RNA–Protein interactions for RNA: ENST00000334218.9

CDC42BPA-201, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,134 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-201ENST00000334218 RTL8AQ9BWD3 113 aa5.53□□□□□ -1.52
CDC42BPA-201ENST00000334218 ARHGAP21Q5T5U3 1957 aa5.53□□□□□ -1.52
CDC42BPA-201ENST00000334218 TRAV5A0A0B4J249 113 aa5.53□□□□□ -1.52
CDC42BPA-201ENST00000334218 MPTX1A8MV57 137 aa5.53□□□□□ -1.52
CDC42BPA-201ENST00000334218 EPHX1P07099 455 aa5.53□□□□□ -1.52
CDC42BPA-201ENST00000334218 KLRC1P26715 233 aa5.53□□□□□ -1.52
CDC42BPA-201ENST00000334218 PSMB6P28072 239 aa5.53□□□□□ -1.52
CDC42BPA-201ENST00000334218 P2RY4P51582 365 aa5.53□□□□□ -1.52
CDC42BPA-201ENST00000334218 ZNF133P52736 654 aaPredicted RBP5.53□□□□□ -1.52
CDC42BPA-201ENST00000334218 BCL7AQ4VC05 210 aa5.53□□□□□ -1.52
CDC42BPA-201ENST00000334218 LDLRAD2Q5SZI1 272 aa5.53□□□□□ -1.52
CDC42BPA-201ENST00000334218 PLAG1Q6DJT9 500 aa5.53□□□□□ -1.52
CDC42BPA-201ENST00000334218 ABRAQ8N0Z2 381 aa5.53□□□□□ -1.52
CDC42BPA-201ENST00000334218 DTWD1Q8N5C7 304 aa5.53□□□□□ -1.52
CDC42BPA-201ENST00000334218 DERL3Q96Q80 235 aa5.53□□□□□ -1.52
CDC42BPA-201ENST00000334218 SSBP3Q9BWW4 388 aaPredicted RBP5.53□□□□□ -1.52
CDC42BPA-201ENST00000334218 NPDC1Q9NQX5 325 aaPredicted RBP5.53□□□□□ -1.52
CDC42BPA-201ENST00000334218 LAMB1P07942 1786 aa5.53□□□□□ -1.52
CDC42BPA-201ENST00000334218 TRAV30A0A087WSZ9 112 aa5.53□□□□□ -1.52
CDC42BPA-201ENST00000334218 A0A0G2JMM0 328 aa5.53□□□□□ -1.52
CDC42BPA-201ENST00000334218 A0A1W2PPB8 328 aa5.53□□□□□ -1.52
CDC42BPA-201ENST00000334218 GAGE12JA6NER3 117 aa5.53□□□□□ -1.52
CDC42BPA-201ENST00000334218 KIR3DP1A8MWS1 328 aa5.53□□□□□ -1.52
CDC42BPA-201ENST00000334218 SLC37A4O43826 429 aa5.53□□□□□ -1.52
CDC42BPA-201ENST00000334218 PPP1R11O60927 126 aaPredicted RBP5.53□□□□□ -1.52
CDC42BPA-201ENST00000334218 GAGE7O76087 117 aa5.53□□□□□ -1.52
CDC42BPA-201ENST00000334218 SHBGP04278 402 aa5.53□□□□□ -1.52
CDC42BPA-201ENST00000334218 GAGE12FP0CL80 117 aa5.53□□□□□ -1.52
CDC42BPA-201ENST00000334218 GAGE12GP0CL81 117 aa5.53□□□□□ -1.52
CDC42BPA-201ENST00000334218 GAGE12IP0CL82 117 aa5.53□□□□□ -1.52
CDC42BPA-201ENST00000334218 GABRB3P28472 473 aa5.53□□□□□ -1.52
CDC42BPA-201ENST00000334218 CLDN20P56880 219 aa5.53□□□□□ -1.52
CDC42BPA-201ENST00000334218 GAGE4Q13068 117 aa5.53□□□□□ -1.52
CDC42BPA-201ENST00000334218 GDF6Q6KF10 455 aaPredicted RBP5.53□□□□□ -1.52
CDC42BPA-201ENST00000334218 FIGLAQ6QHK4 219 aa5.53□□□□□ -1.52
CDC42BPA-201ENST00000334218 Q6ZSR6 202 aa5.53□□□□□ -1.52
CDC42BPA-201ENST00000334218 NRARPQ7Z6K4 114 aa5.53□□□□□ -1.52
CDC42BPA-201ENST00000334218 ADGRG5Q8IZF4 528 aa5.53□□□□□ -1.52
CDC42BPA-201ENST00000334218 ZNF563Q8TA94 476 aa5.53□□□□□ -1.52
CDC42BPA-201ENST00000334218 HMGCLL1Q8TB92 370 aa5.53□□□□□ -1.52
CDC42BPA-201ENST00000334218 ACO2Q99798 780 aaKnown RBP5.53□□□□□ -1.52
CDC42BPA-201ENST00000334218 MEGF9Q9H1U4 602 aa5.53□□□□□ -1.52
CDC42BPA-201ENST00000334218 FKRPQ9H9S5 495 aa5.53□□□□□ -1.52
CDC42BPA-201ENST00000334218 SLC45A2Q9UMX9 530 aa5.53□□□□□ -1.52
CDC42BPA-201ENST00000334218 MOKQ9UQ07 419 aa5.53□□□□□ -1.52
CDC42BPA-201ENST00000334218 TRAV8-4A0A0B4J246 113 aa5.53□□□□□ -1.52
CDC42BPA-201ENST00000334218 PRSS56P0CW18 603 aa5.53□□□□□ -1.52
CDC42BPA-201ENST00000334218 MGAT1P26572 445 aa5.53□□□□□ -1.52
CDC42BPA-201ENST00000334218 AVPR2P30518 371 aa5.53□□□□□ -1.52
CDC42BPA-201ENST00000334218 PLGLB1Q02325 96 aa5.53□□□□□ -1.52
CDC42BPA-201ENST00000334218 CPZQ66K79 652 aa5.53□□□□□ -1.52
CDC42BPA-201ENST00000334218 DOK3Q7L591 496 aa5.53□□□□□ -1.52
CDC42BPA-201ENST00000334218 GALNT16Q8N428 558 aa5.53□□□□□ -1.52
CDC42BPA-201ENST00000334218 SPICQ8N5J4 248 aa5.53□□□□□ -1.52
CDC42BPA-201ENST00000334218 NPY6RQ99463 290 aa5.53□□□□□ -1.52
CDC42BPA-201ENST00000334218 SLC29A3Q9BZD2 475 aa5.53□□□□□ -1.52
CDC42BPA-201ENST00000334218 ANAPC1Q9H1A4 1944 aa5.53□□□□□ -1.52
CDC42BPA-201ENST00000334218 M0R2N6 131 aa5.53□□□□□ -1.52
CDC42BPA-201ENST00000334218 SOCS2O14508 198 aa5.53□□□□□ -1.52
CDC42BPA-201ENST00000334218 NRP1O14786 923 aa5.53□□□□□ -1.52
CDC42BPA-201ENST00000334218 EMDP50402 254 aa5.53□□□□□ -1.52
CDC42BPA-201ENST00000334218 C2orf73Q8N5S3 287 aaPredicted RBP5.53□□□□□ -1.52
CDC42BPA-201ENST00000334218 OR4F5Q8NH21 305 aa5.53□□□□□ -1.52
CDC42BPA-201ENST00000334218 OR4F4Q96R69 305 aa5.53□□□□□ -1.52
CDC42BPA-201ENST00000334218 SDF2Q99470 211 aa5.53□□□□□ -1.52
CDC42BPA-201ENST00000334218 PBX4Q9BYU1 374 aa5.53□□□□□ -1.52
CDC42BPA-201ENST00000334218 A4GNTQ9UNA3 340 aa5.53□□□□□ -1.52
CDC42BPA-201ENST00000334218 MYMKA6NI61 221 aa5.53□□□□□ -1.52
CDC42BPA-201ENST00000334218 LEUTXA8MZ59 168 aa5.53□□□□□ -1.52
CDC42BPA-201ENST00000334218 KIR2DL2P43627 348 aaPredicted RBP5.53□□□□□ -1.52
CDC42BPA-201ENST00000334218 CCR5P51681 352 aa5.53□□□□□ -1.52
CDC42BPA-201ENST00000334218 NR0B2Q15466 257 aa5.53□□□□□ -1.52
CDC42BPA-201ENST00000334218 MBNL2Q5VZF2 373 aaKnown RBP5.53□□□□□ -1.52
CDC42BPA-201ENST00000334218 TMEM81Q6P7N7 255 aa5.53□□□□□ -1.52
CDC42BPA-201ENST00000334218 MPZL3Q6UWV2 235 aa5.53□□□□□ -1.52
CDC42BPA-201ENST00000334218 FAM57BQ71RH2 274 aa5.53□□□□□ -1.52
CDC42BPA-201ENST00000334218 C17orf64Q86WR6 236 aa5.53□□□□□ -1.52
CDC42BPA-201ENST00000334218 TMPRSS12Q86WS5 348 aa5.53□□□□□ -1.52
CDC42BPA-201ENST00000334218 BVESQ8NE79 360 aa5.53□□□□□ -1.52
CDC42BPA-201ENST00000334218 GHITMQ9H3K2 345 aa5.53□□□□□ -1.52
CDC42BPA-201ENST00000334218 NKX1-2Q9UD57 310 aaPredicted RBP5.53□□□□□ -1.52
CDC42BPA-201ENST00000334218 PLXND1Q9Y4D7 1925 aa5.52□□□□□ -1.53
CDC42BPA-201ENST00000334218 LRRC3CA6NJW4 275 aa5.52□□□□□ -1.53
CDC42BPA-201ENST00000334218 TEX33O43247 280 aa5.52□□□□□ -1.53
CDC42BPA-201ENST00000334218 HLA-DRB1P01911 266 aa5.52□□□□□ -1.53
CDC42BPA-201ENST00000334218 HOXB5P09067 269 aa5.52□□□□□ -1.53
CDC42BPA-201ENST00000334218 P2RY1P47900 373 aa5.52□□□□□ -1.53
CDC42BPA-201ENST00000334218 NUTF2P61970 127 aaKnown RBP5.52□□□□□ -1.53
CDC42BPA-201ENST00000334218 TBC1D28Q2M2D7 210 aa5.52□□□□□ -1.53
CDC42BPA-201ENST00000334218 SLC46A3Q7Z3Q1 461 aa5.52□□□□□ -1.53
CDC42BPA-201ENST00000334218 GUCD1Q96NT3 240 aa5.52□□□□□ -1.53
CDC42BPA-201ENST00000334218 TRAV8-2A0A0B4J237 113 aa5.52□□□□□ -1.53
CDC42BPA-201ENST00000334218 ARNTLO00327 626 aa5.52□□□□□ -1.53
CDC42BPA-201ENST00000334218 GNG7O60262 68 aa5.52□□□□□ -1.53
CDC42BPA-201ENST00000334218 GJB5O95377 273 aa5.52□□□□□ -1.53
CDC42BPA-201ENST00000334218 MTNR1AP48039 350 aa5.52□□□□□ -1.53
CDC42BPA-201ENST00000334218 GPNMBQ14956 572 aa5.52□□□□□ -1.53
CDC42BPA-201ENST00000334218 ZNF528Q3MIS6 628 aa5.52□□□□□ -1.53
CDC42BPA-201ENST00000334218 ZNF761Q86XN6 746 aaPredicted RBP5.52□□□□□ -1.53
CDC42BPA-201ENST00000334218 OR6X1Q8NH79 312 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms