RNA–Protein interactions for RNA: ENST00000273960.7

HERC6-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 1 (best) BASIC

Gene HERC6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-202ENST00000273960 ZNF587BE7ETH6 402 aa11.44□□□□□ -0.58
HERC6-202ENST00000273960 HIST1H2BKO60814 126 aa11.44□□□□□ -0.58
HERC6-202ENST00000273960 NXPH3O95157 252 aa11.44□□□□□ -0.58
HERC6-202ENST00000273960 RENP00797 406 aa11.44□□□□□ -0.58
HERC6-202ENST00000273960 HIST1H2BJP06899 126 aa11.44□□□□□ -0.58
HERC6-202ENST00000273960 HOXC4P09017 264 aaPredicted RBP11.44□□□□□ -0.58
HERC6-202ENST00000273960 HIST1H2BOP23527 126 aa11.44□□□□□ -0.58
HERC6-202ENST00000273960 CRABP1P29762 137 aa11.44□□□□□ -0.58
HERC6-202ENST00000273960 HIST1H2BBP33778 126 aa11.44□□□□□ -0.58
HERC6-202ENST00000273960 HIST1H2BDP58876 126 aa11.44□□□□□ -0.58
HERC6-202ENST00000273960 HIST1H2BCP62807 126 aa11.44□□□□□ -0.58
HERC6-202ENST00000273960 CYCSP99999 105 aaKnown RBP11.44□□□□□ -0.58
HERC6-202ENST00000273960 HIST2H2BEQ16778 126 aa11.44□□□□□ -0.58
HERC6-202ENST00000273960 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.44□□□□□ -0.58
HERC6-202ENST00000273960 ZNF574Q6ZN55 896 aaPredicted RBP11.44□□□□□ -0.58
HERC6-202ENST00000273960 NRSN1Q8IZ57 195 aa11.44□□□□□ -0.58
HERC6-202ENST00000273960 RCBTB1Q8NDN9 531 aa11.44□□□□□ -0.58
HERC6-202ENST00000273960 Q8WTZ3 238 aa11.44□□□□□ -0.58
HERC6-202ENST00000273960 HIST1H2BHQ93079 126 aa11.44□□□□□ -0.58
HERC6-202ENST00000273960 HIST1H2BNQ99877 126 aa11.44□□□□□ -0.58
HERC6-202ENST00000273960 HIST1H2BMQ99879 126 aa11.44□□□□□ -0.58
HERC6-202ENST00000273960 FLVCR1Q9Y5Y0 555 aa11.44□□□□□ -0.58
HERC6-202ENST00000273960 EREGO14944 169 aa11.43□□□□□ -0.58
HERC6-202ENST00000273960 HEXBP07686 556 aa11.43□□□□□ -0.58
HERC6-202ENST00000273960 COX5BP10606 129 aa11.43□□□□□ -0.58
HERC6-202ENST00000273960 SULT1A2P50226 295 aa11.43□□□□□ -0.58
HERC6-202ENST00000273960 TFF2Q03403 129 aa11.43□□□□□ -0.58
HERC6-202ENST00000273960 BATFQ16520 125 aa11.43□□□□□ -0.58
HERC6-202ENST00000273960 AWAT2Q6E213 333 aa11.43□□□□□ -0.58
HERC6-202ENST00000273960 CDC20BQ86Y33 519 aa11.43□□□□□ -0.58
HERC6-202ENST00000273960 ZNF595Q8IYB9 648 aa11.43□□□□□ -0.58
HERC6-202ENST00000273960 REV3LO60673 3130 aa11.43□□□□□ -0.58
HERC6-202ENST00000273960 LOC107986453A0A1B0GWG9 222 aa11.43□□□□□ -0.58
HERC6-202ENST00000273960 CCDC85CA6NKD9 419 aa11.43□□□□□ -0.58
HERC6-202ENST00000273960 NUDT19A8MXV4 375 aa11.43□□□□□ -0.58
HERC6-202ENST00000273960 CTSVO60911 334 aa11.43□□□□□ -0.58
HERC6-202ENST00000273960 HKR1P10072 659 aa11.43□□□□□ -0.58
HERC6-202ENST00000273960 ZNF25P17030 456 aaPredicted RBP11.43□□□□□ -0.58
HERC6-202ENST00000273960 EMP2P54851 167 aa11.43□□□□□ -0.58
HERC6-202ENST00000273960 NAAAQ02083 359 aa11.43□□□□□ -0.58
HERC6-202ENST00000273960 PLXDC2Q6UX71 529 aa11.43□□□□□ -0.58
HERC6-202ENST00000273960 CPEB2Q7Z5Q1 589 aaKnown RBP11.43□□□□□ -0.58
HERC6-202ENST00000273960 TMEM68Q96MH6 324 aa11.43□□□□□ -0.58
HERC6-202ENST00000273960 TSPAN32Q96QS1 320 aa11.43□□□□□ -0.58
HERC6-202ENST00000273960 OR11A1Q9GZK7 315 aa11.43□□□□□ -0.58
HERC6-202ENST00000273960 K7EQS6 105 aa11.43□□□□□ -0.58
HERC6-202ENST00000273960 RAB27BO00194 218 aa11.43□□□□□ -0.58
HERC6-202ENST00000273960 AMY2BP19961 511 aa11.43□□□□□ -0.58
HERC6-202ENST00000273960 DRD3P35462 400 aa11.43□□□□□ -0.58
HERC6-202ENST00000273960 GABRA4P48169 554 aa11.43□□□□□ -0.58
HERC6-202ENST00000273960 CCL20P78556 96 aa11.43□□□□□ -0.58
HERC6-202ENST00000273960 ZNF776Q68DI1 518 aaPredicted RBP11.43□□□□□ -0.58
HERC6-202ENST00000273960 ZFP62Q8NB50 900 aaPredicted RBP11.43□□□□□ -0.58
HERC6-202ENST00000273960 PACRGQ96M98 296 aaPredicted RBP11.43□□□□□ -0.58
HERC6-202ENST00000273960 ZNF701Q9NV72 531 aaPredicted RBP11.43□□□□□ -0.58
HERC6-202ENST00000273960 DAPP1Q9UN19 280 aa11.43□□□□□ -0.58
HERC6-202ENST00000273960 SMCO3A2RU48 225 aa11.42□□□□□ -0.58
HERC6-202ENST00000273960 SOCS1O15524 211 aa11.42□□□□□ -0.58
HERC6-202ENST00000273960 S1PR1P21453 382 aa11.42□□□□□ -0.58
HERC6-202ENST00000273960 SNCAP37840 140 aa11.42□□□□□ -0.58
HERC6-202ENST00000273960 SLC17A1Q14916 467 aa11.42□□□□□ -0.58
HERC6-202ENST00000273960 TMEM128Q5BJH2 165 aa11.42□□□□□ -0.58
HERC6-202ENST00000273960 SLC35D3Q5M8T2 416 aa11.42□□□□□ -0.58
HERC6-202ENST00000273960 OR10AD1Q8NGE0 317 aa11.42□□□□□ -0.58
HERC6-202ENST00000273960 ASB13Q8WXK3 278 aa11.42□□□□□ -0.58
HERC6-202ENST00000273960 TOMM40LQ969M1 308 aa11.42□□□□□ -0.58
HERC6-202ENST00000273960 TMEM230Q96A57 120 aa11.42□□□□□ -0.58
HERC6-202ENST00000273960 NMNAT2Q9BZQ4 307 aa11.42□□□□□ -0.58
HERC6-202ENST00000273960 SLC5A6Q9Y289 635 aa11.42□□□□□ -0.58
HERC6-202ENST00000273960 SPACA6W5XKT8 324 aa11.42□□□□□ -0.58
HERC6-202ENST00000273960 FAM157AC9JC47 383 aa11.42□□□□□ -0.58
HERC6-202ENST00000273960 IFNL4K9M1U5 179 aa11.42□□□□□ -0.58
HERC6-202ENST00000273960 EML2O95834 649 aa11.42□□□□□ -0.58
HERC6-202ENST00000273960 MBP02144 154 aa11.42□□□□□ -0.58
HERC6-202ENST00000273960 CX3CR1P49238 355 aa11.42□□□□□ -0.58
HERC6-202ENST00000273960 DHPSP49366 369 aaPredicted RBP11.42□□□□□ -0.58
HERC6-202ENST00000273960 ADPRHP54922 357 aa11.42□□□□□ -0.58
HERC6-202ENST00000273960 ERVFRD-1P60508 538 aa11.42□□□□□ -0.58
HERC6-202ENST00000273960 SPCS3P61009 180 aa11.42□□□□□ -0.58
HERC6-202ENST00000273960 RNF4P78317 190 aa11.42□□□□□ -0.58
HERC6-202ENST00000273960 DMWDQ09019 674 aa11.42□□□□□ -0.58
HERC6-202ENST00000273960 ZNHIT3Q15649 155 aaPredicted RBP11.42□□□□□ -0.58
HERC6-202ENST00000273960 GGNBP1Q5YKI7 109 aa11.42□□□□□ -0.58
HERC6-202ENST00000273960 TERB2Q8NHR7 220 aa11.42□□□□□ -0.58
HERC6-202ENST00000273960 PATE1Q8WXA2 126 aa11.42□□□□□ -0.58
HERC6-202ENST00000273960 METTL21AQ8WXB1 218 aa11.42□□□□□ -0.58
HERC6-202ENST00000273960 RLN3Q8WXF3 142 aa11.42□□□□□ -0.58
HERC6-202ENST00000273960 RAB7BQ96AH8 199 aa11.42□□□□□ -0.58
HERC6-202ENST00000273960 FOXQ1Q9C009 403 aa11.42□□□□□ -0.58
HERC6-202ENST00000273960 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.42□□□□□ -0.58
HERC6-202ENST00000273960 B3GALT1Q9Y5Z6 326 aa11.42□□□□□ -0.58
HERC6-202ENST00000273960 CDC14CA4D256 554 aa11.41□□□□□ -0.58
HERC6-202ENST00000273960 OR5H15A6NDH6 313 aa11.41□□□□□ -0.58
HERC6-202ENST00000273960 OR5H1A6NKK0 313 aa11.41□□□□□ -0.58
HERC6-202ENST00000273960 PGA4P0DJD7 388 aa11.41□□□□□ -0.58
HERC6-202ENST00000273960 PGA5P0DJD9 388 aa11.41□□□□□ -0.58
HERC6-202ENST00000273960 CSNK2A1P68400 391 aaPredicted RBP11.41□□□□□ -0.58
HERC6-202ENST00000273960 HNF4GQ14541 408 aa11.41□□□□□ -0.58
HERC6-202ENST00000273960 RHEBQ15382 184 aa11.41□□□□□ -0.58
HERC6-202ENST00000273960 TSPO2Q5TGU0 170 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms