RNA–Protein interactions for RNA: ENST00000564540.5

UBR1-205, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-205ENST00000564540 FAM131CQ96AQ9 280 aa2.17□□□□□ -2.06
UBR1-205ENST00000564540 CPB2Q96IY4 423 aa2.17□□□□□ -2.06
UBR1-205ENST00000564540 GLT1D1Q96MS3 346 aa2.17□□□□□ -2.06
UBR1-205ENST00000564540 RNF5Q99942 180 aa2.17□□□□□ -2.06
UBR1-205ENST00000564540 RARRES2Q99969 163 aa2.17□□□□□ -2.06
UBR1-205ENST00000564540 MAP1LC3CQ9BXW4 147 aa2.17□□□□□ -2.06
UBR1-205ENST00000564540 NAA50Q9GZZ1 169 aaKnown RBP2.17□□□□□ -2.06
UBR1-205ENST00000564540 DEFB129Q9H1M3 183 aa2.17□□□□□ -2.06
UBR1-205ENST00000564540 ZC4H2Q9NQZ6 224 aa2.17□□□□□ -2.06
UBR1-205ENST00000564540 STMN3Q9NZ72 180 aa2.17□□□□□ -2.06
UBR1-205ENST00000564540 CD300AQ9UGN4 299 aa2.17□□□□□ -2.06
UBR1-205ENST00000564540 ING4Q9UNL4 249 aa2.17□□□□□ -2.06
UBR1-205ENST00000564540 SAR1BQ9Y6B6 198 aa2.17□□□□□ -2.06
UBR1-205ENST00000564540 S4R3C0 116 aa2.17□□□□□ -2.06
UBR1-205ENST00000564540 V9GYY5 206 aaPredicted RBP2.17□□□□□ -2.06
UBR1-205ENST00000564540 DHX57Q6P158 1386 aaKnown RBP2.17□□□□□ -2.06
UBR1-205ENST00000564540 SDK2Q58EX2 2172 aa2.17□□□□□ -2.06
UBR1-205ENST00000564540 ADGRA3Q8IWK6 1321 aa2.17□□□□□ -2.06
UBR1-205ENST00000564540 RAB19A4D1S5 217 aa2.16□□□□□ -2.06
UBR1-205ENST00000564540 K7EMT4 169 aa2.16□□□□□ -2.06
UBR1-205ENST00000564540 PLPP1O14494 284 aa2.16□□□□□ -2.06
UBR1-205ENST00000564540 DYNC1I1O14576 645 aa2.16□□□□□ -2.06
UBR1-205ENST00000564540 RFXANKO14593 260 aa2.16□□□□□ -2.06
UBR1-205ENST00000564540 NDUFS6O75380 124 aaKnown RBP2.16□□□□□ -2.06
UBR1-205ENST00000564540 CDRT1O95170 752 aa2.16□□□□□ -2.06
UBR1-205ENST00000564540 NQO2P16083 231 aa2.16□□□□□ -2.06
UBR1-205ENST00000564540 SPAM1P38567 509 aa2.16□□□□□ -2.06
UBR1-205ENST00000564540 CSKP41240 450 aa2.16□□□□□ -2.06
UBR1-205ENST00000564540 CDKN2BP42772 138 aa2.16□□□□□ -2.06
UBR1-205ENST00000564540 MAP3K7CLP57077 242 aa2.16□□□□□ -2.06
UBR1-205ENST00000564540 ADARB1P78563 741 aaKnown RBP2.16□□□□□ -2.06
UBR1-205ENST00000564540 PITPNAQ00169 270 aa2.16□□□□□ -2.06
UBR1-205ENST00000564540 SP4Q02446 784 aa2.16□□□□□ -2.06
UBR1-205ENST00000564540 SLC25A11Q02978 314 aaKnown RBP2.16□□□□□ -2.06
UBR1-205ENST00000564540 ANGPT1Q15389 498 aa2.16□□□□□ -2.06
UBR1-205ENST00000564540 VAMP3Q15836 100 aa2.16□□□□□ -2.06
UBR1-205ENST00000564540 USF2Q15853 346 aaPredicted RBP2.16□□□□□ -2.06
UBR1-205ENST00000564540 PSG3Q16557 428 aa2.16□□□□□ -2.06
UBR1-205ENST00000564540 FAM78AQ5JUQ0 283 aa2.16□□□□□ -2.06
UBR1-205ENST00000564540 DNAJC24Q6P3W2 148 aa2.16□□□□□ -2.06
UBR1-205ENST00000564540 CEMP1Q6PRD7 247 aaPredicted RBP2.16□□□□□ -2.06
UBR1-205ENST00000564540 SLC35D2Q76EJ3 337 aa2.16□□□□□ -2.06
UBR1-205ENST00000564540 BHLHA15Q7RTS1 189 aaPredicted RBP2.16□□□□□ -2.06
UBR1-205ENST00000564540 SNX20Q7Z614 316 aa2.16□□□□□ -2.06
UBR1-205ENST00000564540 LRRC8AQ8IWT6 810 aa2.16□□□□□ -2.06
UBR1-205ENST00000564540 SELENOHQ8IZQ5 122 aaKnown RBP2.16□□□□□ -2.06
UBR1-205ENST00000564540 OR51F2Q8NH61 342 aa2.16□□□□□ -2.06
UBR1-205ENST00000564540 BAALCQ8WXS3 180 aa2.16□□□□□ -2.06
UBR1-205ENST00000564540 TFGQ92734 400 aaPredicted RBP2.16□□□□□ -2.06
UBR1-205ENST00000564540 MRGPRFQ96AM1 343 aa2.16□□□□□ -2.06
UBR1-205ENST00000564540 COL21A1Q96P44 957 aa2.16□□□□□ -2.06
UBR1-205ENST00000564540 ZNF317Q96PQ6 595 aaPredicted RBP2.16□□□□□ -2.06
UBR1-205ENST00000564540 KCTD14Q9BQ13 255 aaPredicted RBP2.16□□□□□ -2.06
UBR1-205ENST00000564540 LZTS2Q9BRK4 669 aa2.16□□□□□ -2.06
UBR1-205ENST00000564540 FRMD8P1Q9BZ68 369 aaPredicted RBP2.16□□□□□ -2.06
UBR1-205ENST00000564540 PLA2G12AQ9BZM1 189 aa2.16□□□□□ -2.06
UBR1-205ENST00000564540 OR52A5Q9H2C5 316 aa2.16□□□□□ -2.06
UBR1-205ENST00000564540 TMEM38AQ9H6F2 299 aa2.16□□□□□ -2.06
UBR1-205ENST00000564540 KIR3DX1Q9H7L2 352 aa2.16□□□□□ -2.06
UBR1-205ENST00000564540 ISYNA1Q9NPH2 558 aa2.16□□□□□ -2.06
UBR1-205ENST00000564540 SAMSN1Q9NSI8 373 aaKnown RBP2.16□□□□□ -2.06
UBR1-205ENST00000564540 LGALS13Q9UHV8 139 aa2.16□□□□□ -2.06
UBR1-205ENST00000564540 ENPP5Q9UJA9 477 aa2.16□□□□□ -2.06
UBR1-205ENST00000564540 MRPS18BQ9Y676 258 aaKnown RBP2.16□□□□□ -2.06
UBR1-205ENST00000564540 IGKV3D-11A0A0A0MRZ8 115 aa2.15□□□□□ -2.07
UBR1-205ENST00000564540 ZNF816-ZNF321PA0A0X1KG74 233 aa2.15□□□□□ -2.07
UBR1-205ENST00000564540 TSPAN11A1L157 253 aa2.15□□□□□ -2.07
UBR1-205ENST00000564540 ZNF850A8MQ14 1090 aa2.15□□□□□ -2.07
UBR1-205ENST00000564540 CENPXA8MT69 81 aa2.15□□□□□ -2.07
UBR1-205ENST00000564540 F6UB75 175 aa2.15□□□□□ -2.07
UBR1-205ENST00000564540 RP2O75695 350 aa2.15□□□□□ -2.07
UBR1-205ENST00000564540 EIF3GO75821 320 aaKnown RBP eCLIP2.15□□□□□ -2.07
UBR1-205ENST00000564540 CBR3O75828 277 aa2.15□□□□□ -2.07
UBR1-205ENST00000564540 VAPBO95292 243 aa2.15□□□□□ -2.07
UBR1-205ENST00000564540 SMC2O95347 1197 aa2.15□□□□□ -2.07
UBR1-205ENST00000564540 HBE1P02100 147 aa2.15□□□□□ -2.07
UBR1-205ENST00000564540 GNAO1P09471 354 aa2.15□□□□□ -2.07
UBR1-205ENST00000564540 TACSTD2P09758 323 aa2.15□□□□□ -2.07
UBR1-205ENST00000564540 ZNF250P15622 560 aa2.15□□□□□ -2.07
UBR1-205ENST00000564540 RFC3P40938 356 aa2.15□□□□□ -2.07
UBR1-205ENST00000564540 KCNJ3P48549 501 aa2.15□□□□□ -2.07
UBR1-205ENST00000564540 RORCP51449 518 aa2.15□□□□□ -2.07
UBR1-205ENST00000564540 STXBP1P61764 594 aaKnown RBP2.15□□□□□ -2.07
UBR1-205ENST00000564540 ZNF92Q03936 586 aa2.15□□□□□ -2.07
UBR1-205ENST00000564540 ECH1Q13011 328 aa2.15□□□□□ -2.07
UBR1-205ENST00000564540 PRPSAP1Q14558 356 aa2.15□□□□□ -2.07
UBR1-205ENST00000564540 ZNF726P1Q15940 193 aa2.15□□□□□ -2.07
UBR1-205ENST00000564540 TNXAQ16473 311 aa2.15□□□□□ -2.07
UBR1-205ENST00000564540 SPECC1LQ69YQ0 1117 aa2.15□□□□□ -2.07
UBR1-205ENST00000564540 CLEC6AQ6EIG7 209 aa2.15□□□□□ -2.07
UBR1-205ENST00000564540 ADNP2Q6IQ32 1131 aa2.15□□□□□ -2.07
UBR1-205ENST00000564540 ABHD13Q7L211 337 aa2.15□□□□□ -2.07
UBR1-205ENST00000564540 SYS1Q8N2H4 156 aa2.15□□□□□ -2.07
UBR1-205ENST00000564540 TMEM54Q969K7 222 aa2.15□□□□□ -2.07
UBR1-205ENST00000564540 ARL5BQ96KC2 179 aa2.15□□□□□ -2.07
UBR1-205ENST00000564540 RNF157Q96PX1 679 aa2.15□□□□□ -2.07
UBR1-205ENST00000564540 TRNT1Q96Q11 434 aaKnown RBP2.15□□□□□ -2.07
UBR1-205ENST00000564540 ZNF382Q96SR6 550 aa2.15□□□□□ -2.07
UBR1-205ENST00000564540 CHRNA10Q9GZZ6 450 aa2.15□□□□□ -2.07
UBR1-205ENST00000564540 CD209Q9NNX6 404 aa2.15□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms