RNA–Protein interactions for RNA: ENST00000323668.11

TCOF1-201, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCOF1, Length 4,832 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-201ENST00000323668 PLXDC2Q6UX71 529 aa13.19□□□□□ -0.3
TCOF1-201ENST00000323668 NR2C2APQ86WQ0 139 aa13.19□□□□□ -0.3
TCOF1-201ENST00000323668 PRR18Q8N4B5 295 aa13.19□□□□□ -0.3
TCOF1-201ENST00000323668 FBXW5Q969U6 566 aa13.19□□□□□ -0.3
TCOF1-201ENST00000323668 MS4A7Q9GZW8 240 aaPredicted RBP13.19□□□□□ -0.3
TCOF1-201ENST00000323668 OIP5O43482 229 aa13.19□□□□□ -0.3
TCOF1-201ENST00000323668 FOXS1O43638 330 aa13.19□□□□□ -0.3
TCOF1-201ENST00000323668 GUSBP08236 651 aa13.19□□□□□ -0.3
TCOF1-201ENST00000323668 ZNF44P15621 663 aa13.19□□□□□ -0.3
TCOF1-201ENST00000323668 FAHD2BQ6P2I3 314 aaPredicted RBP13.19□□□□□ -0.3
TCOF1-201ENST00000323668 Q6ZS52 159 aa13.19□□□□□ -0.3
TCOF1-201ENST00000323668 LANCL3Q6ZV70 420 aa13.19□□□□□ -0.3
TCOF1-201ENST00000323668 RABEPKQ7Z6M1 372 aa13.19□□□□□ -0.3
TCOF1-201ENST00000323668 SUMF1Q8NBK3 374 aa13.19□□□□□ -0.3
TCOF1-201ENST00000323668 FAHD2AQ96GK7 314 aa13.19□□□□□ -0.3
TCOF1-201ENST00000323668 C20orf24Q9BUV8 137 aa13.19□□□□□ -0.3
TCOF1-201ENST00000323668 STRADBQ9C0K7 418 aa13.19□□□□□ -0.3
TCOF1-201ENST00000323668 DCTN6O00399 190 aa13.18□□□□□ -0.3
TCOF1-201ENST00000323668 NME2P1O60361 137 aa13.18□□□□□ -0.3
TCOF1-201ENST00000323668 GDF1P27539 372 aa13.18□□□□□ -0.3
TCOF1-201ENST00000323668 EFNB1P98172 346 aa13.18□□□□□ -0.3
TCOF1-201ENST00000323668 PJVKQ0ZLH3 352 aa13.18□□□□□ -0.3
TCOF1-201ENST00000323668 ECH1Q13011 328 aa13.18□□□□□ -0.3
TCOF1-201ENST00000323668 IL34Q6ZMJ4 242 aa13.18□□□□□ -0.3
TCOF1-201ENST00000323668 SFTPA2Q8IWL1 248 aa13.18□□□□□ -0.3
TCOF1-201ENST00000323668 LFNGQ8NES3 379 aa13.18□□□□□ -0.3
TCOF1-201ENST00000323668 ATOH1Q92858 354 aaPredicted RBP13.18□□□□□ -0.3
TCOF1-201ENST00000323668 GPX7Q96SL4 187 aaPredicted RBP13.18□□□□□ -0.3
TCOF1-201ENST00000323668 MENTQ9BUN1 341 aa13.18□□□□□ -0.3
TCOF1-201ENST00000323668 RAB18Q9NP72 206 aa13.18□□□□□ -0.3
TCOF1-201ENST00000323668 ZNF107Q9UII5 783 aaPredicted RBP13.18□□□□□ -0.3
TCOF1-201ENST00000323668 A0A1W2PQF6 199 aa13.18□□□□□ -0.3
TCOF1-201ENST00000323668 A6NLC8 198 aa13.18□□□□□ -0.3
TCOF1-201ENST00000323668 LRP3O75074 770 aa13.18□□□□□ -0.3
TCOF1-201ENST00000323668 MRPL33O75394 65 aaKnown RBP13.18□□□□□ -0.3
TCOF1-201ENST00000323668 HYAL1Q12794 435 aa13.18□□□□□ -0.3
TCOF1-201ENST00000323668 TMEM65Q6PI78 240 aa13.18□□□□□ -0.3
TCOF1-201ENST00000323668 AGBL5Q8NDL9 886 aa13.18□□□□□ -0.3
TCOF1-201ENST00000323668 LIPHQ8WWY8 451 aa13.18□□□□□ -0.3
TCOF1-201ENST00000323668 PSMF1Q92530 271 aa13.18□□□□□ -0.3
TCOF1-201ENST00000323668 CPNE4Q96A23 557 aaPredicted RBP13.18□□□□□ -0.3
TCOF1-201ENST00000323668 PIGQQ9BRB3 760 aa13.18□□□□□ -0.3
TCOF1-201ENST00000323668 SPACA1Q9HBV2 294 aa13.18□□□□□ -0.3
TCOF1-201ENST00000323668 TRBV5-5A0A0J9YX44 114 aa13.18□□□□□ -0.3
TCOF1-201ENST00000323668 ANKRD30BLA7E2S9 258 aa13.18□□□□□ -0.3
TCOF1-201ENST00000323668 E5RGE8 158 aa13.18□□□□□ -0.3
TCOF1-201ENST00000323668 OR2J2O76002 312 aa13.18□□□□□ -0.3
TCOF1-201ENST00000323668 ATG12O94817 140 aa13.18□□□□□ -0.3
TCOF1-201ENST00000323668 HBE1P02100 147 aa13.18□□□□□ -0.3
TCOF1-201ENST00000323668 FPR2P25090 351 aa13.18□□□□□ -0.3
TCOF1-201ENST00000323668 DUSP1P28562 367 aa13.18□□□□□ -0.3
TCOF1-201ENST00000323668 RAB5CP51148 216 aa13.18□□□□□ -0.3
TCOF1-201ENST00000323668 GAS1P54826 345 aa13.18□□□□□ -0.3
TCOF1-201ENST00000323668 MYBPHQ13203 477 aa13.18□□□□□ -0.3
TCOF1-201ENST00000323668 INPP5JQ15735 1006 aaPredicted RBP13.18□□□□□ -0.3
TCOF1-201ENST00000323668 ABHD17BQ5VST6 288 aa13.18□□□□□ -0.3
TCOF1-201ENST00000323668 CPEB2Q7Z5Q1 589 aaKnown RBP13.18□□□□□ -0.3
TCOF1-201ENST00000323668 OR4D6Q8NGJ1 314 aa13.18□□□□□ -0.3
TCOF1-201ENST00000323668 OR52H1Q8NGJ2 320 aa13.18□□□□□ -0.3
TCOF1-201ENST00000323668 ARHGAP5-AS1Q96IT6 56 aa13.18□□□□□ -0.3
TCOF1-201ENST00000323668 NSG2Q9Y328 171 aa13.18□□□□□ -0.3
TCOF1-201ENST00000323668 OR6C65A6NJZ3 312 aa13.18□□□□□ -0.3
TCOF1-201ENST00000323668 GLB1P16278 677 aa13.18□□□□□ -0.3
TCOF1-201ENST00000323668 ENPP1P22413 925 aa13.18□□□□□ -0.3
TCOF1-201ENST00000323668 CARD18P57730 90 aa13.18□□□□□ -0.3
TCOF1-201ENST00000323668 DCAF12L2Q5VW00 463 aa13.18□□□□□ -0.3
TCOF1-201ENST00000323668 CATSPERDQ86XM0 798 aa13.18□□□□□ -0.3
TCOF1-201ENST00000323668 ZSCAN4Q8NAM6 433 aaPredicted RBP13.18□□□□□ -0.3
TCOF1-201ENST00000323668 CTHRC1Q96CG8 243 aa13.18□□□□□ -0.3
TCOF1-201ENST00000323668 C12orf57Q99622 126 aa13.18□□□□□ -0.3
TCOF1-201ENST00000323668 SCN2AQ99250 2005 aa13.17□□□□□ -0.3
TCOF1-201ENST00000323668 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.17□□□□□ -0.3
TCOF1-201ENST00000323668 SHISA8B8ZZ34 492 aa13.17□□□□□ -0.3
TCOF1-201ENST00000323668 TNFSF12O43508 249 aa13.17□□□□□ -0.3
TCOF1-201ENST00000323668 UPK3AO75631 287 aa13.17□□□□□ -0.3
TCOF1-201ENST00000323668 GALNSP34059 522 aa13.17□□□□□ -0.3
TCOF1-201ENST00000323668 FAM109BQ6ICB4 259 aaPredicted RBP13.17□□□□□ -0.3
TCOF1-201ENST00000323668 KMT5CQ86Y97 462 aa13.17□□□□□ -0.3
TCOF1-201ENST00000323668 HDGFL3Q9Y3E1 203 aa13.17□□□□□ -0.3
TCOF1-201ENST00000323668 ASAH2BP0C7U1 165 aa13.17□□□□□ -0.3
TCOF1-201ENST00000323668 OR13C7P0DN81 318 aa13.17□□□□□ -0.3
TCOF1-201ENST00000323668 NOXO1Q8NFA2 376 aa13.17□□□□□ -0.3
TCOF1-201ENST00000323668 HAS2Q92819 552 aa13.17□□□□□ -0.3
TCOF1-201ENST00000323668 METTL12A8MUP2 240 aa13.17□□□□□ -0.3
TCOF1-201ENST00000323668 SFT2D2O95562 160 aa13.17□□□□□ -0.3
TCOF1-201ENST00000323668 IFI6P09912 130 aa13.17□□□□□ -0.3
TCOF1-201ENST00000323668 FAHP16930 419 aa13.17□□□□□ -0.3
TCOF1-201ENST00000323668 KIR3DL2P43630 455 aa13.17□□□□□ -0.3
TCOF1-201ENST00000323668 TLE4Q04727 773 aa13.17□□□□□ -0.3
TCOF1-201ENST00000323668 C9orf135Q5VTT2 229 aa13.17□□□□□ -0.3
TCOF1-201ENST00000323668 SLC25A42Q86VD7 318 aa13.17□□□□□ -0.3
TCOF1-201ENST00000323668 STPG2Q8N412 459 aa13.17□□□□□ -0.3
TCOF1-201ENST00000323668 TMEM217Q8N7C4 229 aa13.17□□□□□ -0.3
TCOF1-201ENST00000323668 ZNF784Q8NCA9 323 aaPredicted RBP13.17□□□□□ -0.3
TCOF1-201ENST00000323668 CPT1CQ8TCG5 803 aa13.17□□□□□ -0.3
TCOF1-201ENST00000323668 PP6455Q8WZ26 134 aa13.17□□□□□ -0.3
TCOF1-201ENST00000323668 NELFAQ9H3P2 528 aa13.17□□□□□ -0.3
TCOF1-201ENST00000323668 FBXO7Q9Y3I1 522 aa13.17□□□□□ -0.3
TCOF1-201ENST00000323668 RP1L1Q8IWN7 2480 aaPredicted RBP13.17□□□□□ -0.3
TCOF1-201ENST00000323668 UNC13CQ8NB66 2214 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms