12.7□□□□□ -0.38
CSRP1-201ENST00000340006 TUBG1P23258 451 aa12.7□□□□□ -0.38
CSRP1-201ENST00000340006 CFL1P23528 166 aaKnown RBP12.7□□□□□ -0.38
CSRP1-201ENST00000340006 GLRXP35754 106 aa12.7□□□□□ -0.38
CSRP1-201ENST00000340006 RPS11P62280 158 aaKnown RBP eCLIP12.7□□□□□ -0.38
CSRP1-201ENST00000340006 ACSM3Q53FZ2 586 aa12.7□□□□□ -0.38
CSRP1-201ENST00000340006 YIF1BQ5BJH7 314 aa12.7□□□□□ -0.38
CSRP1-201ENST00000340006 DOK3Q7L591 496 aa12.7□□□□□ -0.38
CSRP1-201ENST00000340006 OR51A4Q8NGJ6 313 aa12.7□□□□□ -0.38
CSRP1-201ENST00000340006 OR13C3Q8NGS6 347 aa12.7□□□□□ -0.38
CSRP1-201ENST00000340006 GPR148Q8TDV2 347 aa12.7□□□□□ -0.38
CSRP1-201ENST00000340006 TSEN15Q8WW01 171 aaKnown RBP12.7□□□□□ -0.38
CSRP1-201ENST00000340006 LYZL4Q96KX0 146 aa12.7□□□□□ -0.38
CSRP1-201ENST00000340006 TUBG2Q9NRH3 451 aa12.7□□□□□ -0.38
CSRP1-201ENST00000340006 LOC107986453A0A1B0GWG9 222 aa12.69□□□□□ -0.38
CSRP1-201ENST00000340006 A6NIN4 97 aa12.69□□□□□ -0.38
CSRP1-201ENST00000340006 SIAH2O43255 324 aa12.69□□□□□ -0.38
CSRP1-201ENST00000340006 PLAUP00749 431 aa12.69□□□□□ -0.38
CSRP1-201ENST00000340006 COX6B1P14854 86 aa12.69□□□□□ -0.38
CSRP1-201ENST00000340006 THBS4P35443 961 aa12.69□□□□□ -0.38
CSRP1-201ENST00000340006 MAGEB1P43366 347 aa12.69□□□□□ -0.38
CSRP1-201ENST00000340006 SOX2P48431 317 aa12.69□□□□□ -0.38
CSRP1-201ENST00000340006 SELENOVP59797 346 aa12.69□□□□□ -0.38
CSRP1-201ENST00000340006 RPS23P62266 143 aaKnown RBP12.69□□□□□ -0.38
CSRP1-201ENST00000340006 LSAMPQ13449 338 aa12.69□□□□□ -0.38
CSRP1-201ENST00000340006 OR10AC1Q8NH08 325 aa12.69□□□□□ -0.38
CSRP1-201ENST00000340006 KLF14Q8TD94 323 aaPredicted RBP12.69□□□□□ -0.38
CSRP1-201ENST00000340006 SOX7Q9BT81 388 aa12.69□□□□□ -0.38
CSRP1-201ENST00000340006 REPIN1Q9BWE0 567 aaKnown RBP12.69□□□□□ -0.38
CSRP1-201ENST00000340006 CA10Q9NS85 328 aa12.69□□□□□ -0.38
CSRP1-201ENST00000340006 A0A1B0GTI1 187 aa12.69□□□□□ -0.38
CSRP1-201ENST00000340006 A0A1W2PPK0 400 aa12.69□□□□□ -0.38
CSRP1-201ENST00000340006 ZNF12P17014 697 aa12.69□□□□□ -0.38
CSRP1-201ENST00000340006 ACHEP22303 614 aa12.69□□□□□ -0.38
CSRP1-201ENST00000340006 MAP2K3P46734 347 aa12.69□□□□□ -0.38
CSRP1-201ENST00000340006 GSK3AP49840 483 aa12.69□□□□□ -0.38
CSRP1-201ENST00000340006 FAM3AP98173 230 aa12.69□□□□□ -0.38
CSRP1-201ENST00000340006 DAZAP2Q15038 168 aaPredicted RBP12.69□□□□□ -0.38
CSRP1-201ENST00000340006 CEACAM19Q7Z692 300 aa12.69□□□□□ -0.38
CSRP1-201ENST00000340006 NUP37Q8NFH4 326 aa12.69□□□□□ -0.38
CSRP1-201ENST00000340006 SYNPRQ8TBG9 265 aa12.69□□□□□ -0.38
CSRP1-201ENST00000340006 RGP1Q92546 391 aaPredicted RBP12.69□□□□□ -0.38
CSRP1-201ENST00000340006 MARS2Q96GW9 593 aaKnown RBP12.69□□□□□ -0.38
CSRP1-201ENST00000340006 HS3ST6Q96QI5 342 aa12.69□□□□□ -0.38
CSRP1-201ENST00000340006 CISD1Q9NZ45 108 aaKnown RBP12.69□□□□□ -0.38
CSRP1-201ENST00000340006 KCNN3Q9UGI6 736 aa12.69□□□□□ -0.38
CSRP1-201ENST00000340006 DHDHQ9UQ10 334 aa12.69□□□□□ -0.38
CSRP1-201ENST00000340006 CMAHPQ9Y471 501 aa12.69□□□□□ -0.38
CSRP1-201ENST00000340006 SHISA9B4DS77 424 aa12.68□□□□□ -0.38
CSRP1-201ENST00000340006 NKX6-1P78426 367 aaPredicted RBP12.68□□□□□ -0.38
CSRP1-201ENST00000340006 ZMAT1Q5H9K5 638 aa12.68□□□□□ -0.38
CSRP1-201ENST00000340006 FAM27D1Q5T7N8 215 aa12.68□□□□□ -0.38
CSRP1-201ENST00000340006 OR2T2Q6IF00 324 aa12.68□□□□□ -0.38
CSRP1-201ENST00000340006 SEMA6DQ8NFY4 1073 aa12.68□□□□□ -0.38
CSRP1-201ENST00000340006 SPSB4Q96A44 273 aa12.68□□□□□ -0.38
CSRP1-201ENST00000340006 FGGYQ96C11 551 aa12.68□□□□□ -0.38
CSRP1-201ENST00000340006 OR14A2Q96R54 314 aa12.68□□□□□ -0.38
CSRP1-201ENST00000340006 OPA3Q9H6K4 179 aa12.68□□□□□ -0.38
CSRP1-201ENST00000340006 PLEKHA1Q9HB21 404 aa12.68□□□□□ -0.38
CSRP1-201ENST00000340006 PIGLQ9Y2B2 252 aa12.68□□□□□ -0.38
CSRP1-201ENST00000340006 ROS1P08922 2347 aa12.68□□□□□ -0.38
CSRP1-201ENST00000340006 CRYBG3Q68DQ2 2970 aa12.67□□□□□ -0.38
CSRP1-201ENST00000340006 PKDREJQ9NTG1 2253 aa12.67□□□□□ -0.38
CSRP1-201ENST00000340006 A6NNC1 897 aa12.67□□□□□ -0.38
CSRP1-201ENST00000340006 DHRS3O75911 302 aa12.67□□□□□ -0.38
CSRP1-201ENST00000340006 CDRT1O95170 752 aa12.67□□□□□ -0.38
CSRP1-201ENST00000340006 CD2P06729 351 aa12.67□□□□□ -0.38
CSRP1-201ENST00000340006 RAC2P15153 192 aa12.67□□□□□ -0.38
CSRP1-201ENST00000340006 SDC2P34741 201 aa12.67□□□□□ -0.38
CSRP1-201ENST00000340006 GNALP38405 381 aa12.67□□□□□ -0.38
CSRP1-201ENST00000340006 RPS19P39019 145 aaKnown RBP12.67□□□□□ -0.38
CSRP1-201ENST00000340006 MXD1Q05195 221 aa12.67□□□□□ -0.38
CSRP1-201ENST00000340006 RIPPLY1Q0D2K3 151 aa12.67□□□□□ -0.38
CSRP1-201ENST00000340006 PSG7Q13046 419 aa12.67□□□□□ -0.38
CSRP1-201ENST00000340006 DGUOKQ16854 277 aa12.67□□□□□ -0.38
CSRP1-201ENST00000340006 FBXW12Q6X9E4 464 aa12.67□□□□□ -0.38
CSRP1-201ENST00000340006 BHLHE23Q8NDY6 225 aa12.67□□□□□ -0.38
CSRP1-201ENST00000340006 TMEM171Q8WVE6 324 aa12.67□□□□□ -0.38
CSRP1-201ENST00000340006 NEUROG1Q92886 237 aa12.67□□□□□ -0.38
CSRP1-201ENST00000340006 HAVCR1Q96D42 359 aa12.67□□□□□ -0.38
CSRP1-201ENST00000340006 PPIL3Q9H2H8 161 aaKnown RBP12.67□□□□□ -0.38
CSRP1-201ENST00000340006 ABCA4P78363 2273 aa12.67□□□□□ -0.38
CSRP1-201ENST00000340006 ZNF879B4DU55 563 aa12.67□□□□□ -0.38
CSRP1-201ENST00000340006 GATBO75879 557 aaKnown RBP12.67□□□□□ -0.38
CSRP1-201ENST00000340006 IL1AP01583 271 aa12.67□□□□□ -0.38
CSRP1-201ENST00000340006 ZNF20P17024 532 aa12.67□□□□□ -0.38
CSRP1-201ENST00000340006 COL8A1P27658 744 aa12.67□□□□□ -0.38
CSRP1-201ENST00000340006 MPV17P39210 176 aa12.67□□□□□ -0.38
CSRP1-201ENST00000340006 Q499Y3 187 aa12.67□□□□□ -0.38
CSRP1-201ENST00000340006 PAMR1Q6UXH9 720 aa12.67□□□□□ -0.38
CSRP1-201ENST00000340006 OR5AS1Q8N127 324 aa12.67□□□□□ -0.38
CSRP1-201ENST00000340006 TMEM106AQ96A25 262 aa12.67□□□□□ -0.38
CSRP1-201ENST00000340006 SYT3Q9BQG1 590 aa12.67□□□□□ -0.38
CSRP1-201ENST00000340006 SLIRPQ9GZT3 109 aaKnown RBP12.67□□□□□ -0.38
CSRP1-201ENST00000340006 TPK1Q9H3S4 243 aa12.67□□□□□ -0.38
CSRP1-201ENST00000340006 ZNF275Q9NSD4 429 aaPredicted RBP12.67□□□□□ -0.38
CSRP1-201ENST00000340006 SNTG1Q9NSN8 517 aa12.67□□□□□ -0.38
CSRP1-201ENST00000340006 PLCE1Q9P212 2302 aa12.66□□□□□ -0.38
CSRP1-201ENST00000340006 DCHS2Q6V1P9 2916 aa12.66□□□□□ -0.38
CSRP1-201ENST00000340006 SHISA3A0PJX4 238 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms