RNA–Protein interactions for RNA: ENST00000564172.1

GDE1-203, Transcript of glycerophosphodiester phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene GDE1, Length 2,238 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDE1-203ENST00000564172 TPBGQ13641 420 aa15.66■□□□□ 0.1
GDE1-203ENST00000564172 HLXQ14774 488 aaPredicted RBP15.66■□□□□ 0.1
GDE1-203ENST00000564172 RNFT1Q5M7Z0 435 aa15.66■□□□□ 0.1
GDE1-203ENST00000564172 DPPA2Q7Z7J5 298 aa15.66■□□□□ 0.1
GDE1-203ENST00000564172 PUSL1Q8N0Z8 303 aaKnown RBP15.66■□□□□ 0.1
GDE1-203ENST00000564172 OR6X1Q8NH79 312 aa15.66■□□□□ 0.1
GDE1-203ENST00000564172 SLC25A44Q96H78 314 aaPredicted RBP15.66■□□□□ 0.1
GDE1-203ENST00000564172 ACACAQ13085 2346 aa15.66■□□□□ 0.1
GDE1-203ENST00000564172 TRAV17A0A0B4J275 112 aa15.66■□□□□ 0.1
GDE1-203ENST00000564172 MCRIP1C9JLW8 97 aa15.66■□□□□ 0.1
GDE1-203ENST00000564172 ACOT7O00154 380 aa15.66■□□□□ 0.1
GDE1-203ENST00000564172 KRT33AO76009 404 aa15.66■□□□□ 0.1
GDE1-203ENST00000564172 SERPINA3P01011 423 aa15.66■□□□□ 0.1
GDE1-203ENST00000564172 HABP2Q14520 560 aaPredicted RBP15.66■□□□□ 0.1
GDE1-203ENST00000564172 SLC17A1Q14916 467 aa15.66■□□□□ 0.1
GDE1-203ENST00000564172 P2RY14Q15391 338 aa15.66■□□□□ 0.1
GDE1-203ENST00000564172 PXT1Q8NFP0 134 aa15.66■□□□□ 0.1
GDE1-203ENST00000564172 BPIFCQ8NFQ6 507 aa15.66■□□□□ 0.1
GDE1-203ENST00000564172 FOXN4Q96NZ1 517 aa15.66■□□□□ 0.1
GDE1-203ENST00000564172 WDR76Q9H967 626 aa15.66■□□□□ 0.1
GDE1-203ENST00000564172 LAMA5O15230 3695 aa15.65■□□□□ 0.1
GDE1-203ENST00000564172 IGKV1D-43A0A0B4J1Z2 117 aa15.65■□□□□ 0.1
GDE1-203ENST00000564172 ITGB2P05107 769 aa15.65■□□□□ 0.1
GDE1-203ENST00000564172 PGA4P0DJD7 388 aa15.65■□□□□ 0.1
GDE1-203ENST00000564172 PGA3P0DJD8 388 aa15.65■□□□□ 0.1
GDE1-203ENST00000564172 S100A11P31949 105 aa15.65■□□□□ 0.1
GDE1-203ENST00000564172 OR12D2P58182 307 aa15.65■□□□□ 0.1
GDE1-203ENST00000564172 THEM4Q5T1C6 240 aa15.65■□□□□ 0.1
GDE1-203ENST00000564172 ALKAL2Q6UX46 152 aa15.65■□□□□ 0.1
GDE1-203ENST00000564172 ARRDC1Q8N5I2 433 aa15.65■□□□□ 0.1
GDE1-203ENST00000564172 RXFP4Q8TDU9 374 aa15.65■□□□□ 0.1
GDE1-203ENST00000564172 C4orf36Q96KX1 117 aa15.65■□□□□ 0.1
GDE1-203ENST00000564172 TTTY10Q9BZA0 68 aa15.65■□□□□ 0.1
GDE1-203ENST00000564172 METTL9Q9H1A3 318 aa15.65■□□□□ 0.1
GDE1-203ENST00000564172 CRLF2Q9HC73 371 aa15.65■□□□□ 0.1
GDE1-203ENST00000564172 TXNL4BQ9NX01 149 aaKnown RBP15.65■□□□□ 0.1
GDE1-203ENST00000564172 PCDHB10Q9UN67 800 aa15.65■□□□□ 0.1
GDE1-203ENST00000564172 TP53TG5Q9Y2B4 290 aa15.65■□□□□ 0.1
GDE1-203ENST00000564172 COA3Q9Y2R0 106 aaPredicted RBP15.65■□□□□ 0.1
GDE1-203ENST00000564172 J3QLW9 94 aa15.64■□□□□ 0.09
GDE1-203ENST00000564172 IGHG1P01857 330 aa15.64■□□□□ 0.09
GDE1-203ENST00000564172 HLA-DQA2P01906 255 aa15.64■□□□□ 0.09
GDE1-203ENST00000564172 MT-ND5P03915 603 aa15.64■□□□□ 0.09
GDE1-203ENST00000564172 ZNF19P17023 458 aa15.64■□□□□ 0.09
GDE1-203ENST00000564172 CLDN17P56750 224 aa15.64■□□□□ 0.09
GDE1-203ENST00000564172 CLDN18P56856 261 aa15.64■□□□□ 0.09
GDE1-203ENST00000564172 GLO1Q04760 184 aa15.64■□□□□ 0.09
GDE1-203ENST00000564172 RBMS2Q15434 407 aaKnown RBP15.64■□□□□ 0.09
GDE1-203ENST00000564172 TMEM88Q6PEY1 159 aa15.64■□□□□ 0.09
GDE1-203ENST00000564172 DNM1P34Q6PK57 102 aa15.64■□□□□ 0.09
GDE1-203ENST00000564172 SPACA3Q8IXA5 215 aa15.64■□□□□ 0.09
GDE1-203ENST00000564172 ZFP41Q8N8Y5 198 aa15.64■□□□□ 0.09
GDE1-203ENST00000564172 OR9K2Q8NGE7 335 aa15.64■□□□□ 0.09
GDE1-203ENST00000564172 ELMOD3Q96FG2 381 aa15.64■□□□□ 0.09
GDE1-203ENST00000564172 INTS14Q96SY0 518 aa15.64■□□□□ 0.09
GDE1-203ENST00000564172 GPR61Q9BZJ8 451 aa15.64■□□□□ 0.09
GDE1-203ENST00000564172 EGLN1Q9GZT9 426 aa15.64■□□□□ 0.09
GDE1-203ENST00000564172 C19orf12Q9NSK7 152 aa15.64■□□□□ 0.09
GDE1-203ENST00000564172 MRPL22Q9NWU5 206 aaKnown RBP15.64■□□□□ 0.09
GDE1-203ENST00000564172 ZNF726A6NNF4 738 aa15.64■□□□□ 0.09
GDE1-203ENST00000564172 NPIPA2E9PIF3 369 aa15.64■□□□□ 0.09
GDE1-203ENST00000564172 NPIPA3F8WFD2 350 aa15.64■□□□□ 0.09
GDE1-203ENST00000564172 MAGEB4O15481 346 aaPredicted RBP15.64■□□□□ 0.09
GDE1-203ENST00000564172 ZNF708P17019 499 aa15.64■□□□□ 0.09
GDE1-203ENST00000564172 BDH1Q02338 343 aa15.64■□□□□ 0.09
GDE1-203ENST00000564172 GSG1Q2KHT4 349 aa15.64■□□□□ 0.09
GDE1-203ENST00000564172 DPY19L4Q7Z388 723 aa15.64■□□□□ 0.09
GDE1-203ENST00000564172 CDC20BQ86Y33 519 aa15.64■□□□□ 0.09
GDE1-203ENST00000564172 NOXO1Q8NFA2 376 aa15.64■□□□□ 0.09
GDE1-203ENST00000564172 OR6N2Q8NGY6 317 aa15.64■□□□□ 0.09
GDE1-203ENST00000564172 ZNF845Q96IR2 970 aaPredicted RBP15.64■□□□□ 0.09
GDE1-203ENST00000564172 ADAD1Q96M93 576 aaKnown RBP15.64■□□□□ 0.09
GDE1-203ENST00000564172 ZNF385AQ96PM9 386 aaKnown RBP15.64■□□□□ 0.09
GDE1-203ENST00000564172 SF3B5Q9BWJ5 86 aaKnown RBP15.64■□□□□ 0.09
GDE1-203ENST00000564172 DEFB127Q9H1M4 99 aa15.64■□□□□ 0.09
GDE1-203ENST00000564172 ZDHHC11Q9H8X9 412 aa15.64■□□□□ 0.09
GDE1-203ENST00000564172 UNKLQ9H9P5 680 aaKnown RBP15.64■□□□□ 0.09
GDE1-203ENST00000564172 NUDT15Q9NV35 164 aa15.64■□□□□ 0.09
GDE1-203ENST00000564172 CEP295Q9C0D2 2601 aa15.63■□□□□ 0.09
GDE1-203ENST00000564172 ZNF407Q9C0G0 2248 aa15.63■□□□□ 0.09
GDE1-203ENST00000564172 POM121CA8CG34 1229 aa15.63■□□□□ 0.09
GDE1-203ENST00000564172 SLC19A2O60779 497 aa15.63■□□□□ 0.09
GDE1-203ENST00000564172 SC5DO75845 299 aa15.63■□□□□ 0.09
GDE1-203ENST00000564172 TCRBP04435 133 aa15.63■□□□□ 0.09
GDE1-203ENST00000564172 CELP19835 753 aa15.63■□□□□ 0.09
GDE1-203ENST00000564172 NPR2P20594 1047 aa15.63■□□□□ 0.09
GDE1-203ENST00000564172 BTCP35070 178 aa15.63■□□□□ 0.09
GDE1-203ENST00000564172 RPS27P42677 84 aaKnown RBP15.63■□□□□ 0.09
GDE1-203ENST00000564172 HTR5AP47898 357 aa15.63■□□□□ 0.09
GDE1-203ENST00000564172 CLRN1P58418 232 aa15.63■□□□□ 0.09
GDE1-203ENST00000564172 RAB2AP61019 212 aa15.63■□□□□ 0.09
GDE1-203ENST00000564172 ACTA2P62736 377 aa15.63■□□□□ 0.09
GDE1-203ENST00000564172 ACTG2P63267 376 aa15.63■□□□□ 0.09
GDE1-203ENST00000564172 PMP22Q01453 160 aa15.63■□□□□ 0.09
GDE1-203ENST00000564172 TP53I3Q53FA7 332 aa15.63■□□□□ 0.09
GDE1-203ENST00000564172 OTPQ5XKR4 325 aa15.63■□□□□ 0.09
GDE1-203ENST00000564172 IGFL3Q6UXB1 125 aa15.63■□□□□ 0.09
GDE1-203ENST00000564172 NAA40Q86UY6 237 aa15.63■□□□□ 0.09
GDE1-203ENST00000564172 SYS1Q8N2H4 156 aa15.63■□□□□ 0.09
GDE1-203ENST00000564172 SNX33Q8WV41 574 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms