RNA–Protein interactions for RNA: ENST00000627002.1

PTP4A1-206, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 5 BASIC

Gene PTP4A1, Length 447 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-206ENST00000627002 POM121L2Q96KW2 1035 aa6.56□□□□□ -1.36
PTP4A1-206ENST00000627002 CMTM3Q96MX0 182 aa6.56□□□□□ -1.36
PTP4A1-206ENST00000627002 OPN3Q9H1Y3 402 aaPredicted RBP6.56□□□□□ -1.36
PTP4A1-206ENST00000627002 OPA3Q9H6K4 179 aa6.56□□□□□ -1.36
PTP4A1-206ENST00000627002 ABCB9Q9NP78 766 aa6.56□□□□□ -1.36
PTP4A1-206ENST00000627002 TAS2R4Q9NYW5 299 aa6.56□□□□□ -1.36
PTP4A1-206ENST00000627002 ZNF319Q9P2F9 582 aa6.56□□□□□ -1.36
PTP4A1-206ENST00000627002 ZNF629Q9UEG4 869 aaPredicted RBP6.56□□□□□ -1.36
PTP4A1-206ENST00000627002 AMDHD2Q9Y303 409 aa6.56□□□□□ -1.36
PTP4A1-206ENST00000627002 V9GYS6 101 aa6.56□□□□□ -1.36
PTP4A1-206ENST00000627002 MED12Q93074 2177 aa6.55□□□□□ -1.36
PTP4A1-206ENST00000627002 URB1O60287 2271 aaKnown RBP6.55□□□□□ -1.36
PTP4A1-206ENST00000627002 LOC100509620A0A075B734 347 aa6.55□□□□□ -1.36
PTP4A1-206ENST00000627002 C5orf49A4QMS7 147 aa6.55□□□□□ -1.36
PTP4A1-206ENST00000627002 ZNF503-AS2A6NEH8 195 aa6.55□□□□□ -1.36
PTP4A1-206ENST00000627002 FAM25AB3EWG3 89 aa6.55□□□□□ -1.36
PTP4A1-206ENST00000627002 FAM25CB3EWG5 89 aa6.55□□□□□ -1.36
PTP4A1-206ENST00000627002 FAM25GB3EWG6 89 aa6.55□□□□□ -1.36
PTP4A1-206ENST00000627002 E9PLN8 166 aa6.55□□□□□ -1.36
PTP4A1-206ENST00000627002 SLC17A2O00624 439 aa6.55□□□□□ -1.36
PTP4A1-206ENST00000627002 MAGEB3O15480 346 aa6.55□□□□□ -1.36
PTP4A1-206ENST00000627002 CALCBP10092 127 aa6.55□□□□□ -1.36
PTP4A1-206ENST00000627002 CBR1P16152 277 aa6.55□□□□□ -1.36
PTP4A1-206ENST00000627002 ADRA2CP18825 462 aa6.55□□□□□ -1.36
PTP4A1-206ENST00000627002 ATF1P18846 271 aa6.55□□□□□ -1.36
PTP4A1-206ENST00000627002 RAB3AP20336 220 aa6.55□□□□□ -1.36
PTP4A1-206ENST00000627002 IL32P24001 234 aa6.55□□□□□ -1.36
PTP4A1-206ENST00000627002 PTBP1P26599 531 aaKnown RBP eCLIP6.55□□□□□ -1.36
PTP4A1-206ENST00000627002 BDKRB2P30411 391 aa6.55□□□□□ -1.36
PTP4A1-206ENST00000627002 THBS2P35442 1172 aa6.55□□□□□ -1.36
PTP4A1-206ENST00000627002 THBS4P35443 961 aa6.55□□□□□ -1.36
PTP4A1-206ENST00000627002 TALDO1P37837 337 aa6.55□□□□□ -1.36
PTP4A1-206ENST00000627002 MAP2K3P46734 347 aa6.55□□□□□ -1.36
PTP4A1-206ENST00000627002 HGFACQ04756 655 aa6.55□□□□□ -1.36
PTP4A1-206ENST00000627002 PMPCAQ10713 525 aa6.55□□□□□ -1.36
PTP4A1-206ENST00000627002 MALLQ13021 153 aa6.55□□□□□ -1.36
PTP4A1-206ENST00000627002 RAB11BQ15907 218 aa6.55□□□□□ -1.36
PTP4A1-206ENST00000627002 TBC1D28Q2M2D7 210 aa6.55□□□□□ -1.36
PTP4A1-206ENST00000627002 SNAI3Q3KNW1 292 aa6.55□□□□□ -1.36
PTP4A1-206ENST00000627002 GLYATL3Q5SZD4 288 aa6.55□□□□□ -1.36
PTP4A1-206ENST00000627002 ZNF529Q6P280 563 aa6.55□□□□□ -1.36
PTP4A1-206ENST00000627002 C16orf87Q6PH81 154 aa6.55□□□□□ -1.36
PTP4A1-206ENST00000627002 METAP1DQ6UB28 335 aaPredicted RBP6.55□□□□□ -1.36
PTP4A1-206ENST00000627002 C3P1Q6ZMU1 363 aa6.55□□□□□ -1.36
PTP4A1-206ENST00000627002 UTS2BQ765I0 119 aa6.55□□□□□ -1.36
PTP4A1-206ENST00000627002 BHLHA15Q7RTS1 189 aaPredicted RBP6.55□□□□□ -1.36
PTP4A1-206ENST00000627002 MRGPRGQ86SM5 289 aa6.55□□□□□ -1.36
PTP4A1-206ENST00000627002 MDP1Q86V88 176 aa6.55□□□□□ -1.36
PTP4A1-206ENST00000627002 LRRC28Q86X40 367 aaPredicted RBP6.55□□□□□ -1.36
PTP4A1-206ENST00000627002 CXorf67Q86X51 503 aaPredicted RBP6.55□□□□□ -1.36
PTP4A1-206ENST00000627002 CDH26Q8IXH8 852 aa6.55□□□□□ -1.36
PTP4A1-206ENST00000627002 RPRMLQ8N4K4 120 aa6.55□□□□□ -1.36
PTP4A1-206ENST00000627002 FAM169BQ8N8A8 192 aa6.55□□□□□ -1.36
PTP4A1-206ENST00000627002 NAXEQ8NCW5 288 aa6.55□□□□□ -1.36
PTP4A1-206ENST00000627002 SEMA6DQ8NFY4 1073 aa6.55□□□□□ -1.36
PTP4A1-206ENST00000627002 OR1M1Q8NGA1 313 aa6.55□□□□□ -1.36
PTP4A1-206ENST00000627002 OR5L1Q8NGL2 311 aa6.55□□□□□ -1.36
PTP4A1-206ENST00000627002 ZNF671Q8TAW3 534 aa6.55□□□□□ -1.36
PTP4A1-206ENST00000627002 SPSB4Q96A44 273 aa6.55□□□□□ -1.36
PTP4A1-206ENST00000627002 APOBEC3DQ96AK3 386 aaPredicted RBP6.55□□□□□ -1.36
PTP4A1-206ENST00000627002 SGK3Q96BR1 496 aa6.55□□□□□ -1.36
PTP4A1-206ENST00000627002 ADAT3Q96EY9 351 aaPredicted RBP6.55□□□□□ -1.36
PTP4A1-206ENST00000627002 WBP1Q96G27 269 aa6.55□□□□□ -1.36
PTP4A1-206ENST00000627002 LYZL4Q96KX0 146 aa6.55□□□□□ -1.36
PTP4A1-206ENST00000627002 GFI1Q99684 422 aa6.55□□□□□ -1.36
PTP4A1-206ENST00000627002 USB1Q9BQ65 265 aaKnown RBP6.55□□□□□ -1.36
PTP4A1-206ENST00000627002 VKORC1Q9BQB6 163 aa6.55□□□□□ -1.36
PTP4A1-206ENST00000627002 MIXL1Q9H2W2 232 aa6.55□□□□□ -1.36
PTP4A1-206ENST00000627002 NOX3Q9HBY0 568 aa6.55□□□□□ -1.36
PTP4A1-206ENST00000627002 NEK6Q9HC98 313 aa6.55□□□□□ -1.36
PTP4A1-206ENST00000627002 TMEM138Q9NPI0 162 aa6.55□□□□□ -1.36
PTP4A1-206ENST00000627002 EIF3KQ9UBQ5 218 aaKnown RBP6.55□□□□□ -1.36
PTP4A1-206ENST00000627002 STEAP1Q9UHE8 339 aa6.55□□□□□ -1.36
PTP4A1-206ENST00000627002 TINAGQ9UJW2 476 aa6.55□□□□□ -1.36
PTP4A1-206ENST00000627002 SPATA2Q9UM82 520 aa6.55□□□□□ -1.36
PTP4A1-206ENST00000627002 ETV7Q9Y603 341 aa6.55□□□□□ -1.36
PTP4A1-206ENST00000627002 DMXL2Q8TDJ6 3036 aa6.54□□□□□ -1.36
PTP4A1-206ENST00000627002 A0A0G2JNJ9 132 aa6.54□□□□□ -1.36
PTP4A1-206ENST00000627002 C5orf63A6NC05 138 aa6.54□□□□□ -1.36
PTP4A1-206ENST00000627002 FABP12A6NFH5 140 aa6.54□□□□□ -1.36
PTP4A1-206ENST00000627002 OR5H1A6NKK0 313 aa6.54□□□□□ -1.36
PTP4A1-206ENST00000627002 B8ZZF3 427 aa6.54□□□□□ -1.36
PTP4A1-206ENST00000627002 J3QRK9 145 aa6.54□□□□□ -1.36
PTP4A1-206ENST00000627002 SULT1B1O43704 296 aa6.54□□□□□ -1.36
PTP4A1-206ENST00000627002 LMX1BO60663 402 aa6.54□□□□□ -1.36
PTP4A1-206ENST00000627002 HPGDSO60760 199 aa6.54□□□□□ -1.36
PTP4A1-206ENST00000627002 ALX3O95076 343 aa6.54□□□□□ -1.36
PTP4A1-206ENST00000627002 APOA1P02647 267 aa6.54□□□□□ -1.36
PTP4A1-206ENST00000627002 ALDOBP05062 364 aa6.54□□□□□ -1.36
PTP4A1-206ENST00000627002 CD37P11049 281 aa6.54□□□□□ -1.36
PTP4A1-206ENST00000627002 SLC2A2P11168 524 aaPredicted RBP6.54□□□□□ -1.36
PTP4A1-206ENST00000627002 SNRPBP14678 240 aaKnown RBP6.54□□□□□ -1.36
PTP4A1-206ENST00000627002 ZNF14P17017 642 aaPredicted RBP6.54□□□□□ -1.36
PTP4A1-206ENST00000627002 PSMB1P20618 241 aaKnown RBP6.54□□□□□ -1.36
PTP4A1-206ENST00000627002 CCNOP22674 350 aa6.54□□□□□ -1.36
PTP4A1-206ENST00000627002 EVX1P49640 407 aa6.54□□□□□ -1.36
PTP4A1-206ENST00000627002 SPOCK1Q08629 439 aa6.54□□□□□ -1.36
PTP4A1-206ENST00000627002 RIPPLY1Q0D2K3 151 aa6.54□□□□□ -1.36
PTP4A1-206ENST00000627002 UBE2NLQ5JXB2 153 aa6.54□□□□□ -1.36
PTP4A1-206ENST00000627002 HES5Q5TA89 166 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms