RNA–Protein interactions for RNA: ENST00000639561.1

ATRIP-208, Transcript of ATR interacting protein, humanhuman

TSL 2

Gene ATRIP, Length 2,376 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRIP-208ENST00000639561 MSR1P21757 451 aa12.16□□□□□ -0.46
ATRIP-208ENST00000639561 NTF4P34130 210 aa12.16□□□□□ -0.46
ATRIP-208ENST00000639561 RCVRNP35243 200 aa12.16□□□□□ -0.46
ATRIP-208ENST00000639561 GNALP38405 381 aa12.16□□□□□ -0.46
ATRIP-208ENST00000639561 STARP49675 285 aa12.16□□□□□ -0.46
ATRIP-208ENST00000639561 SUCLG1P53597 346 aaKnown RBP12.16□□□□□ -0.46
ATRIP-208ENST00000639561 RAG2P55895 527 aa12.16□□□□□ -0.46
ATRIP-208ENST00000639561 ENDOGQ14249 297 aaKnown RBP12.16□□□□□ -0.46
ATRIP-208ENST00000639561 ZNF169Q14929 603 aaPredicted RBP12.16□□□□□ -0.46
ATRIP-208ENST00000639561 TAF13Q15543 124 aa12.16□□□□□ -0.46
ATRIP-208ENST00000639561 WIPI1Q5MNZ9 446 aaPredicted RBP12.16□□□□□ -0.46
ATRIP-208ENST00000639561 FOXL2NBQ6ZUU3 175 aa12.16□□□□□ -0.46
ATRIP-208ENST00000639561 ADGRE4PQ86SQ3 457 aa12.16□□□□□ -0.46
ATRIP-208ENST00000639561 CISD2Q8N5K1 135 aaKnown RBP12.16□□□□□ -0.46
ATRIP-208ENST00000639561 OR11H7Q8NGC8 314 aa12.16□□□□□ -0.46
ATRIP-208ENST00000639561 OR52N4Q8NGI2 321 aa12.16□□□□□ -0.46
ATRIP-208ENST00000639561 OR51J1Q9H342 316 aa12.16□□□□□ -0.46
ATRIP-208ENST00000639561 NELFAQ9H3P2 528 aa12.16□□□□□ -0.46
ATRIP-208ENST00000639561 NIPAL2Q9H841 368 aa12.16□□□□□ -0.46
ATRIP-208ENST00000639561 CNTD2Q9H8S5 307 aa12.16□□□□□ -0.46
ATRIP-208ENST00000639561 BEX1Q9HBH7 125 aa12.16□□□□□ -0.46
ATRIP-208ENST00000639561 RYDENQ9NUL5 291 aaKnown RBP12.16□□□□□ -0.46
ATRIP-208ENST00000639561 ING3Q9NXR8 418 aa12.16□□□□□ -0.46
ATRIP-208ENST00000639561 SETXQ7Z333 2677 aaKnown RBP12.16□□□□□ -0.46
ATRIP-208ENST00000639561 C5orf63A6NC05 138 aa12.16□□□□□ -0.46
ATRIP-208ENST00000639561 YES1P07947 543 aa12.16□□□□□ -0.46
ATRIP-208ENST00000639561 NR2C1P13056 603 aa12.16□□□□□ -0.46
ATRIP-208ENST00000639561 PSMB1P20618 241 aaKnown RBP12.16□□□□□ -0.46
ATRIP-208ENST00000639561 BDKRB2P30411 391 aa12.16□□□□□ -0.46
ATRIP-208ENST00000639561 CX3CR1P49238 355 aa12.16□□□□□ -0.46
ATRIP-208ENST00000639561 CLDN15P56746 228 aa12.16□□□□□ -0.46
ATRIP-208ENST00000639561 LSM6P62312 80 aaKnown RBP12.16□□□□□ -0.46
ATRIP-208ENST00000639561 SRSF1Q07955 248 aaKnown RBP eCLIP12.16□□□□□ -0.46
ATRIP-208ENST00000639561 ESPL1Q14674 2120 aa12.16□□□□□ -0.46
ATRIP-208ENST00000639561 ELFN2Q5R3F8 820 aa12.16□□□□□ -0.46
ATRIP-208ENST00000639561 ZNF529Q6P280 563 aa12.16□□□□□ -0.46
ATRIP-208ENST00000639561 ABHD12BQ7Z5M8 362 aaPredicted RBP12.16□□□□□ -0.46
ATRIP-208ENST00000639561 ADGRG7Q96K78 797 aa12.16□□□□□ -0.46
ATRIP-208ENST00000639561 SFXN2Q96NB2 322 aa12.16□□□□□ -0.46
ATRIP-208ENST00000639561 MED28Q9H204 178 aa12.16□□□□□ -0.46
ATRIP-208ENST00000639561 ASF1BQ9NVP2 202 aa12.16□□□□□ -0.46
ATRIP-208ENST00000639561 LRFN1Q9P244 771 aa12.16□□□□□ -0.46
ATRIP-208ENST00000639561 A0A1B0GVI7 797 aa12.15□□□□□ -0.46
ATRIP-208ENST00000639561 NAP1L6A6NFF2 107 aa12.15□□□□□ -0.46
ATRIP-208ENST00000639561 DHHO43323 396 aa12.15□□□□□ -0.46
ATRIP-208ENST00000639561 TRAPPC6AO75865 159 aa12.15□□□□□ -0.46
ATRIP-208ENST00000639561 NEURL1O76050 574 aa12.15□□□□□ -0.46
ATRIP-208ENST00000639561 GABRA1P14867 456 aa12.15□□□□□ -0.46
ATRIP-208ENST00000639561 CD96P40200 585 aa12.15□□□□□ -0.46
ATRIP-208ENST00000639561 GZMKP49863 264 aa12.15□□□□□ -0.46
ATRIP-208ENST00000639561 GALK2Q01415 458 aa12.15□□□□□ -0.46
ATRIP-208ENST00000639561 PCGF3Q3KNV8 242 aa12.15□□□□□ -0.46
ATRIP-208ENST00000639561 Q5BKY6 102 aa12.15□□□□□ -0.46
ATRIP-208ENST00000639561 LINC00696Q6ZRV3 163 aa12.15□□□□□ -0.46
ATRIP-208ENST00000639561 RNF144BQ7Z419 303 aa12.15□□□□□ -0.46
ATRIP-208ENST00000639561 OR13C9Q8NGT0 318 aa12.15□□□□□ -0.46
ATRIP-208ENST00000639561 GPR84Q9NQS5 396 aa12.15□□□□□ -0.46
ATRIP-208ENST00000639561 PRRC2CQ9Y520 2896 aaKnown RBP12.15□□□□□ -0.46
ATRIP-208ENST00000639561 PTPN13Q12923 2485 aa12.15□□□□□ -0.46
ATRIP-208ENST00000639561 MEIS3P1A6NDR6 274 aa12.15□□□□□ -0.46
ATRIP-208ENST00000639561 DNPH1O43598 174 aa12.15□□□□□ -0.46
ATRIP-208ENST00000639561 PEX14O75381 377 aa12.15□□□□□ -0.46
ATRIP-208ENST00000639561 C1QBP02746 253 aa12.15□□□□□ -0.46
ATRIP-208ENST00000639561 ABOP16442 354 aa12.15□□□□□ -0.46
ATRIP-208ENST00000639561 CXCL3P19876 107 aa12.15□□□□□ -0.46
ATRIP-208ENST00000639561 STOMP27105 288 aa12.15□□□□□ -0.46
ATRIP-208ENST00000639561 VEGFCP49767 419 aa12.15□□□□□ -0.46
ATRIP-208ENST00000639561 CARD18P57730 90 aa12.15□□□□□ -0.46
ATRIP-208ENST00000639561 ARG2P78540 354 aa12.15□□□□□ -0.46
ATRIP-208ENST00000639561 MAB21L1Q13394 359 aa12.15□□□□□ -0.46
ATRIP-208ENST00000639561 CDK10Q15131 360 aa12.15□□□□□ -0.46
ATRIP-208ENST00000639561 HYAL4Q2M3T9 481 aa12.15□□□□□ -0.46
ATRIP-208ENST00000639561 MOGAT2Q3SYC2 334 aa12.15□□□□□ -0.46
ATRIP-208ENST00000639561 C20orf196Q8IYI0 205 aa12.15□□□□□ -0.46
ATRIP-208ENST00000639561 LRRC18Q8N456 261 aa12.15□□□□□ -0.46
ATRIP-208ENST00000639561 OR1M1Q8NGA1 313 aa12.15□□□□□ -0.46
ATRIP-208ENST00000639561 OR4D10Q8NGI6 311 aa12.15□□□□□ -0.46
ATRIP-208ENST00000639561 PHF21AQ96BD5 680 aa12.15□□□□□ -0.46
ATRIP-208ENST00000639561 SIGLEC12Q96PQ1 595 aa12.15□□□□□ -0.46
ATRIP-208ENST00000639561 RBM24Q9BX46 236 aaKnown RBP12.15□□□□□ -0.46
ATRIP-208ENST00000639561 OR10A4Q9H209 315 aa12.15□□□□□ -0.46
ATRIP-208ENST00000639561 ZFP64Q9NPA5 681 aa12.15□□□□□ -0.46
ATRIP-208ENST00000639561 TMEM138Q9NPI0 162 aa12.15□□□□□ -0.46
ATRIP-208ENST00000639561 SLC5A6Q9Y289 635 aa12.15□□□□□ -0.46
ATRIP-208ENST00000639561 FLVCR1Q9Y5Y0 555 aa12.15□□□□□ -0.46
ATRIP-208ENST00000639561 ZNF716A6NP11 495 aa12.14□□□□□ -0.47
ATRIP-208ENST00000639561 RGS13O14921 159 aa12.14□□□□□ -0.47
ATRIP-208ENST00000639561 CXCL13O43927 109 aa12.14□□□□□ -0.47
ATRIP-208ENST00000639561 RBBP9O75884 186 aa12.14□□□□□ -0.47
ATRIP-208ENST00000639561 HPXP02790 462 aa12.14□□□□□ -0.47
ATRIP-208ENST00000639561 FCER2P06734 321 aa12.14□□□□□ -0.47
ATRIP-208ENST00000639561 GDF1P27539 372 aa12.14□□□□□ -0.47
ATRIP-208ENST00000639561 FAPQ12884 760 aa12.14□□□□□ -0.47
ATRIP-208ENST00000639561 FAM57BQ71RH2 274 aa12.14□□□□□ -0.47
ATRIP-208ENST00000639561 NAA40Q86UY6 237 aa12.14□□□□□ -0.47
ATRIP-208ENST00000639561 COMMD2Q86X83 199 aa12.14□□□□□ -0.47
ATRIP-208ENST00000639561 LIX1LQ8IVB5 337 aa12.14□□□□□ -0.47
ATRIP-208ENST00000639561 ZNF283Q8N7M2 679 aa12.14□□□□□ -0.47
ATRIP-208ENST00000639561 ROBO4Q8WZ75 1007 aa12.14□□□□□ -0.47
ATRIP-208ENST00000639561 SORCS2Q96PQ0 1159 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms