RNA–Protein interactions for RNA: ENST00000563739.5

SF3B3-204, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 1,105 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-204ENST00000563739 OR51A7Q8NH64 312 aa8.44□□□□□ -1.06
SF3B3-204ENST00000563739 FNDC8Q8TC99 324 aa8.44□□□□□ -1.06
SF3B3-204ENST00000563739 RORBQ92753 470 aa8.44□□□□□ -1.06
SF3B3-204ENST00000563739 APOBEC3DQ96AK3 386 aaPredicted RBP8.44□□□□□ -1.06
SF3B3-204ENST00000563739 BPIFA2Q96DR5 249 aa8.44□□□□□ -1.06
SF3B3-204ENST00000563739 NSL1Q96IY1 281 aa8.44□□□□□ -1.06
SF3B3-204ENST00000563739 COG8Q96MW5 612 aa8.44□□□□□ -1.06
SF3B3-204ENST00000563739 HOPXQ9BPY8 73 aaPredicted RBP8.44□□□□□ -1.06
SF3B3-204ENST00000563739 ZNF702PQ9H963 129 aa8.44□□□□□ -1.06
SF3B3-204ENST00000563739 CMTM6Q9NX76 183 aa8.44□□□□□ -1.06
SF3B3-204ENST00000563739 ERVK-18Q9QC07 812 aa8.44□□□□□ -1.06
SF3B3-204ENST00000563739 RNF7Q9UBF6 113 aa8.44□□□□□ -1.06
SF3B3-204ENST00000563739 ABCD2Q9UBJ2 740 aa8.44□□□□□ -1.06
SF3B3-204ENST00000563739 TAGLN3Q9UI15 199 aa8.44□□□□□ -1.06
SF3B3-204ENST00000563739 AP3M1Q9Y2T2 418 aa8.44□□□□□ -1.06
SF3B3-204ENST00000563739 ELOVL7A1L3X0 281 aa8.43□□□□□ -1.06
SF3B3-204ENST00000563739 PRSS37A4D1T9 235 aa8.43□□□□□ -1.06
SF3B3-204ENST00000563739 A6NIZ1 184 aa8.43□□□□□ -1.06
SF3B3-204ENST00000563739 H3BUX3 64 aa8.43□□□□□ -1.06
SF3B3-204ENST00000563739 NME4O00746 187 aa8.43□□□□□ -1.06
SF3B3-204ENST00000563739 FFAR1O14842 300 aa8.43□□□□□ -1.06
SF3B3-204ENST00000563739 TFF1P04155 84 aa8.43□□□□□ -1.06
SF3B3-204ENST00000563739 IFI30P13284 250 aa8.43□□□□□ -1.06
SF3B3-204ENST00000563739 IGLL1P15814 213 aa8.43□□□□□ -1.06
SF3B3-204ENST00000563739 RASSF2P50749 326 aa8.43□□□□□ -1.06
SF3B3-204ENST00000563739 RAP1BP61224 184 aa8.43□□□□□ -1.06
SF3B3-204ENST00000563739 PSME3P61289 254 aa8.43□□□□□ -1.06
SF3B3-204ENST00000563739 LSM6P62312 80 aaKnown RBP8.43□□□□□ -1.06
SF3B3-204ENST00000563739 RAP1AP62834 184 aa8.43□□□□□ -1.06
SF3B3-204ENST00000563739 COL10A1Q03692 680 aa8.43□□□□□ -1.06
SF3B3-204ENST00000563739 CORO6Q6QEF8 472 aa8.43□□□□□ -1.06
SF3B3-204ENST00000563739 CFAP77Q6ZQR2 320 aa8.43□□□□□ -1.06
SF3B3-204ENST00000563739 TSEN54Q7Z6J9 526 aaKnown RBP8.43□□□□□ -1.06
SF3B3-204ENST00000563739 SLC15A3Q8IY34 581 aa8.43□□□□□ -1.06
SF3B3-204ENST00000563739 OR2T12Q8NG77 320 aa8.43□□□□□ -1.06
SF3B3-204ENST00000563739 C8orf46Q8TAG6 207 aa8.43□□□□□ -1.06
SF3B3-204ENST00000563739 SGCDQ92629 289 aa8.43□□□□□ -1.06
SF3B3-204ENST00000563739 ERGIC1Q969X5 290 aa8.43□□□□□ -1.06
SF3B3-204ENST00000563739 SLC7A6OSQ96CW6 309 aaPredicted RBP8.43□□□□□ -1.06
SF3B3-204ENST00000563739 ZNF583Q96ND8 569 aa8.43□□□□□ -1.06
SF3B3-204ENST00000563739 COQ7Q99807 217 aa8.43□□□□□ -1.06
SF3B3-204ENST00000563739 SYT4Q9H2B2 425 aa8.43□□□□□ -1.06
SF3B3-204ENST00000563739 SPAG4Q9NPE6 437 aa8.43□□□□□ -1.06
SF3B3-204ENST00000563739 TMEM100Q9NV29 134 aa8.43□□□□□ -1.06
SF3B3-204ENST00000563739 DNAJB11Q9UBS4 358 aa8.43□□□□□ -1.06
SF3B3-204ENST00000563739 COA3Q9Y2R0 106 aaPredicted RBP8.43□□□□□ -1.06
SF3B3-204ENST00000563739 SH3GLB1Q9Y371 365 aa8.43□□□□□ -1.06
SF3B3-204ENST00000563739 MED31Q9Y3C7 131 aa8.43□□□□□ -1.06
SF3B3-204ENST00000563739 SNX13Q9Y5W8 968 aa8.43□□□□□ -1.06
SF3B3-204ENST00000563739 IGLV1-36A0A0B4J1U3 117 aa8.42□□□□□ -1.06
SF3B3-204ENST00000563739 A0A1B0GVI7 797 aa8.42□□□□□ -1.06
SF3B3-204ENST00000563739 J3KTA2 159 aa8.42□□□□□ -1.06
SF3B3-204ENST00000563739 PPP1R3DO95685 299 aa8.42□□□□□ -1.06
SF3B3-204ENST00000563739 CALB2P22676 271 aa8.42□□□□□ -1.06
SF3B3-204ENST00000563739 CA6P23280 308 aa8.42□□□□□ -1.06
SF3B3-204ENST00000563739 GSK3BP49841 420 aa8.42□□□□□ -1.06
SF3B3-204ENST00000563739 TAS2R41P59536 307 aa8.42□□□□□ -1.06
SF3B3-204ENST00000563739 LIPEQ05469 1076 aa8.42□□□□□ -1.06
SF3B3-204ENST00000563739 PCK2Q16822 640 aa8.42□□□□□ -1.06
SF3B3-204ENST00000563739 NSUN5P1Q3KNT7 163 aa8.42□□□□□ -1.06
SF3B3-204ENST00000563739 WDR38Q5JTN6 314 aa8.42□□□□□ -1.06
SF3B3-204ENST00000563739 NRMQ8IXM6 262 aa8.42□□□□□ -1.06
SF3B3-204ENST00000563739 PGAM4Q8N0Y7 254 aa8.42□□□□□ -1.06
SF3B3-204ENST00000563739 BOLLQ8N9W6 283 aaKnown RBP8.42□□□□□ -1.06
SF3B3-204ENST00000563739 BEND2Q8NDZ0 799 aa8.42□□□□□ -1.06
SF3B3-204ENST00000563739 WFDC9Q8NEX5 89 aa8.42□□□□□ -1.06
SF3B3-204ENST00000563739 OR5R1Q8NH85 324 aa8.42□□□□□ -1.06
SF3B3-204ENST00000563739 ST8SIA4Q92187 359 aa8.42□□□□□ -1.06
SF3B3-204ENST00000563739 KCTD12Q96CX2 325 aaKnown RBP8.42□□□□□ -1.06
SF3B3-204ENST00000563739 WWC2-AS2Q96NR7 200 aa8.42□□□□□ -1.06
SF3B3-204ENST00000563739 TSSK2Q96PF2 358 aa8.42□□□□□ -1.06
SF3B3-204ENST00000563739 RAB3IPQ96QF0 476 aaPredicted RBP8.42□□□□□ -1.06
SF3B3-204ENST00000563739 ADAT1Q9BUB4 502 aaKnown RBP8.42□□□□□ -1.06
SF3B3-204ENST00000563739 POLR2J2Q9GZM3 115 aaKnown RBP8.42□□□□□ -1.06
SF3B3-204ENST00000563739 POLR2J3Q9H1A7 115 aaKnown RBP8.42□□□□□ -1.06
SF3B3-204ENST00000563739 PPP1R3EQ9H7J1 279 aa8.42□□□□□ -1.06
SF3B3-204ENST00000563739 CNTD2Q9H8S5 307 aa8.42□□□□□ -1.06
SF3B3-204ENST00000563739 GMPR2Q9P2T1 348 aaKnown RBP8.42□□□□□ -1.06
SF3B3-204ENST00000563739 MAB21L2Q9Y586 359 aa8.42□□□□□ -1.06
SF3B3-204ENST00000563739 A0A087WUU8 490 aa8.41□□□□□ -1.06
SF3B3-204ENST00000563739 ACOT8O14734 319 aa8.41□□□□□ -1.06
SF3B3-204ENST00000563739 XPNPEP2O43895 674 aa8.41□□□□□ -1.06
SF3B3-204ENST00000563739 CD14P08571 375 aa8.41□□□□□ -1.06
SF3B3-204ENST00000563739 SLC9A3P48764 834 aa8.41□□□□□ -1.06
SF3B3-204ENST00000563739 MNAT1P51948 309 aa8.41□□□□□ -1.06
SF3B3-204ENST00000563739 PRKCDQ05655 676 aa8.41□□□□□ -1.06
SF3B3-204ENST00000563739 KRR1Q13601 381 aaKnown RBP8.41□□□□□ -1.06
SF3B3-204ENST00000563739 LY6EQ16553 131 aa8.41□□□□□ -1.06
SF3B3-204ENST00000563739 SNAI3Q3KNW1 292 aa8.41□□□□□ -1.06
SF3B3-204ENST00000563739 ZBTB37Q5TC79 503 aa8.41□□□□□ -1.06
SF3B3-204ENST00000563739 TBPL2Q6SJ96 375 aa8.41□□□□□ -1.06
SF3B3-204ENST00000563739 Q6ZS46 218 aa8.41□□□□□ -1.06
SF3B3-204ENST00000563739 OFCC1Q8IZS5 231 aa8.41□□□□□ -1.06
SF3B3-204ENST00000563739 Q8N2B8 174 aa8.41□□□□□ -1.06
SF3B3-204ENST00000563739 OR11L1Q8NGX0 322 aa8.41□□□□□ -1.06
SF3B3-204ENST00000563739 OR2AE1Q8NHA4 323 aa8.41□□□□□ -1.06
SF3B3-204ENST00000563739 NPRL2Q8WTW4 380 aa8.41□□□□□ -1.06
SF3B3-204ENST00000563739 PRRC1Q96M27 445 aa8.41□□□□□ -1.06
SF3B3-204ENST00000563739 CCL13Q99616 98 aa8.41□□□□□ -1.06
SF3B3-204ENST00000563739 CITED2Q99967 270 aaPredicted RBP8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms