RNA–Protein interactions for RNA: ENST00000578904.1

CSNK1D-209, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 1,269 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-209ENST00000578904 TRAV1-2A0A0B4J238 106 aa12.07□□□□□ -0.48
CSNK1D-209ENST00000578904 LOC390937A0A1W2PQ73 354 aa12.07□□□□□ -0.48
CSNK1D-209ENST00000578904 TUBAL3A6NHL2 446 aa12.07□□□□□ -0.48
CSNK1D-209ENST00000578904 DHRS7CA6NNS2 312 aa12.07□□□□□ -0.48
CSNK1D-209ENST00000578904 P2RY10O00398 339 aa12.07□□□□□ -0.48
CSNK1D-209ENST00000578904 TMEM127O75204 238 aa12.07□□□□□ -0.48
CSNK1D-209ENST00000578904 UCHL1P09936 223 aa12.07□□□□□ -0.48
CSNK1D-209ENST00000578904 SLC2A1P11166 492 aa12.07□□□□□ -0.48
CSNK1D-209ENST00000578904 ZNF20P17024 532 aa12.07□□□□□ -0.48
CSNK1D-209ENST00000578904 CALRP27797 417 aaKnown RBP12.07□□□□□ -0.48
CSNK1D-209ENST00000578904 RORCP51449 518 aa12.07□□□□□ -0.48
CSNK1D-209ENST00000578904 RPS11P62280 158 aaKnown RBP eCLIP12.07□□□□□ -0.48
CSNK1D-209ENST00000578904 RSPO1Q2MKA7 263 aaPredicted RBP12.07□□□□□ -0.48
CSNK1D-209ENST00000578904 MEX3BQ6ZN04 569 aaKnown RBP12.07□□□□□ -0.48
CSNK1D-209ENST00000578904 TMEM91Q6ZNR0 172 aa12.07□□□□□ -0.48
CSNK1D-209ENST00000578904 PRSS45Q7RTY3 260 aa12.07□□□□□ -0.48
CSNK1D-209ENST00000578904 SERPINA12Q8IW75 414 aa12.07□□□□□ -0.48
CSNK1D-209ENST00000578904 OR5D14Q8NGL3 314 aa12.07□□□□□ -0.48
CSNK1D-209ENST00000578904 OR51E1Q8TCB6 317 aa12.07□□□□□ -0.48
CSNK1D-209ENST00000578904 SLC7A6Q92536 515 aa12.07□□□□□ -0.48
CSNK1D-209ENST00000578904 TMEM106AQ96A25 262 aa12.07□□□□□ -0.48
CSNK1D-209ENST00000578904 ZC3HAV1LQ96H79 300 aaKnown RBP12.07□□□□□ -0.48
CSNK1D-209ENST00000578904 DERL3Q96Q80 235 aa12.07□□□□□ -0.48
CSNK1D-209ENST00000578904 OR14A2Q96R54 314 aa12.07□□□□□ -0.48
CSNK1D-209ENST00000578904 GPR84Q9NQS5 396 aa12.07□□□□□ -0.48
CSNK1D-209ENST00000578904 SNTG1Q9NSN8 517 aa12.07□□□□□ -0.48
CSNK1D-209ENST00000578904 LOC100509620A0A075B734 347 aa12.06□□□□□ -0.48
CSNK1D-209ENST00000578904 A0A1W2PR80 420 aa12.06□□□□□ -0.48
CSNK1D-209ENST00000578904 MEGF11A6BM72 1044 aa12.06□□□□□ -0.48
CSNK1D-209ENST00000578904 TRIM64BA6NI03 449 aa12.06□□□□□ -0.48
CSNK1D-209ENST00000578904 DHRS3O75911 302 aa12.06□□□□□ -0.48
CSNK1D-209ENST00000578904 CDRT1O95170 752 aa12.06□□□□□ -0.48
CSNK1D-209ENST00000578904 IGFBP2P18065 325 aa12.06□□□□□ -0.48
CSNK1D-209ENST00000578904 SRMP19623 302 aa12.06□□□□□ -0.48
CSNK1D-209ENST00000578904 CCL1P22362 96 aa12.06□□□□□ -0.48
CSNK1D-209ENST00000578904 PCSK6P29122 969 aa12.06□□□□□ -0.48
CSNK1D-209ENST00000578904 GNALP38405 381 aa12.06□□□□□ -0.48
CSNK1D-209ENST00000578904 RAD52P43351 418 aa12.06□□□□□ -0.48
CSNK1D-209ENST00000578904 KIR2DL3P43628 341 aa12.06□□□□□ -0.48
CSNK1D-209ENST00000578904 MAP2K3P46734 347 aa12.06□□□□□ -0.48
CSNK1D-209ENST00000578904 SOX2P48431 317 aa12.06□□□□□ -0.48
CSNK1D-209ENST00000578904 PPP3R1P63098 170 aa12.06□□□□□ -0.48
CSNK1D-209ENST00000578904 TAB1Q15750 504 aa12.06□□□□□ -0.48
CSNK1D-209ENST00000578904 GFOD2Q3B7J2 385 aa12.06□□□□□ -0.48
CSNK1D-209ENST00000578904 ALKBH2Q6NS38 261 aa12.06□□□□□ -0.48
CSNK1D-209ENST00000578904 COLCA1Q6ZS62 124 aa12.06□□□□□ -0.48
CSNK1D-209ENST00000578904 PGAP1Q75T13 922 aa12.06□□□□□ -0.48
CSNK1D-209ENST00000578904 RDH10Q8IZV5 341 aa12.06□□□□□ -0.48
CSNK1D-209ENST00000578904 FTMTQ8N4E7 242 aa12.06□□□□□ -0.48
CSNK1D-209ENST00000578904 LINC01560Q8TB33 94 aa12.06□□□□□ -0.48
CSNK1D-209ENST00000578904 AP3S1Q92572 193 aa12.06□□□□□ -0.48
CSNK1D-209ENST00000578904 REEP6Q96HR9 211 aa12.06□□□□□ -0.48
CSNK1D-209ENST00000578904 ZNF75AQ96N20 296 aa12.06□□□□□ -0.48
CSNK1D-209ENST00000578904 BCL2L14Q9BZR8 327 aa12.06□□□□□ -0.48
CSNK1D-209ENST00000578904 NOX4Q9NPH5 578 aa12.06□□□□□ -0.48
CSNK1D-209ENST00000578904 ZNF275Q9NSD4 429 aaPredicted RBP12.06□□□□□ -0.48
CSNK1D-209ENST00000578904 FOXJ3Q9UPW0 622 aa12.06□□□□□ -0.48
CSNK1D-209ENST00000578904 A0A1W2PPW3 197 aa12.05□□□□□ -0.48
CSNK1D-209ENST00000578904 ZNF503-AS2A6NEH8 195 aa12.05□□□□□ -0.48
CSNK1D-209ENST00000578904 IGLV1-44P01699 117 aa12.05□□□□□ -0.48
CSNK1D-209ENST00000578904 CRYAAP02489 173 aa12.05□□□□□ -0.48
CSNK1D-209ENST00000578904 ERCC1P07992 297 aaPredicted RBP12.05□□□□□ -0.48
CSNK1D-209ENST00000578904 OCMP0CE72 109 aaPredicted RBP12.05□□□□□ -0.48
CSNK1D-209ENST00000578904 RIPPLY1Q0D2K3 151 aa12.05□□□□□ -0.48
CSNK1D-209ENST00000578904 SPCS2Q15005 226 aa12.05□□□□□ -0.48
CSNK1D-209ENST00000578904 MRPL21Q7Z2W9 205 aaKnown RBP12.05□□□□□ -0.48
CSNK1D-209ENST00000578904 WFDC8Q8IUA0 241 aa12.05□□□□□ -0.48
CSNK1D-209ENST00000578904 ZNF584Q8IVC4 421 aa12.05□□□□□ -0.48
CSNK1D-209ENST00000578904 DMRTC2Q8IXT2 367 aaPredicted RBP12.05□□□□□ -0.48
CSNK1D-209ENST00000578904 OR13C5Q8NGS8 318 aa12.05□□□□□ -0.48
CSNK1D-209ENST00000578904 NDNFQ8TB73 568 aa12.05□□□□□ -0.48
CSNK1D-209ENST00000578904 PPP1R14AQ96A00 147 aa12.05□□□□□ -0.48
CSNK1D-209ENST00000578904 FAM71F1Q96KD3 344 aaPredicted RBP12.05□□□□□ -0.48
CSNK1D-209ENST00000578904 WFIKKN1Q96NZ8 548 aa12.05□□□□□ -0.48
CSNK1D-209ENST00000578904 PSMG3-AS1Q96PY0 264 aa12.05□□□□□ -0.48
CSNK1D-209ENST00000578904 DCUN1D5Q9BTE7 237 aa12.05□□□□□ -0.48
CSNK1D-209ENST00000578904 NOX3Q9HBY0 568 aa12.05□□□□□ -0.48
CSNK1D-209ENST00000578904 CRIM1Q9NZV1 1036 aa12.05□□□□□ -0.48
CSNK1D-209ENST00000578904 CCDC59Q9P031 241 aaKnown RBP12.05□□□□□ -0.48
CSNK1D-209ENST00000578904 SPTAN1Q13813 2472 aaKnown RBP12.05□□□□□ -0.48
CSNK1D-209ENST00000578904 TRBV5-7A0A0A0MS05 114 aa12.04□□□□□ -0.48
CSNK1D-209ENST00000578904 MAGEB3O15480 346 aa12.04□□□□□ -0.48
CSNK1D-209ENST00000578904 ICMTO60725 284 aa12.04□□□□□ -0.48
CSNK1D-209ENST00000578904 IGLV3-1P01715 115 aa12.04□□□□□ -0.48
CSNK1D-209ENST00000578904 COX6B1P14854 86 aa12.04□□□□□ -0.48
CSNK1D-209ENST00000578904 SELEP16581 610 aa12.04□□□□□ -0.48
CSNK1D-209ENST00000578904 RAB3BP20337 219 aa12.04□□□□□ -0.48
CSNK1D-209ENST00000578904 SDC2P34741 201 aa12.04□□□□□ -0.48
CSNK1D-209ENST00000578904 DDOSTP39656 456 aa12.04□□□□□ -0.48
CSNK1D-209ENST00000578904 SNAI3Q3KNW1 292 aa12.04□□□□□ -0.48
CSNK1D-209ENST00000578904 ZBTB37Q5TC79 503 aa12.04□□□□□ -0.48
CSNK1D-209ENST00000578904 TMEM108Q6UXF1 575 aa12.04□□□□□ -0.48
CSNK1D-209ENST00000578904 NAA40Q86UY6 237 aa12.04□□□□□ -0.48
CSNK1D-209ENST00000578904 PARP16Q8N5Y8 322 aa12.04□□□□□ -0.48
CSNK1D-209ENST00000578904 PLPP7Q8NBV4 271 aa12.04□□□□□ -0.48
CSNK1D-209ENST00000578904 CSNK2A3Q8NEV1 391 aa12.04□□□□□ -0.48
CSNK1D-209ENST00000578904 SEMA6DQ8NFY4 1073 aa12.04□□□□□ -0.48
CSNK1D-209ENST00000578904 DYNC2LI1Q8TCX1 351 aa12.04□□□□□ -0.48
CSNK1D-209ENST00000578904 PP6455Q8WZ26 134 aa12.04□□□□□ -0.48
CSNK1D-209ENST00000578904 RGP1Q92546 391 aaPredicted RBP12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms