RNA–Protein interactions for RNA: ENST00000035307.6

CHPF2-201, Transcript of chondroitin polymerizing factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHPF2, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-201ENST00000035307 OR5L1Q8NGL2 311 aa10.74□□□□□ -0.69
CHPF2-201ENST00000035307 FAM131CQ96AQ9 280 aa10.74□□□□□ -0.69
CHPF2-201ENST00000035307 ZNF799Q96GE5 643 aa10.74□□□□□ -0.69
CHPF2-201ENST00000035307 MARVELD1Q9BSK0 173 aa10.74□□□□□ -0.69
CHPF2-201ENST00000035307 UCK1Q9HA47 277 aa10.74□□□□□ -0.69
CHPF2-201ENST00000035307 ZMIZ1Q9ULJ6 1067 aa10.74□□□□□ -0.69
CHPF2-201ENST00000035307 FOXJ3Q9UPW0 622 aa10.74□□□□□ -0.69
CHPF2-201ENST00000035307 R4GMQ9 66 aa10.74□□□□□ -0.69
CHPF2-201ENST00000035307 ADAMTS9Q9P2N4 1935 aa10.73□□□□□ -0.69
CHPF2-201ENST00000035307 OR2M5A3KFT3 312 aa10.73□□□□□ -0.69
CHPF2-201ENST00000035307 PRR19A6NJB7 356 aa10.73□□□□□ -0.69
CHPF2-201ENST00000035307 H7C2Y5 167 aa10.73□□□□□ -0.69
CHPF2-201ENST00000035307 SGCEO43556 437 aa10.73□□□□□ -0.69
CHPF2-201ENST00000035307 ALX3O95076 343 aa10.73□□□□□ -0.69
CHPF2-201ENST00000035307 OR4E1P0C645 316 aa10.73□□□□□ -0.69
CHPF2-201ENST00000035307 PVALBP20472 110 aaPredicted RBP10.73□□□□□ -0.69
CHPF2-201ENST00000035307 SLC6A1P30531 599 aa10.73□□□□□ -0.69
CHPF2-201ENST00000035307 PPIAP62937 165 aaKnown RBP10.73□□□□□ -0.69
CHPF2-201ENST00000035307 IKZF1Q13422 519 aa10.73□□□□□ -0.69
CHPF2-201ENST00000035307 CLINT1Q14677 625 aa10.73□□□□□ -0.69
CHPF2-201ENST00000035307 IAH1Q2TAA2 248 aaPredicted RBP10.73□□□□□ -0.69
CHPF2-201ENST00000035307 TMUB2Q71RG4 321 aa10.73□□□□□ -0.69
CHPF2-201ENST00000035307 PNPLA5Q7Z6Z6 429 aaPredicted RBP10.73□□□□□ -0.69
CHPF2-201ENST00000035307 TMED6Q8WW62 240 aa10.73□□□□□ -0.69
CHPF2-201ENST00000035307 FER1L6-AS2Q96M78 137 aa10.73□□□□□ -0.69
CHPF2-201ENST00000035307 TMPRSS13Q9BYE2 586 aa10.73□□□□□ -0.69
CHPF2-201ENST00000035307 OR5H15A6NDH6 313 aa10.73□□□□□ -0.69
CHPF2-201ENST00000035307 KCNAB3O43448 404 aa10.73□□□□□ -0.69
CHPF2-201ENST00000035307 LMX1BO60663 402 aa10.73□□□□□ -0.69
CHPF2-201ENST00000035307 PTP4A3O75365 173 aa10.73□□□□□ -0.69
CHPF2-201ENST00000035307 RRASP10301 218 aa10.73□□□□□ -0.69
CHPF2-201ENST00000035307 EFNA3P52797 238 aa10.73□□□□□ -0.69
CHPF2-201ENST00000035307 EIF5AP63241 154 aaKnown RBP10.73□□□□□ -0.69
CHPF2-201ENST00000035307 MC2RQ01718 297 aa10.73□□□□□ -0.69
CHPF2-201ENST00000035307 KRBOX4Q5JUW0 171 aa10.73□□□□□ -0.69
CHPF2-201ENST00000035307 CDCP2Q5VXM1 449 aa10.73□□□□□ -0.69
CHPF2-201ENST00000035307 APCDD1LQ8NCL9 501 aa10.73□□□□□ -0.69
CHPF2-201ENST00000035307 OR4D10Q8NGI6 311 aa10.73□□□□□ -0.69
CHPF2-201ENST00000035307 SUCNR1Q9BXA5 334 aa10.73□□□□□ -0.69
CHPF2-201ENST00000035307 RAB22AQ9UL26 194 aa10.73□□□□□ -0.69
CHPF2-201ENST00000035307 KIAA2026Q5HYC2 2103 aa10.73□□□□□ -0.69
CHPF2-201ENST00000035307 ABCA1O95477 2261 aa10.73□□□□□ -0.69
CHPF2-201ENST00000035307 APOC1P02654 83 aa10.73□□□□□ -0.69
CHPF2-201ENST00000035307 CAMLGP49069 296 aa10.73□□□□□ -0.69
CHPF2-201ENST00000035307 INSM1Q01101 510 aaPredicted RBP10.73□□□□□ -0.69
CHPF2-201ENST00000035307 HACD4Q5VWC8 232 aa10.73□□□□□ -0.69
CHPF2-201ENST00000035307 MUC20Q8N307 709 aaPredicted RBP10.73□□□□□ -0.69
CHPF2-201ENST00000035307 ZSCAN1Q8NBB4 408 aa10.73□□□□□ -0.69
CHPF2-201ENST00000035307 CCDC54Q8NEL0 328 aa10.73□□□□□ -0.69
CHPF2-201ENST00000035307 GJC3Q8NFK1 279 aa10.73□□□□□ -0.69
CHPF2-201ENST00000035307 OR11H7Q8NGC8 314 aa10.73□□□□□ -0.69
CHPF2-201ENST00000035307 OR56B1Q8NGI3 324 aa10.73□□□□□ -0.69
CHPF2-201ENST00000035307 APOBEC4Q8WW27 367 aaKnown RBP10.73□□□□□ -0.69
CHPF2-201ENST00000035307 LIPHQ8WWY8 451 aa10.73□□□□□ -0.69
CHPF2-201ENST00000035307 PHYHIPQ92561 330 aa10.73□□□□□ -0.69
CHPF2-201ENST00000035307 ZNF764Q96H86 408 aaPredicted RBP10.73□□□□□ -0.69
CHPF2-201ENST00000035307 SF3B6Q9Y3B4 125 aaKnown RBP10.73□□□□□ -0.69
CHPF2-201ENST00000035307 MED19A0JLT2 244 aaPredicted RBP10.72□□□□□ -0.69
CHPF2-201ENST00000035307 GJE1A6NN92 205 aa10.72□□□□□ -0.69
CHPF2-201ENST00000035307 SLC17A2O00624 439 aa10.72□□□□□ -0.69
CHPF2-201ENST00000035307 ITGB2P05107 769 aa10.72□□□□□ -0.69
CHPF2-201ENST00000035307 GALNSP34059 522 aa10.72□□□□□ -0.69
CHPF2-201ENST00000035307 THBS2P35442 1172 aa10.72□□□□□ -0.69
CHPF2-201ENST00000035307 EGR3Q06889 387 aa10.72□□□□□ -0.69
CHPF2-201ENST00000035307 PCK2Q16822 640 aa10.72□□□□□ -0.69
CHPF2-201ENST00000035307 SP6Q3SY56 376 aa10.72□□□□□ -0.69
CHPF2-201ENST00000035307 ESCO2Q56NI9 601 aa10.72□□□□□ -0.69
CHPF2-201ENST00000035307 SPATA46Q5T0L3 261 aa10.72□□□□□ -0.69
CHPF2-201ENST00000035307 GPR157Q5UAW9 335 aa10.72□□□□□ -0.69
CHPF2-201ENST00000035307 MRGPREQ86SM8 312 aa10.72□□□□□ -0.69
CHPF2-201ENST00000035307 MAML2Q8IZL2 1156 aaPredicted RBP10.72□□□□□ -0.69
CHPF2-201ENST00000035307 TMEM217Q8N7C4 229 aa10.72□□□□□ -0.69
CHPF2-201ENST00000035307 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.72□□□□□ -0.69
CHPF2-201ENST00000035307 ELF5Q9UKW6 265 aaPredicted RBP10.72□□□□□ -0.69
CHPF2-201ENST00000035307 MCTS1Q9ULC4 181 aaKnown RBP10.72□□□□□ -0.69
CHPF2-201ENST00000035307 KLK2P20151 261 aa10.72□□□□□ -0.69
CHPF2-201ENST00000035307 SERPINF1P36955 418 aa10.72□□□□□ -0.69
CHPF2-201ENST00000035307 RBM39Q14498 530 aaKnown RBP10.72□□□□□ -0.69
CHPF2-201ENST00000035307 GSG1Q2KHT4 349 aa10.72□□□□□ -0.69
CHPF2-201ENST00000035307 EMC4Q5J8M3 183 aa10.72□□□□□ -0.69
CHPF2-201ENST00000035307 FAM209AQ5JX71 171 aa10.72□□□□□ -0.69
CHPF2-201ENST00000035307 LSMEM1Q8N8F7 131 aa10.72□□□□□ -0.69
CHPF2-201ENST00000035307 ADIPOR1Q96A54 375 aa10.72□□□□□ -0.69
CHPF2-201ENST00000035307 ZC3HAV1LQ96H79 300 aaKnown RBP10.72□□□□□ -0.69
CHPF2-201ENST00000035307 CHST6Q9GZX3 395 aa10.72□□□□□ -0.69
CHPF2-201ENST00000035307 B3GALT5Q9Y2C3 310 aa10.72□□□□□ -0.69
CHPF2-201ENST00000035307 TMEM272A0A1B0GTI8 110 aa10.72□□□□□ -0.69
CHPF2-201ENST00000035307 OR4C45A6NMZ5 311 aa10.72□□□□□ -0.69
CHPF2-201ENST00000035307 TRAPPC2P0DI81 140 aa10.72□□□□□ -0.69
CHPF2-201ENST00000035307 TRAPPC2BP0DI82 140 aa10.72□□□□□ -0.69
CHPF2-201ENST00000035307 NAGAP17050 411 aa10.72□□□□□ -0.69
CHPF2-201ENST00000035307 NAT1P18440 290 aa10.72□□□□□ -0.69
CHPF2-201ENST00000035307 TUBG1P23258 451 aa10.72□□□□□ -0.69
CHPF2-201ENST00000035307 MAGEA5P43359 124 aa10.72□□□□□ -0.69
CHPF2-201ENST00000035307 GALNT16Q8N428 558 aa10.72□□□□□ -0.69
CHPF2-201ENST00000035307 RDH5Q92781 318 aa10.72□□□□□ -0.69
CHPF2-201ENST00000035307 NICN1Q9BSH3 213 aa10.72□□□□□ -0.69
CHPF2-201ENST00000035307 ST6GALNAC2Q9UJ37 374 aa10.72□□□□□ -0.69
CHPF2-201ENST00000035307 RALYQ9UKM9 306 aaKnown RBP10.72□□□□□ -0.69
CHPF2-201ENST00000035307 NUP210Q8TEM1 1887 aaPredicted RBP10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms