RNA–Protein interactions for RNA: ENST00000589838.5

PRKCSH-209, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRKCSH, Length 1,898 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-209ENST00000589838 SLC6A7Q99884 636 aa16.89■□□□□ 0.29
PRKCSH-209ENST00000589838 ULBP2Q9BZM5 246 aa16.89■□□□□ 0.29
PRKCSH-209ENST00000589838 CHST6Q9GZX3 395 aa16.89■□□□□ 0.29
PRKCSH-209ENST00000589838 ZNF319Q9P2F9 582 aa16.89■□□□□ 0.29
PRKCSH-209ENST00000589838 GHRLQ9UBU3 117 aa16.89■□□□□ 0.29
PRKCSH-209ENST00000589838 IGHV3-15A0A0B4J1V0 119 aa16.88■□□□□ 0.29
PRKCSH-209ENST00000589838 MCRIP1C9JLW8 97 aa16.88■□□□□ 0.29
PRKCSH-209ENST00000589838 TCN2P20062 427 aa16.88■□□□□ 0.29
PRKCSH-209ENST00000589838 THBS4P35443 961 aa16.88■□□□□ 0.29
PRKCSH-209ENST00000589838 ECH1Q13011 328 aa16.88■□□□□ 0.29
PRKCSH-209ENST00000589838 EXOSC2Q13868 293 aaKnown RBP16.88■□□□□ 0.29
PRKCSH-209ENST00000589838 SCGB2B2Q4G0G5 96 aa16.88■□□□□ 0.29
PRKCSH-209ENST00000589838 PHYHD1Q5SRE7 291 aa16.88■□□□□ 0.29
PRKCSH-209ENST00000589838 H3F3CQ6NXT2 135 aa16.88■□□□□ 0.29
PRKCSH-209ENST00000589838 DBX2Q6ZNG2 339 aa16.88■□□□□ 0.29
PRKCSH-209ENST00000589838 C20orf196Q8IYI0 205 aa16.88■□□□□ 0.29
PRKCSH-209ENST00000589838 BEST3Q8N1M1 668 aa16.88■□□□□ 0.29
PRKCSH-209ENST00000589838 ZDHHC22Q8N966 263 aa16.88■□□□□ 0.29
PRKCSH-209ENST00000589838 SELENOIQ9C0D9 397 aa16.88■□□□□ 0.29
PRKCSH-209ENST00000589838 FOXD3Q9UJU5 478 aaPredicted RBP16.88■□□□□ 0.29
PRKCSH-209ENST00000589838 WIPF3A6NGB9 483 aa16.88■□□□□ 0.29
PRKCSH-209ENST00000589838 IGLV3-1P01715 115 aa16.88■□□□□ 0.29
PRKCSH-209ENST00000589838 ZNF35P13682 527 aa16.88■□□□□ 0.29
PRKCSH-209ENST00000589838 ENPP1P22413 925 aa16.88■□□□□ 0.29
PRKCSH-209ENST00000589838 H2BFSP57053 126 aa16.88■□□□□ 0.29
PRKCSH-209ENST00000589838 SEC61A1P61619 476 aaKnown RBP16.88■□□□□ 0.29
PRKCSH-209ENST00000589838 CXADRP78310 365 aa16.88■□□□□ 0.29
PRKCSH-209ENST00000589838 GFOD2Q3B7J2 385 aa16.88■□□□□ 0.29
PRKCSH-209ENST00000589838 CLLU1Q5K131 121 aa16.88■□□□□ 0.29
PRKCSH-209ENST00000589838 ATPAF1Q5TC12 328 aaPredicted RBP16.88■□□□□ 0.29
PRKCSH-209ENST00000589838 ZNF468Q5VIY5 522 aaPredicted RBP16.88■□□□□ 0.29
PRKCSH-209ENST00000589838 TMED4Q7Z7H5 227 aa16.88■□□□□ 0.29
PRKCSH-209ENST00000589838 OR14L1PQ8NHC6 308 aa16.88■□□□□ 0.29
PRKCSH-209ENST00000589838 SPTSSAQ969W0 71 aa16.88■□□□□ 0.29
PRKCSH-209ENST00000589838 NABP1Q96AH0 204 aa16.88■□□□□ 0.29
PRKCSH-209ENST00000589838 C10orf35Q96D05 121 aa16.88■□□□□ 0.29
PRKCSH-209ENST00000589838 CMBLQ96DG6 245 aa16.88■□□□□ 0.29
PRKCSH-209ENST00000589838 TAAR9Q96RI9 348 aa16.88■□□□□ 0.29
PRKCSH-209ENST00000589838 URM1Q9BTM9 101 aaKnown RBP16.88■□□□□ 0.29
PRKCSH-209ENST00000589838 LPAR5Q9H1C0 372 aa16.88■□□□□ 0.29
PRKCSH-209ENST00000589838 OR14I1A6ND48 311 aa16.87■□□□□ 0.29
PRKCSH-209ENST00000589838 TUBAL3A6NHL2 446 aa16.87■□□□□ 0.29
PRKCSH-209ENST00000589838 PRF1P14222 555 aa16.87■□□□□ 0.29
PRKCSH-209ENST00000589838 MRPS34P82930 218 aaKnown RBP16.87■□□□□ 0.29
PRKCSH-209ENST00000589838 PNLIPRP3Q17RR3 467 aa16.87■□□□□ 0.29
PRKCSH-209ENST00000589838 HYAL4Q2M3T9 481 aa16.87■□□□□ 0.29
PRKCSH-209ENST00000589838 ZIC4Q8N9L1 334 aa16.87■□□□□ 0.29
PRKCSH-209ENST00000589838 OR56B1Q8NGI3 324 aa16.87■□□□□ 0.29
PRKCSH-209ENST00000589838 CT55Q8WUE5 264 aa16.87■□□□□ 0.29
PRKCSH-209ENST00000589838 MRPS18CQ9Y3D5 142 aaKnown RBP16.87■□□□□ 0.29
PRKCSH-209ENST00000589838 OR6C65A6NJZ3 312 aa16.86■□□□□ 0.29
PRKCSH-209ENST00000589838 CDC14BO60729 498 aa16.86■□□□□ 0.29
PRKCSH-209ENST00000589838 MTRF1O75570 445 aaKnown RBP16.86■□□□□ 0.29
PRKCSH-209ENST00000589838 SIX6O95475 246 aa16.86■□□□□ 0.29
PRKCSH-209ENST00000589838 MPIG6BO95866 241 aa16.86■□□□□ 0.29
PRKCSH-209ENST00000589838 IFNA6P05013 189 aa16.86■□□□□ 0.29
PRKCSH-209ENST00000589838 SERPINA7P05543 415 aa16.86■□□□□ 0.29
PRKCSH-209ENST00000589838 GNB3P16520 340 aa16.86■□□□□ 0.29
PRKCSH-209ENST00000589838 CXCL2P19875 107 aa16.86■□□□□ 0.29
PRKCSH-209ENST00000589838 SLC6A9P48067 706 aa16.86■□□□□ 0.29
PRKCSH-209ENST00000589838 CARD18P57730 90 aa16.86■□□□□ 0.29
PRKCSH-209ENST00000589838 B3GALT5-AS1P59052 145 aa16.86■□□□□ 0.29
PRKCSH-209ENST00000589838 ZNF528Q3MIS6 628 aa16.86■□□□□ 0.29
PRKCSH-209ENST00000589838 FAM27BQ5VT28 67 aa16.86■□□□□ 0.29
PRKCSH-209ENST00000589838 LPCAT3Q6P1A2 487 aa16.86■□□□□ 0.29
PRKCSH-209ENST00000589838 OR4S1Q8NGB4 309 aa16.86■□□□□ 0.29
PRKCSH-209ENST00000589838 OR13C8Q8NGS7 320 aa16.86■□□□□ 0.29
PRKCSH-209ENST00000589838 PP6455Q8WZ26 134 aa16.86■□□□□ 0.29
PRKCSH-209ENST00000589838 SOX7Q9BT81 388 aa16.86■□□□□ 0.29
PRKCSH-209ENST00000589838 TMEM59Q9BXS4 323 aa16.86■□□□□ 0.29
PRKCSH-209ENST00000589838 FLVCR1Q9Y5Y0 555 aa16.86■□□□□ 0.29
PRKCSH-209ENST00000589838 V9GYS6 101 aa16.86■□□□□ 0.29
PRKCSH-209ENST00000589838 USP34Q70CQ2 3546 aa16.86■□□□□ 0.29
PRKCSH-209ENST00000589838 LEUTXA8MZ59 168 aa16.86■□□□□ 0.29
PRKCSH-209ENST00000589838 F5H5K5 113 aa16.86■□□□□ 0.29
PRKCSH-209ENST00000589838 DHRS3O75911 302 aa16.86■□□□□ 0.29
PRKCSH-209ENST00000589838 CASRP41180 1078 aa16.86■□□□□ 0.29
PRKCSH-209ENST00000589838 C2orf68Q2NKX9 166 aa16.86■□□□□ 0.29
PRKCSH-209ENST00000589838 CD163Q86VB7 1156 aa16.86■□□□□ 0.29
PRKCSH-209ENST00000589838 LRRC18Q8N456 261 aa16.86■□□□□ 0.29
PRKCSH-209ENST00000589838 NUDCD2Q8WVJ2 157 aa16.86■□□□□ 0.29
PRKCSH-209ENST00000589838 RAB3CQ96E17 227 aa16.86■□□□□ 0.29
PRKCSH-209ENST00000589838 SRXN1Q9BYN0 137 aa16.86■□□□□ 0.29
PRKCSH-209ENST00000589838 CST11Q9H112 138 aa16.86■□□□□ 0.29
PRKCSH-209ENST00000589838 NCOA6Q14686 2063 aaPredicted RBP16.85■□□□□ 0.29
PRKCSH-209ENST00000589838 OR5H15A6NDH6 313 aa16.85■□□□□ 0.29
PRKCSH-209ENST00000589838 SMAD9O15198 467 aaKnown RBP16.85■□□□□ 0.29
PRKCSH-209ENST00000589838 CSN2P05814 226 aa16.85■□□□□ 0.29
PRKCSH-209ENST00000589838 S100A11P31949 105 aa16.85■□□□□ 0.29
PRKCSH-209ENST00000589838 OTX1P32242 354 aaPredicted RBP16.85■□□□□ 0.29
PRKCSH-209ENST00000589838 CBX5P45973 191 aa16.85■□□□□ 0.29
PRKCSH-209ENST00000589838 OR3A4PP47883 348 aa16.85■□□□□ 0.29
PRKCSH-209ENST00000589838 UBE2MP61081 183 aaKnown RBP16.85■□□□□ 0.29
PRKCSH-209ENST00000589838 RPS18P62269 152 aaKnown RBP16.85■□□□□ 0.29
PRKCSH-209ENST00000589838 LPAL2Q16609 132 aa16.85■□□□□ 0.29
PRKCSH-209ENST00000589838 NKPD1Q17RQ9 610 aa16.85■□□□□ 0.29
PRKCSH-209ENST00000589838 ACTBL2Q562R1 376 aa16.85■□□□□ 0.29
PRKCSH-209ENST00000589838 ACER2Q5QJU3 275 aa16.85■□□□□ 0.29
PRKCSH-209ENST00000589838 LIN54Q6MZP7 749 aa16.85■□□□□ 0.29
PRKCSH-209ENST00000589838 FAHD2BQ6P2I3 314 aaPredicted RBP16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms