RNA–Protein interactions for RNA: ENST00000329399.6

PDLIM1-201, Transcript of PDZ and LIM domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM1, Length 1,452 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-201ENST00000329399 MPGP29372 298 aa14.25□□□□□ -0.13
PDLIM1-201ENST00000329399 ARR3P36575 388 aa14.25□□□□□ -0.13
PDLIM1-201ENST00000329399 CX3CR1P49238 355 aa14.25□□□□□ -0.13
PDLIM1-201ENST00000329399 EVX1P49640 407 aa14.25□□□□□ -0.13
PDLIM1-201ENST00000329399 RIN1Q13671 783 aa14.25□□□□□ -0.13
PDLIM1-201ENST00000329399 P2RY6Q15077 328 aa14.25□□□□□ -0.13
PDLIM1-201ENST00000329399 DOK3Q7L591 496 aa14.25□□□□□ -0.13
PDLIM1-201ENST00000329399 SERPINA12Q8IW75 414 aa14.25□□□□□ -0.13
PDLIM1-201ENST00000329399 CDH26Q8IXH8 852 aa14.25□□□□□ -0.13
PDLIM1-201ENST00000329399 OR13C3Q8NGS6 347 aa14.25□□□□□ -0.13
PDLIM1-201ENST00000329399 FBXO17Q96EF6 278 aa14.25□□□□□ -0.13
PDLIM1-201ENST00000329399 PIK3IP1Q96FE7 263 aa14.25□□□□□ -0.13
PDLIM1-201ENST00000329399 ALKBH3Q96Q83 286 aaPredicted RBP14.25□□□□□ -0.13
PDLIM1-201ENST00000329399 SH3GL3Q99963 347 aa14.25□□□□□ -0.13
PDLIM1-201ENST00000329399 COMMD3Q9UBI1 195 aa14.25□□□□□ -0.13
PDLIM1-201ENST00000329399 SPATA2Q9UM82 520 aa14.25□□□□□ -0.13
PDLIM1-201ENST00000329399 ETV7Q9Y603 341 aa14.25□□□□□ -0.13
PDLIM1-201ENST00000329399 A0A1W2PR80 420 aa14.25□□□□□ -0.13
PDLIM1-201ENST00000329399 FABP12A6NFH5 140 aa14.25□□□□□ -0.13
PDLIM1-201ENST00000329399 ANXA2P2A6NMY6 339 aa14.25□□□□□ -0.13
PDLIM1-201ENST00000329399 DHRS7CA6NNS2 312 aa14.25□□□□□ -0.13
PDLIM1-201ENST00000329399 SYT7O43581 403 aa14.25□□□□□ -0.13
PDLIM1-201ENST00000329399 WNT11O96014 354 aa14.25□□□□□ -0.13
PDLIM1-201ENST00000329399 APOA1P02647 267 aa14.25□□□□□ -0.13
PDLIM1-201ENST00000329399 ANXA2P07355 339 aaKnown RBP14.25□□□□□ -0.13
PDLIM1-201ENST00000329399 ERCC1P07992 297 aaPredicted RBP14.25□□□□□ -0.13
PDLIM1-201ENST00000329399 ACSM4P0C7M7 580 aa14.25□□□□□ -0.13
PDLIM1-201ENST00000329399 ZNF121P58317 390 aaPredicted RBP14.25□□□□□ -0.13
PDLIM1-201ENST00000329399 TGFBR3Q03167 851 aa14.25□□□□□ -0.13
PDLIM1-201ENST00000329399 KRTAP27-1Q3LI81 207 aa14.25□□□□□ -0.13
PDLIM1-201ENST00000329399 OTPQ5XKR4 325 aa14.25□□□□□ -0.13
PDLIM1-201ENST00000329399 GLT8D1Q68CQ7 371 aa14.25□□□□□ -0.13
PDLIM1-201ENST00000329399 Q6ZSR3 168 aa14.25□□□□□ -0.13
PDLIM1-201ENST00000329399 PGAP1Q75T13 922 aa14.25□□□□□ -0.13
PDLIM1-201ENST00000329399 CDH24Q86UP0 819 aa14.25□□□□□ -0.13
PDLIM1-201ENST00000329399 LRRC18Q8N456 261 aa14.25□□□□□ -0.13
PDLIM1-201ENST00000329399 NKAIN3Q8N8D7 197 aa14.25□□□□□ -0.13
PDLIM1-201ENST00000329399 OR5D14Q8NGL3 314 aa14.25□□□□□ -0.13
PDLIM1-201ENST00000329399 OR1F12Q8NHA8 337 aa14.25□□□□□ -0.13
PDLIM1-201ENST00000329399 NANOS1Q8WY41 292 aaKnown RBP14.25□□□□□ -0.13
PDLIM1-201ENST00000329399 BOD1Q96IK1 185 aa14.25□□□□□ -0.13
PDLIM1-201ENST00000329399 RGCCQ9H4X1 137 aa14.25□□□□□ -0.13
PDLIM1-201ENST00000329399 SLC17A5Q9NRA2 495 aa14.25□□□□□ -0.13
PDLIM1-201ENST00000329399 ZNF275Q9NSD4 429 aaPredicted RBP14.25□□□□□ -0.13
PDLIM1-201ENST00000329399 DAPK2Q9UIK4 370 aa14.25□□□□□ -0.13
PDLIM1-201ENST00000329399 ITGB1BP2Q9UKP3 347 aa14.25□□□□□ -0.13
PDLIM1-201ENST00000329399 PLCE1Q9P212 2302 aa14.24□□□□□ -0.13
PDLIM1-201ENST00000329399 ACANP16112 2415 aa14.24□□□□□ -0.13
PDLIM1-201ENST00000329399 F8P00451 2351 aa14.24□□□□□ -0.13
PDLIM1-201ENST00000329399 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP14.24□□□□□ -0.13
PDLIM1-201ENST00000329399 LOC390937A0A1W2PQ73 354 aa14.24□□□□□ -0.13
PDLIM1-201ENST00000329399 SYNGR3O43761 229 aa14.24□□□□□ -0.13
PDLIM1-201ENST00000329399 MTRF1O75570 445 aaKnown RBP14.24□□□□□ -0.13
PDLIM1-201ENST00000329399 RAD51DO75771 328 aa14.24□□□□□ -0.13
PDLIM1-201ENST00000329399 UPK1BO75841 260 aa14.24□□□□□ -0.13
PDLIM1-201ENST00000329399 B4GALT1P15291 398 aa14.24□□□□□ -0.13
PDLIM1-201ENST00000329399 IGFBP3P17936 291 aaPredicted RBP14.24□□□□□ -0.13
PDLIM1-201ENST00000329399 IL32P24001 234 aa14.24□□□□□ -0.13
PDLIM1-201ENST00000329399 THBS2P35442 1172 aa14.24□□□□□ -0.13
PDLIM1-201ENST00000329399 SOX2P48431 317 aa14.24□□□□□ -0.13
PDLIM1-201ENST00000329399 CAV3P56539 151 aa14.24□□□□□ -0.13
PDLIM1-201ENST00000329399 C1QTNF12Q5T7M4 302 aa14.24□□□□□ -0.13
PDLIM1-201ENST00000329399 TMEM53Q6P2H8 277 aa14.24□□□□□ -0.13
PDLIM1-201ENST00000329399 ANKRD16Q6P6B7 361 aa14.24□□□□□ -0.13
PDLIM1-201ENST00000329399 LRRTM1Q86UE6 522 aa14.24□□□□□ -0.13
PDLIM1-201ENST00000329399 NR2C2APQ86WQ0 139 aa14.24□□□□□ -0.13
PDLIM1-201ENST00000329399 LAX1Q8IWV1 398 aa14.24□□□□□ -0.13
PDLIM1-201ENST00000329399 RDH10Q8IZV5 341 aa14.24□□□□□ -0.13
PDLIM1-201ENST00000329399 STEAP2Q8NFT2 490 aa14.24□□□□□ -0.13
PDLIM1-201ENST00000329399 C15orf40Q8WUR7 153 aa14.24□□□□□ -0.13
PDLIM1-201ENST00000329399 ZNF837Q96EG3 531 aaPredicted RBP14.24□□□□□ -0.13
PDLIM1-201ENST00000329399 OR10A2Q9H208 303 aa14.24□□□□□ -0.13
PDLIM1-201ENST00000329399 MIXL1Q9H2W2 232 aa14.24□□□□□ -0.13
PDLIM1-201ENST00000329399 CYSLTR2Q9NS75 346 aa14.24□□□□□ -0.13
PDLIM1-201ENST00000329399 NPAP1Q9NZP6 1156 aa14.24□□□□□ -0.13
PDLIM1-201ENST00000329399 PLEKHA6Q9Y2H5 1048 aa14.24□□□□□ -0.13
PDLIM1-201ENST00000329399 USF3Q68DE3 2245 aa14.23□□□□□ -0.13
PDLIM1-201ENST00000329399 ARID1AO14497 2285 aa14.23□□□□□ -0.13
PDLIM1-201ENST00000329399 A0A1W2PPK0 400 aa14.23□□□□□ -0.13
PDLIM1-201ENST00000329399 J3QRK9 145 aa14.23□□□□□ -0.13
PDLIM1-201ENST00000329399 M0R135 149 aa14.23□□□□□ -0.13
PDLIM1-201ENST00000329399 DOK2O60496 412 aa14.23□□□□□ -0.13
PDLIM1-201ENST00000329399 NCR1O76036 304 aa14.23□□□□□ -0.13
PDLIM1-201ENST00000329399 ALX3O95076 343 aa14.23□□□□□ -0.13
PDLIM1-201ENST00000329399 IGLV3-1P01715 115 aa14.23□□□□□ -0.13
PDLIM1-201ENST00000329399 NR4A2P43354 598 aa14.23□□□□□ -0.13
PDLIM1-201ENST00000329399 PRKXP51817 358 aa14.23□□□□□ -0.13
PDLIM1-201ENST00000329399 DEFA1P59665 94 aa14.23□□□□□ -0.13
PDLIM1-201ENST00000329399 DEFA3P59666 94 aa14.23□□□□□ -0.13
PDLIM1-201ENST00000329399 ARF1P84077 181 aaKnown RBP14.23□□□□□ -0.13
PDLIM1-201ENST00000329399 RGS21Q2M5E4 152 aa14.23□□□□□ -0.13
PDLIM1-201ENST00000329399 PRSS45Q7RTY3 260 aa14.23□□□□□ -0.13
PDLIM1-201ENST00000329399 WDR31Q8NA23 367 aa14.23□□□□□ -0.13
PDLIM1-201ENST00000329399 PLPP7Q8NBV4 271 aa14.23□□□□□ -0.13
PDLIM1-201ENST00000329399 ZNF799Q96GE5 643 aa14.23□□□□□ -0.13
PDLIM1-201ENST00000329399 PGAM5Q96HS1 289 aa14.23□□□□□ -0.13
PDLIM1-201ENST00000329399 SOSTQ9BQB4 213 aa14.23□□□□□ -0.13
PDLIM1-201ENST00000329399 OR2H1Q9GZK4 316 aa14.23□□□□□ -0.13
PDLIM1-201ENST00000329399 AK6Q9Y3D8 172 aaKnown RBP14.23□□□□□ -0.13
PDLIM1-201ENST00000329399 UBL3O95164 117 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms