RNA–Protein interactions for RNA: ENST00000576708.5

NUP88-212, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-212ENST00000576708 LIPAP38571 399 aa5.21□□□□□ -1.58
NUP88-212ENST00000576708 CDKN2AP42771 156 aaKnown RBP5.21□□□□□ -1.58
NUP88-212ENST00000576708 GUCA1AP43080 201 aaPredicted RBP5.21□□□□□ -1.58
NUP88-212ENST00000576708 CENPAP49450 140 aa5.21□□□□□ -1.58
NUP88-212ENST00000576708 GSK3BP49841 420 aa5.21□□□□□ -1.58
NUP88-212ENST00000576708 FXYD6P3P58550 94 aa5.21□□□□□ -1.58
NUP88-212ENST00000576708 CTAG1AP78358 180 aa5.21□□□□□ -1.58
NUP88-212ENST00000576708 HOXA4Q00056 320 aaPredicted RBP5.21□□□□□ -1.58
NUP88-212ENST00000576708 SLC3A1Q07837 685 aa5.21□□□□□ -1.58
NUP88-212ENST00000576708 SCRN3Q0VDG4 424 aa5.21□□□□□ -1.58
NUP88-212ENST00000576708 ZNF154Q13106 437 aa5.21□□□□□ -1.58
NUP88-212ENST00000576708 SCGB2A2Q13296 93 aa5.21□□□□□ -1.58
NUP88-212ENST00000576708 KRR1Q13601 381 aaKnown RBP5.21□□□□□ -1.58
NUP88-212ENST00000576708 SEC23BQ15437 767 aa5.21□□□□□ -1.58
NUP88-212ENST00000576708 MEP1BQ16820 701 aa5.21□□□□□ -1.58
NUP88-212ENST00000576708 AWAT1Q58HT5 328 aa5.21□□□□□ -1.58
NUP88-212ENST00000576708 FAM201AQ5SY85 155 aa5.21□□□□□ -1.58
NUP88-212ENST00000576708 FAM205BPQ63HN1 556 aa5.21□□□□□ -1.58
NUP88-212ENST00000576708 OR2T2Q6IF00 324 aa5.21□□□□□ -1.58
NUP88-212ENST00000576708 CORO6Q6QEF8 472 aa5.21□□□□□ -1.58
NUP88-212ENST00000576708 ARL9Q6T311 187 aa5.21□□□□□ -1.58
NUP88-212ENST00000576708 UNQ6126/PRO20091Q6UXV3 157 aa5.21□□□□□ -1.58
NUP88-212ENST00000576708 PTCHD4Q6ZW05 846 aa5.21□□□□□ -1.58
NUP88-212ENST00000576708 TMPRSS11FQ6ZWK6 438 aa5.21□□□□□ -1.58
NUP88-212ENST00000576708 LRRC28Q86X40 367 aaPredicted RBP5.21□□□□□ -1.58
NUP88-212ENST00000576708 ZNF283Q8N7M2 679 aa5.21□□□□□ -1.58
NUP88-212ENST00000576708 FAM86B1Q8N7N1 296 aa5.21□□□□□ -1.58
NUP88-212ENST00000576708 ATG16L2Q8NAA4 619 aa5.21□□□□□ -1.58
NUP88-212ENST00000576708 OR10AD1Q8NGE0 317 aa5.21□□□□□ -1.58
NUP88-212ENST00000576708 OR52J3Q8NH60 311 aa5.21□□□□□ -1.58
NUP88-212ENST00000576708 OR1F12Q8NHA8 337 aa5.21□□□□□ -1.58
NUP88-212ENST00000576708 FNDC8Q8TC99 324 aa5.21□□□□□ -1.58
NUP88-212ENST00000576708 SLC7A13Q8TCU3 470 aa5.21□□□□□ -1.58
NUP88-212ENST00000576708 FAM162AQ96A26 154 aa5.21□□□□□ -1.58
NUP88-212ENST00000576708 HAVCR1Q96D42 359 aa5.21□□□□□ -1.58
NUP88-212ENST00000576708 SAMD8Q96LT4 415 aa5.21□□□□□ -1.58
NUP88-212ENST00000576708 C1orf147Q96MC9 270 aaPredicted RBP5.21□□□□□ -1.58
NUP88-212ENST00000576708 ZNF48Q96MX3 618 aaPredicted RBP5.21□□□□□ -1.58
NUP88-212ENST00000576708 OR2V2Q96R30 315 aa5.21□□□□□ -1.58
NUP88-212ENST00000576708 GPA33Q99795 319 aa5.21□□□□□ -1.58
NUP88-212ENST00000576708 CHCHD6Q9BRQ6 235 aa5.21□□□□□ -1.58
NUP88-212ENST00000576708 NUAK2Q9H093 628 aa5.21□□□□□ -1.58
NUP88-212ENST00000576708 SYT4Q9H2B2 425 aa5.21□□□□□ -1.58
NUP88-212ENST00000576708 NMNAT1Q9HAN9 279 aaPredicted RBP5.21□□□□□ -1.58
NUP88-212ENST00000576708 PATZ1Q9HBE1 687 aaKnown RBP5.21□□□□□ -1.58
NUP88-212ENST00000576708 TBCCD1Q9NVR7 557 aa5.21□□□□□ -1.58
NUP88-212ENST00000576708 ZNF446Q9NWS9 450 aa5.21□□□□□ -1.58
NUP88-212ENST00000576708 PLEK2Q9NYT0 353 aa5.21□□□□□ -1.58
NUP88-212ENST00000576708 FAM30AQ9NZY2 134 aa5.21□□□□□ -1.58
NUP88-212ENST00000576708 NDRG4Q9ULP0 352 aaKnown RBP5.21□□□□□ -1.58
NUP88-212ENST00000576708 PPP1R3CQ9UQK1 317 aa5.21□□□□□ -1.58
NUP88-212ENST00000576708 PCDHGB1Q9Y5G3 927 aa5.21□□□□□ -1.58
NUP88-212ENST00000576708 IER3IP1Q9Y5U9 82 aa5.21□□□□□ -1.58
NUP88-212ENST00000576708 ENPP4Q9Y6X5 453 aa5.21□□□□□ -1.58
NUP88-212ENST00000576708 V9GYQ6 96 aa5.21□□□□□ -1.58
NUP88-212ENST00000576708 DYSFO75923 2080 aa5.2□□□□□ -1.58
NUP88-212ENST00000576708 TANC2Q9HCD6 1990 aa5.2□□□□□ -1.58
NUP88-212ENST00000576708 TRBV4-1A0A0J9YWV2 114 aa5.2□□□□□ -1.58
NUP88-212ENST00000576708 MDFIC2A0A1B0GVS7 189 aa5.2□□□□□ -1.58
NUP88-212ENST00000576708 HTR3EA5X5Y0 456 aa5.2□□□□□ -1.58
NUP88-212ENST00000576708 OR6C6A6NF89 314 aa5.2□□□□□ -1.58
NUP88-212ENST00000576708 DNAJC9-AS1A6NH13 148 aa5.2□□□□□ -1.58
NUP88-212ENST00000576708 PRSS29PA6NIE9 313 aa5.2□□□□□ -1.58
NUP88-212ENST00000576708 CEACAM18A8MTB9 384 aa5.2□□□□□ -1.58
NUP88-212ENST00000576708 F5H0A9 414 aaPredicted RBP5.2□□□□□ -1.58
NUP88-212ENST00000576708 F5H5P2 479 aa5.2□□□□□ -1.58
NUP88-212ENST00000576708 TMEM178BH3BS89 294 aa5.2□□□□□ -1.58
NUP88-212ENST00000576708 H3BSA7 217 aa5.2□□□□□ -1.58
NUP88-212ENST00000576708 XKRYO14609 159 aa5.2□□□□□ -1.58
NUP88-212ENST00000576708 MLNRO43193 412 aa5.2□□□□□ -1.58
NUP88-212ENST00000576708 KCNAB3O43448 404 aa5.2□□□□□ -1.58
NUP88-212ENST00000576708 NDUFB2O95178 105 aa5.2□□□□□ -1.58
NUP88-212ENST00000576708 PPP1R3DO95685 299 aa5.2□□□□□ -1.58
NUP88-212ENST00000576708 HLA-DPB1P04440 258 aa5.2□□□□□ -1.58
NUP88-212ENST00000576708 H1F0P07305 194 aaKnown RBP5.2□□□□□ -1.58
NUP88-212ENST00000576708 IGHV4-38-2P0DP08 117 aa5.2□□□□□ -1.58
NUP88-212ENST00000576708 COX5BP10606 129 aa5.2□□□□□ -1.58
NUP88-212ENST00000576708 GCSHP23434 173 aa5.2□□□□□ -1.58
NUP88-212ENST00000576708 TNFSF4P23510 183 aa5.2□□□□□ -1.58
NUP88-212ENST00000576708 GATA3P23771 443 aa5.2□□□□□ -1.58
NUP88-212ENST00000576708 CD80P33681 288 aa5.2□□□□□ -1.58
NUP88-212ENST00000576708 PMELP40967 661 aa5.2□□□□□ -1.58
NUP88-212ENST00000576708 OMPP47874 163 aa5.2□□□□□ -1.58
NUP88-212ENST00000576708 BTG1P62324 171 aa5.2□□□□□ -1.58
NUP88-212ENST00000576708 FOXE3Q13461 319 aa5.2□□□□□ -1.58
NUP88-212ENST00000576708 AQP6Q13520 282 aa5.2□□□□□ -1.58
NUP88-212ENST00000576708 RSPO1Q2MKA7 263 aaPredicted RBP5.2□□□□□ -1.58
NUP88-212ENST00000576708 ANKDD1AQ495B1 522 aa5.2□□□□□ -1.58
NUP88-212ENST00000576708 ARMCX4Q5H9R4 360 aa5.2□□□□□ -1.58
NUP88-212ENST00000576708 FGD3Q5JSP0 725 aa5.2□□□□□ -1.58
NUP88-212ENST00000576708 C8orf82Q6P1X6 216 aaPredicted RBP5.2□□□□□ -1.58
NUP88-212ENST00000576708 RRM2BQ7LG56 351 aa5.2□□□□□ -1.58
NUP88-212ENST00000576708 NAA40Q86UY6 237 aa5.2□□□□□ -1.58
NUP88-212ENST00000576708 MOGAT3Q86VF5 341 aa5.2□□□□□ -1.58
NUP88-212ENST00000576708 FAM90A1Q86YD7 464 aa5.2□□□□□ -1.58
NUP88-212ENST00000576708 LINC00346Q8IVM7 164 aa5.2□□□□□ -1.58
NUP88-212ENST00000576708 RNF113BQ8IZP6 322 aaKnown RBP5.2□□□□□ -1.58
NUP88-212ENST00000576708 TEX29Q8N6K0 151 aa5.2□□□□□ -1.58
NUP88-212ENST00000576708 RNF148Q8N7C7 305 aa5.2□□□□□ -1.58
NUP88-212ENST00000576708 FAM156AQ8NDB6 213 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms