RNA–Protein interactions for RNA: ENST00000587259.5

VMP1-204, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-204ENST00000587259 EMC3Q9P0I2 261 aa6.81□□□□□ -1.32
VMP1-204ENST00000587259 PRSS50Q9UI38 385 aa6.81□□□□□ -1.32
VMP1-204ENST00000587259 MCTS1Q9ULC4 181 aaKnown RBP6.81□□□□□ -1.32
VMP1-204ENST00000587259 COA3Q9Y2R0 106 aaPredicted RBP6.81□□□□□ -1.32
VMP1-204ENST00000587259 POLR1DQ9Y2S0 133 aa6.81□□□□□ -1.32
VMP1-204ENST00000587259 UGT2A1Q9Y4X1 527 aa6.81□□□□□ -1.32
VMP1-204ENST00000587259 PMF1-BGLAPU3KQ54 211 aa6.81□□□□□ -1.32
VMP1-204ENST00000587259 SVEP1Q4LDE5 3571 aa6.8□□□□□ -1.32
VMP1-204ENST00000587259 A0A1W2PR80 420 aa6.8□□□□□ -1.32
VMP1-204ENST00000587259 TVP23AA6NH52 213 aa6.8□□□□□ -1.32
VMP1-204ENST00000587259 SHISA9B4DS77 424 aa6.8□□□□□ -1.32
VMP1-204ENST00000587259 ZNF814B7Z6K7 855 aa6.8□□□□□ -1.32
VMP1-204ENST00000587259 ZNF878C9JN71 531 aa6.8□□□□□ -1.32
VMP1-204ENST00000587259 SLC43A1O75387 559 aa6.8□□□□□ -1.32
VMP1-204ENST00000587259 UPK3AO75631 287 aa6.8□□□□□ -1.32
VMP1-204ENST00000587259 IFNA2P01563 188 aa6.8□□□□□ -1.32
VMP1-204ENST00000587259 UCHL1P09936 223 aa6.8□□□□□ -1.32
VMP1-204ENST00000587259 OR8G3PP0DMU2 310 aa6.8□□□□□ -1.32
VMP1-204ENST00000587259 FCGR2AP12318 317 aa6.8□□□□□ -1.32
VMP1-204ENST00000587259 BMP4P12644 408 aa6.8□□□□□ -1.32
VMP1-204ENST00000587259 HLA-DOBP13765 273 aa6.8□□□□□ -1.32
VMP1-204ENST00000587259 PPP3CBP16298 524 aa6.8□□□□□ -1.32
VMP1-204ENST00000587259 ZNF16P17020 682 aaPredicted RBP6.8□□□□□ -1.32
VMP1-204ENST00000587259 RAB3BP20337 219 aa6.8□□□□□ -1.32
VMP1-204ENST00000587259 NPR2P20594 1047 aa6.8□□□□□ -1.32
VMP1-204ENST00000587259 PSMB1P20618 241 aaKnown RBP6.8□□□□□ -1.32
VMP1-204ENST00000587259 IL32P24001 234 aa6.8□□□□□ -1.32
VMP1-204ENST00000587259 TGFBR1P36897 503 aa6.8□□□□□ -1.32
VMP1-204ENST00000587259 TALDO1P37837 337 aa6.8□□□□□ -1.32
VMP1-204ENST00000587259 CAPZA1P52907 286 aa6.8□□□□□ -1.32
VMP1-204ENST00000587259 CLDN17P56750 224 aa6.8□□□□□ -1.32
VMP1-204ENST00000587259 GRB2P62993 217 aaKnown RBP6.8□□□□□ -1.32
VMP1-204ENST00000587259 MXD1Q05195 221 aa6.8□□□□□ -1.32
VMP1-204ENST00000587259 DOC2BQ14184 412 aa6.8□□□□□ -1.32
VMP1-204ENST00000587259 SLC17A1Q14916 467 aa6.8□□□□□ -1.32
VMP1-204ENST00000587259 MEP1BQ16820 701 aa6.8□□□□□ -1.32
VMP1-204ENST00000587259 NRN1LQ496H8 165 aa6.8□□□□□ -1.32
VMP1-204ENST00000587259 Q499Y3 187 aa6.8□□□□□ -1.32
VMP1-204ENST00000587259 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.8□□□□□ -1.321e-5■■■■□ 21.5
VMP1-204ENST00000587259 LYPD4Q6UWN0 246 aa6.8□□□□□ -1.32
VMP1-204ENST00000587259 LRRN1Q6UXK5 716 aa6.8□□□□□ -1.32
VMP1-204ENST00000587259 BAIAP2L2Q6UXY1 529 aa6.8□□□□□ -1.32
VMP1-204ENST00000587259 TMEM91Q6ZNR0 172 aa6.8□□□□□ -1.32
VMP1-204ENST00000587259 CREB3L2Q70SY1 520 aa6.8□□□□□ -1.32
VMP1-204ENST00000587259 HIST2H2ABQ8IUE6 130 aaPredicted RBP6.8□□□□□ -1.32
VMP1-204ENST00000587259 KDM8Q8N371 416 aa6.8□□□□□ -1.32
VMP1-204ENST00000587259 MFSD4AQ8N468 514 aa6.8□□□□□ -1.32
VMP1-204ENST00000587259 ZNF525Q8N782 197 aa6.8□□□□□ -1.32
VMP1-204ENST00000587259 ZNF676Q8N7Q3 588 aa6.8□□□□□ -1.32
VMP1-204ENST00000587259 OR2G2Q8NGZ5 317 aa6.8□□□□□ -1.32
VMP1-204ENST00000587259 RNF128Q8TEB7 428 aa6.8□□□□□ -1.32
VMP1-204ENST00000587259 ZNRF4Q8WWF5 429 aa6.8□□□□□ -1.32
VMP1-204ENST00000587259 TMEM45BQ96B21 275 aa6.8□□□□□ -1.32
VMP1-204ENST00000587259 CMTM3Q96MX0 182 aa6.8□□□□□ -1.32
VMP1-204ENST00000587259 TRAF4Q9BUZ4 470 aaPredicted RBP6.8□□□□□ -1.32
VMP1-204ENST00000587259 ABHD6Q9BV23 337 aa6.8□□□□□ -1.32
VMP1-204ENST00000587259 NELFAQ9H3P2 528 aa6.8□□□□□ -1.32
VMP1-204ENST00000587259 TPK1Q9H3S4 243 aa6.8□□□□□ -1.32
VMP1-204ENST00000587259 RNF167Q9H6Y7 350 aa6.8□□□□□ -1.32
VMP1-204ENST00000587259 GP6Q9HCN6 339 aa6.8□□□□□ -1.32
VMP1-204ENST00000587259 MRPL22Q9NWU5 206 aaKnown RBP6.8□□□□□ -1.32
VMP1-204ENST00000587259 GLTPQ9NZD2 209 aa6.8□□□□□ -1.32
VMP1-204ENST00000587259 NPAP1Q9NZP6 1156 aa6.8□□□□□ -1.32
VMP1-204ENST00000587259 ABRACLQ9P1F3 81 aa6.8□□□□□ -1.32
VMP1-204ENST00000587259 CKLFQ9UBR5 152 aa6.8□□□□□ -1.32
VMP1-204ENST00000587259 MRM2Q9UI43 246 aaKnown RBP6.8□□□□□ -1.32
VMP1-204ENST00000587259 A0A1W2PPL8 197 aa6.79□□□□□ -1.32
VMP1-204ENST00000587259 ACOD1A6NK06 481 aa6.79□□□□□ -1.32
VMP1-204ENST00000587259 NOTOA8MTQ0 251 aa6.79□□□□□ -1.32
VMP1-204ENST00000587259 E9PI62 339 aa6.79□□□□□ -1.32
VMP1-204ENST00000587259 CYTIPO60759 359 aa6.79□□□□□ -1.32
VMP1-204ENST00000587259 UPK1BO75841 260 aa6.79□□□□□ -1.32
VMP1-204ENST00000587259 IGHV3-9P01782 118 aa6.79□□□□□ -1.32
VMP1-204ENST00000587259 ISG15P05161 165 aa6.79□□□□□ -1.32
VMP1-204ENST00000587259 QDPRP09417 244 aa6.79□□□□□ -1.32
VMP1-204ENST00000587259 H2BFMP0C1H6 154 aa6.79□□□□□ -1.32
VMP1-204ENST00000587259 OCM2P0CE71 109 aa6.79□□□□□ -1.32
VMP1-204ENST00000587259 MSR1P21757 451 aa6.79□□□□□ -1.32
VMP1-204ENST00000587259 HSD11B1P28845 292 aa6.79□□□□□ -1.32
VMP1-204ENST00000587259 HCCSP53701 268 aa6.79□□□□□ -1.32
VMP1-204ENST00000587259 CAMK2DQ13557 499 aa6.79□□□□□ -1.32
VMP1-204ENST00000587259 RNPS1Q15287 305 aaKnown RBP6.79□□□□□ -1.32
VMP1-204ENST00000587259 TMEM249Q2WGJ8 235 aa6.79□□□□□ -1.32
VMP1-204ENST00000587259 SFRP5Q5T4F7 317 aa6.79□□□□□ -1.32
VMP1-204ENST00000587259 TMEM244Q5VVB8 128 aa6.79□□□□□ -1.32
VMP1-204ENST00000587259 SFXN4Q6P4A7 337 aa6.79□□□□□ -1.32
VMP1-204ENST00000587259 SLC25A47Q6Q0C1 308 aa6.79□□□□□ -1.32
VMP1-204ENST00000587259 UNQ9370/PRO34162Q6UXP9 181 aa6.79□□□□□ -1.32
VMP1-204ENST00000587259 NHLRC1Q6VVB1 395 aa6.79□□□□□ -1.32
VMP1-204ENST00000587259 FOXL2NBQ6ZUU3 175 aa6.79□□□□□ -1.32
VMP1-204ENST00000587259 BHLHA15Q7RTS1 189 aaPredicted RBP6.79□□□□□ -1.32
VMP1-204ENST00000587259 CCDC190Q86UF4 302 aa6.79□□□□□ -1.32
VMP1-204ENST00000587259 LRRC28Q86X40 367 aaPredicted RBP6.79□□□□□ -1.32
VMP1-204ENST00000587259 RFLNBQ8N5W9 214 aa6.79□□□□□ -1.32
VMP1-204ENST00000587259 GDPD1Q8N9F7 314 aa6.79□□□□□ -1.32
VMP1-204ENST00000587259 CCDC54Q8NEL0 328 aa6.79□□□□□ -1.32
VMP1-204ENST00000587259 STEAP2Q8NFT2 490 aa6.79□□□□□ -1.32
VMP1-204ENST00000587259 SETD6Q8TBK2 473 aa6.79□□□□□ -1.32
VMP1-204ENST00000587259 ST7LQ8TDW4 575 aa6.79□□□□□ -1.32
VMP1-204ENST00000587259 RNF133Q8WVZ7 376 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms