RNA–Protein interactions for RNA: ENST00000564641.1

CHD9-212, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 4

Gene CHD9, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-212ENST00000564641 ZNF222Q9UK12 451 aa3.01□□□□□ -1.93
CHD9-212ENST00000564641 SLC22A7Q9Y694 548 aa3.01□□□□□ -1.93
CHD9-212ENST00000564641 KMT2BQ9UMN6 2715 aaPredicted RBP3.01□□□□□ -1.93
CHD9-212ENST00000564641 PKD1L2Q7Z442 2459 aa3.01□□□□□ -1.93
CHD9-212ENST00000564641 CFAP47Q6ZTR5 3102 aa3□□□□□ -1.93
CHD9-212ENST00000564641 CABIN1Q9Y6J0 2220 aa3□□□□□ -1.93
CHD9-212ENST00000564641 BAHCC1Q9P281 2608 aa3□□□□□ -1.93
CHD9-212ENST00000564641 USP24Q9UPU5 2620 aa3□□□□□ -1.93
CHD9-212ENST00000564641 PLXND1Q9Y4D7 1925 aa3□□□□□ -1.93
CHD9-212ENST00000564641 RNF222A6NCQ9 220 aa3□□□□□ -1.93
CHD9-212ENST00000564641 LGALS8O00214 317 aa3□□□□□ -1.93
CHD9-212ENST00000564641 CDC7O00311 574 aa3□□□□□ -1.93
CHD9-212ENST00000564641 PDCD5O14737 125 aa3□□□□□ -1.93
CHD9-212ENST00000564641 FABP7O15540 132 aa3□□□□□ -1.93
CHD9-212ENST00000564641 RRP8O43159 456 aaKnown RBP3□□□□□ -1.93
CHD9-212ENST00000564641 KIAA0513O60268 411 aa3□□□□□ -1.93
CHD9-212ENST00000564641 TSPAN2O60636 221 aa3□□□□□ -1.93
CHD9-212ENST00000564641 HCN1O60741 890 aa3□□□□□ -1.93
CHD9-212ENST00000564641 HPGDSO60760 199 aa3□□□□□ -1.93
CHD9-212ENST00000564641 VENTXO95231 258 aa3□□□□□ -1.93
CHD9-212ENST00000564641 PRAMEF12O95522 483 aa3□□□□□ -1.93
CHD9-212ENST00000564641 SEMA4FO95754 770 aa3□□□□□ -1.93
CHD9-212ENST00000564641 LALBAP00709 142 aa3□□□□□ -1.93
CHD9-212ENST00000564641 CST1P01037 141 aa3□□□□□ -1.93
CHD9-212ENST00000564641 CALCAP01258 141 aa3□□□□□ -1.93
CHD9-212ENST00000564641 FCER2P06734 321 aa3□□□□□ -1.93
CHD9-212ENST00000564641 HBQ1P09105 142 aa3□□□□□ -1.93
CHD9-212ENST00000564641 OR4Q2P0C623 313 aa3□□□□□ -1.93
CHD9-212ENST00000564641 TSPAN19P0C672 248 aa3□□□□□ -1.93
CHD9-212ENST00000564641 SMIM6P0DI80 62 aa3□□□□□ -1.93
CHD9-212ENST00000564641 CALCBP10092 127 aa3□□□□□ -1.93
CHD9-212ENST00000564641 MLNP12872 115 aa3□□□□□ -1.93
CHD9-212ENST00000564641 NCK1P16333 377 aa3□□□□□ -1.93
CHD9-212ENST00000564641 PGAM1P18669 254 aa3□□□□□ -1.93
CHD9-212ENST00000564641 RAB3BP20337 219 aa3□□□□□ -1.93
CHD9-212ENST00000564641 ATP5C1P36542 298 aaKnown RBP3□□□□□ -1.93
CHD9-212ENST00000564641 GPX4P36969 197 aaPredicted RBP3□□□□□ -1.93
CHD9-212ENST00000564641 SPAM1P38567 509 aa3□□□□□ -1.93
CHD9-212ENST00000564641 CD79BP40259 229 aa3□□□□□ -1.93
CHD9-212ENST00000564641 MAGEA6P43360 314 aa3□□□□□ -1.93
CHD9-212ENST00000564641 POU3F4P49335 361 aa3□□□□□ -1.93
CHD9-212ENST00000564641 HNMTP50135 292 aa3□□□□□ -1.93
CHD9-212ENST00000564641 RORCP51449 518 aa3□□□□□ -1.93
CHD9-212ENST00000564641 RAB4BP61018 213 aa3□□□□□ -1.93
CHD9-212ENST00000564641 BTG1P62324 171 aa3□□□□□ -1.93
CHD9-212ENST00000564641 PSPHP78330 225 aa3□□□□□ -1.93
CHD9-212ENST00000564641 SLC35A2P78381 396 aa3□□□□□ -1.93
CHD9-212ENST00000564641 SLC7A9P82251 487 aa3□□□□□ -1.93
CHD9-212ENST00000564641 DEFA5Q01523 94 aa3□□□□□ -1.93
CHD9-212ENST00000564641 DEFA6Q01524 100 aa3□□□□□ -1.93
CHD9-212ENST00000564641 GRB7Q14451 532 aa3□□□□□ -1.93
CHD9-212ENST00000564641 SMCO1Q147U7 214 aa3□□□□□ -1.93
CHD9-212ENST00000564641 TRAM2Q15035 370 aa3□□□□□ -1.93
CHD9-212ENST00000564641 NCF4Q15080 339 aa3□□□□□ -1.93
CHD9-212ENST00000564641 SF3A2Q15428 464 aaKnown RBP3□□□□□ -1.93
CHD9-212ENST00000564641 ZNF77Q15935 545 aa3□□□□□ -1.93
CHD9-212ENST00000564641 HAGHQ16775 308 aa3□□□□□ -1.93
CHD9-212ENST00000564641 TATDN3Q17R31 274 aa3□□□□□ -1.93
CHD9-212ENST00000564641 ECSCRQ19T08 205 aa3□□□□□ -1.93
CHD9-212ENST00000564641 ANKRD55Q3KP44 614 aa3□□□□□ -1.93
CHD9-212ENST00000564641 RFTN2Q52LD8 501 aaPredicted RBP3□□□□□ -1.93
CHD9-212ENST00000564641 SPANXN3Q5MJ09 141 aa3□□□□□ -1.93
CHD9-212ENST00000564641 C1orf220Q5T0J3 134 aa3□□□□□ -1.93
CHD9-212ENST00000564641 KHDRBS2Q5VWX1 349 aaKnown RBP3□□□□□ -1.93
CHD9-212ENST00000564641 LIPJQ5W064 366 aa3□□□□□ -1.93
CHD9-212ENST00000564641 TRIQKQ629K1 86 aa3□□□□□ -1.93
CHD9-212ENST00000564641 WSCD1Q658N2 575 aa3□□□□□ -1.93
CHD9-212ENST00000564641 STEAP4Q687X5 459 aa3□□□□□ -1.93
CHD9-212ENST00000564641 ELP2Q6IA86 826 aa3□□□□□ -1.93
CHD9-212ENST00000564641 LAIR2Q6ISS4 152 aa3□□□□□ -1.93
CHD9-212ENST00000564641 SLC25A25Q6KCM7 469 aa3□□□□□ -1.93
CHD9-212ENST00000564641 C3orf33Q6P1S2 294 aa3□□□□□ -1.93
CHD9-212ENST00000564641 KDELC1Q6UW63 502 aa3□□□□□ -1.93
CHD9-212ENST00000564641 Q6ZS52 159 aa3□□□□□ -1.93
CHD9-212ENST00000564641 GOLGA7Q7Z5G4 137 aa3□□□□□ -1.93
CHD9-212ENST00000564641 TRIM69Q86WT6 500 aa3□□□□□ -1.93
CHD9-212ENST00000564641 CDKL3Q8IVW4 592 aaPredicted RBP3□□□□□ -1.93
CHD9-212ENST00000564641 DAW1Q8N136 415 aa3□□□□□ -1.93
CHD9-212ENST00000564641 LIX1Q8N485 282 aa3□□□□□ -1.93
CHD9-212ENST00000564641 ATPAF2Q8N5M1 289 aa3□□□□□ -1.93
CHD9-212ENST00000564641 MS4A15Q8N5U1 240 aa3□□□□□ -1.93
CHD9-212ENST00000564641 EIF4E3Q8N5X7 224 aaKnown RBP3□□□□□ -1.93
CHD9-212ENST00000564641 C12orf29Q8N999 325 aa3□□□□□ -1.93
CHD9-212ENST00000564641 FBXL13Q8NEE6 735 aa3□□□□□ -1.93
CHD9-212ENST00000564641 DUSP18Q8NEJ0 188 aa3□□□□□ -1.93
CHD9-212ENST00000564641 OR6C4Q8NGE1 309 aa3□□□□□ -1.93
CHD9-212ENST00000564641 OR8D4Q8NGM9 314 aa3□□□□□ -1.93
CHD9-212ENST00000564641 RNASE11Q8TAA1 199 aaKnown RBP3□□□□□ -1.93
CHD9-212ENST00000564641 CNIH3Q8TBE1 160 aa3□□□□□ -1.93
CHD9-212ENST00000564641 PCNPQ8WW12 178 aaKnown RBP3□□□□□ -1.93
CHD9-212ENST00000564641 SELENOMQ8WWX9 145 aa3□□□□□ -1.93
CHD9-212ENST00000564641 TMEM37Q8WXS4 190 aa3□□□□□ -1.93
CHD9-212ENST00000564641 PHYHIPQ92561 330 aa3□□□□□ -1.93
CHD9-212ENST00000564641 THRSPQ92748 146 aa3□□□□□ -1.93
CHD9-212ENST00000564641 FBXO32Q969P5 355 aa3□□□□□ -1.93
CHD9-212ENST00000564641 LRRC58Q96CX6 371 aa3□□□□□ -1.93
CHD9-212ENST00000564641 CCDC126Q96EE4 140 aa3□□□□□ -1.93
CHD9-212ENST00000564641 NARS2Q96I59 477 aaKnown RBP3□□□□□ -1.93
CHD9-212ENST00000564641 HPDLQ96IR7 371 aa3□□□□□ -1.93
CHD9-212ENST00000564641 Q96MT0 163 aa3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms