RNA–Protein interactions for RNA: ENST00000237289.8

TNFAIP3-201, Transcript of TNF alpha induced protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP3, Length 4,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-201ENST00000237289 MUL1Q969V5 352 aa9.62□□□□□ -0.87
TNFAIP3-201ENST00000237289 PPP1R14AQ96A00 147 aa9.62□□□□□ -0.87
TNFAIP3-201ENST00000237289 DCUN1D5Q9BTE7 237 aa9.62□□□□□ -0.87
TNFAIP3-201ENST00000237289 UFSP2Q9NUQ7 469 aa9.62□□□□□ -0.87
TNFAIP3-201ENST00000237289 FRRS1LQ9P0K9 344 aa9.62□□□□□ -0.87
TNFAIP3-201ENST00000237289 MED12LQ86YW9 2145 aa9.62□□□□□ -0.87
TNFAIP3-201ENST00000237289 IGHV3-64DA0A0J9YX35 117 aa9.62□□□□□ -0.87
TNFAIP3-201ENST00000237289 IGKV3-15P01624 115 aa9.62□□□□□ -0.87
TNFAIP3-201ENST00000237289 BDKRB2P30411 391 aa9.62□□□□□ -0.87
TNFAIP3-201ENST00000237289 TPBGQ13641 420 aa9.62□□□□□ -0.87
TNFAIP3-201ENST00000237289 RSU1Q15404 277 aa9.62□□□□□ -0.87
TNFAIP3-201ENST00000237289 SYT6Q5T7P8 510 aaPredicted RBP9.62□□□□□ -0.87
TNFAIP3-201ENST00000237289 USP43Q70EL4 1123 aa9.62□□□□□ -0.87
TNFAIP3-201ENST00000237289 PP6455Q8WZ26 134 aa9.62□□□□□ -0.87
TNFAIP3-201ENST00000237289 ADAT1Q9BUB4 502 aaKnown RBP9.62□□□□□ -0.87
TNFAIP3-201ENST00000237289 ZCCHC4Q9H5U6 513 aa9.62□□□□□ -0.87
TNFAIP3-201ENST00000237289 NOX4Q9NPH5 578 aa9.62□□□□□ -0.87
TNFAIP3-201ENST00000237289 B3GNT2Q9NY97 397 aa9.62□□□□□ -0.87
TNFAIP3-201ENST00000237289 CPEP16870 476 aa9.62□□□□□ -0.87
TNFAIP3-201ENST00000237289 THBS2P35442 1172 aa9.62□□□□□ -0.87
TNFAIP3-201ENST00000237289 ZNF92Q03936 586 aa9.62□□□□□ -0.87
TNFAIP3-201ENST00000237289 PCK2Q16822 640 aa9.62□□□□□ -0.87
TNFAIP3-201ENST00000237289 MKXQ8IYA7 352 aa9.62□□□□□ -0.87
TNFAIP3-201ENST00000237289 RTTNQ86VV8 2226 aa9.62□□□□□ -0.87
TNFAIP3-201ENST00000237289 A0A0U1RQV5 110 aa9.62□□□□□ -0.87
TNFAIP3-201ENST00000237289 DPRXA6NFQ7 191 aa9.62□□□□□ -0.87
TNFAIP3-201ENST00000237289 SMPD2O60906 423 aa9.62□□□□□ -0.87
TNFAIP3-201ENST00000237289 RAF1P04049 648 aa9.62□□□□□ -0.87
TNFAIP3-201ENST00000237289 CAPZA1P52907 286 aa9.62□□□□□ -0.87
TNFAIP3-201ENST00000237289 TNFAIP6P98066 277 aaPredicted RBP9.62□□□□□ -0.87
TNFAIP3-201ENST00000237289 DMRTC2Q8IXT2 367 aaPredicted RBP9.62□□□□□ -0.87
TNFAIP3-201ENST00000237289 ZSCAN4Q8NAM6 433 aaPredicted RBP9.62□□□□□ -0.87
TNFAIP3-201ENST00000237289 SGK3Q96BR1 496 aa9.62□□□□□ -0.87
TNFAIP3-201ENST00000237289 TIMD4Q96H15 378 aa9.62□□□□□ -0.87
TNFAIP3-201ENST00000237289 FUNDC2Q9BWH2 189 aa9.62□□□□□ -0.87
TNFAIP3-201ENST00000237289 JAM3Q9BX67 310 aa9.62□□□□□ -0.87
TNFAIP3-201ENST00000237289 C6orf62Q9GZU0 229 aaPredicted RBP9.62□□□□□ -0.87
TNFAIP3-201ENST00000237289 OR51E2Q9H255 320 aa9.62□□□□□ -0.87
TNFAIP3-201ENST00000237289 PCDHB10Q9UN67 800 aa9.62□□□□□ -0.87
TNFAIP3-201ENST00000237289 B9A039 149 aa9.61□□□□□ -0.87
TNFAIP3-201ENST00000237289 ZNF14P17017 642 aaPredicted RBP9.61□□□□□ -0.87
TNFAIP3-201ENST00000237289 RAB3BP20337 219 aa9.61□□□□□ -0.87
TNFAIP3-201ENST00000237289 FAM189A2Q15884 450 aa9.61□□□□□ -0.87
TNFAIP3-201ENST00000237289 SNAI3Q3KNW1 292 aa9.61□□□□□ -0.87
TNFAIP3-201ENST00000237289 NCMAPQ5T1S8 102 aa9.61□□□□□ -0.87
TNFAIP3-201ENST00000237289 FOXRED1Q96CU9 486 aaPredicted RBP9.61□□□□□ -0.87
TNFAIP3-201ENST00000237289 GAL3ST1Q99999 423 aa9.61□□□□□ -0.87
TNFAIP3-201ENST00000237289 FKBP14Q9NWM8 211 aa9.61□□□□□ -0.87
TNFAIP3-201ENST00000237289 PURGQ9UJV8 347 aaKnown RBP9.61□□□□□ -0.87
TNFAIP3-201ENST00000237289 MPC1Q9Y5U8 109 aa9.61□□□□□ -0.87
TNFAIP3-201ENST00000237289 ICE1Q9Y2F5 2266 aa9.61□□□□□ -0.87
TNFAIP3-201ENST00000237289 PLPP2O43688 288 aa9.61□□□□□ -0.87
TNFAIP3-201ENST00000237289 RBP2P50120 134 aa9.61□□□□□ -0.87
TNFAIP3-201ENST00000237289 BLMHQ13867 455 aa9.61□□□□□ -0.87
TNFAIP3-201ENST00000237289 GK2Q14410 553 aaPredicted RBP9.61□□□□□ -0.87
TNFAIP3-201ENST00000237289 AWAT2Q6E213 333 aa9.61□□□□□ -0.87
TNFAIP3-201ENST00000237289 SEZ6L2Q6UXD5 910 aa9.61□□□□□ -0.87
TNFAIP3-201ENST00000237289 OPALINQ96PE5 141 aa9.61□□□□□ -0.87
TNFAIP3-201ENST00000237289 DHRS9Q9BPW9 319 aa9.61□□□□□ -0.87
TNFAIP3-201ENST00000237289 MSL2Q9HCI7 577 aa9.61□□□□□ -0.87
TNFAIP3-201ENST00000237289 TMEM138Q9NPI0 162 aa9.61□□□□□ -0.87
TNFAIP3-201ENST00000237289 JKAMPQ9P055 326 aa9.61□□□□□ -0.87
TNFAIP3-201ENST00000237289 AK6Q9Y3D8 172 aaKnown RBP9.61□□□□□ -0.87
TNFAIP3-201ENST00000237289 FREM1Q5H8C1 2179 aa9.61□□□□□ -0.87
TNFAIP3-201ENST00000237289 SMIM30A4D0T7 59 aa9.61□□□□□ -0.87
TNFAIP3-201ENST00000237289 TRAPPC2LH3BP13 241 aa9.61□□□□□ -0.87
TNFAIP3-201ENST00000237289 TTRP02766 147 aa9.61□□□□□ -0.87
TNFAIP3-201ENST00000237289 ZNF573Q86YE8 665 aa9.61□□□□□ -0.87
TNFAIP3-201ENST00000237289 C1orf87Q8N0U7 546 aa9.61□□□□□ -0.87
TNFAIP3-201ENST00000237289 TNFAIP8L1Q8WVP5 186 aa9.61□□□□□ -0.87
TNFAIP3-201ENST00000237289 HPS1Q92902 700 aa9.61□□□□□ -0.87
TNFAIP3-201ENST00000237289 TECTBQ96PL2 329 aa9.61□□□□□ -0.87
TNFAIP3-201ENST00000237289 CGGBP1Q9UFW8 167 aaPredicted RBP9.61□□□□□ -0.87
TNFAIP3-201ENST00000237289 NCKAP5O14513 1909 aa9.61□□□□□ -0.87
TNFAIP3-201ENST00000237289 ABCA4P78363 2273 aa9.6□□□□□ -0.87
TNFAIP3-201ENST00000237289 OR4C45A6NMZ5 311 aa9.6□□□□□ -0.87
TNFAIP3-201ENST00000237289 SLC22A1O15245 554 aa9.6□□□□□ -0.87
TNFAIP3-201ENST00000237289 PNPP00491 289 aa9.6□□□□□ -0.87
TNFAIP3-201ENST00000237289 VBP1P61758 197 aa9.6□□□□□ -0.87
TNFAIP3-201ENST00000237289 SCN1BQ07699 218 aa9.6□□□□□ -0.87
TNFAIP3-201ENST00000237289 PRDX4Q13162 271 aa9.6□□□□□ -0.87
TNFAIP3-201ENST00000237289 LAIR2Q6ISS4 152 aa9.6□□□□□ -0.87
TNFAIP3-201ENST00000237289 OR13C5Q8NGS8 318 aa9.6□□□□□ -0.87
TNFAIP3-201ENST00000237289 DGCR14Q96DF8 476 aaKnown RBP9.6□□□□□ -0.87
TNFAIP3-201ENST00000237289 C1QTNF5Q9BXJ0 243 aa9.6□□□□□ -0.87
TNFAIP3-201ENST00000237289 FAM206AQ9NX38 181 aa9.6□□□□□ -0.87
TNFAIP3-201ENST00000237289 OGG1O15527 345 aa9.6□□□□□ -0.87
TNFAIP3-201ENST00000237289 RORCP51449 518 aa9.6□□□□□ -0.87
TNFAIP3-201ENST00000237289 OR1M1Q8NGA1 313 aa9.6□□□□□ -0.87
TNFAIP3-201ENST00000237289 DCSTAMPQ9H295 470 aa9.6□□□□□ -0.87
TNFAIP3-201ENST00000237289 TAS2R4Q9NYW5 299 aa9.6□□□□□ -0.87
TNFAIP3-201ENST00000237289 DSPP15924 2871 aaKnown RBP9.6□□□□□ -0.87
TNFAIP3-201ENST00000237289 DPPA5A6NC42 116 aa9.6□□□□□ -0.87
TNFAIP3-201ENST00000237289 H3BSA7 217 aa9.6□□□□□ -0.87
TNFAIP3-201ENST00000237289 HTR3BO95264 441 aa9.6□□□□□ -0.87
TNFAIP3-201ENST00000237289 SSTR2P30874 369 aa9.6□□□□□ -0.87
TNFAIP3-201ENST00000237289 CHST4Q8NCG5 386 aa9.6□□□□□ -0.87
TNFAIP3-201ENST00000237289 OR10S1Q8NGN2 331 aa9.6□□□□□ -0.87
TNFAIP3-201ENST00000237289 RFT1Q96AA3 541 aa9.6□□□□□ -0.87
TNFAIP3-201ENST00000237289 ZNF275Q9NSD4 429 aaPredicted RBP9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms