RNA–Protein interactions for RNA: ENST00000561960.5

NSMCE1-202, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 609 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-202ENST00000561960 AURKAIP1Q9NWT8 199 aaPredicted RBP9.58□□□□□ -0.88
NSMCE1-202ENST00000561960 SIGLEC7Q9Y286 467 aa9.58□□□□□ -0.88
NSMCE1-202ENST00000561960 V9GYQ6 96 aa9.58□□□□□ -0.88
NSMCE1-202ENST00000561960 TRBV4-1A0A0J9YWV2 114 aa9.57□□□□□ -0.88
NSMCE1-202ENST00000561960 NPFFO15130 113 aa9.57□□□□□ -0.88
NSMCE1-202ENST00000561960 PAHP00439 452 aa9.57□□□□□ -0.88
NSMCE1-202ENST00000561960 SERPINA1P01009 418 aa9.57□□□□□ -0.88
NSMCE1-202ENST00000561960 IFNA14P01570 189 aa9.57□□□□□ -0.88
NSMCE1-202ENST00000561960 OPN1MWP04001 364 aa9.57□□□□□ -0.88
NSMCE1-202ENST00000561960 FBP1P09467 338 aa9.57□□□□□ -0.88
NSMCE1-202ENST00000561960 OPN1MW2P0DN77 364 aa9.57□□□□□ -0.88
NSMCE1-202ENST00000561960 OPN1MW3P0DN78 364 aa9.57□□□□□ -0.88
NSMCE1-202ENST00000561960 PYCR1P32322 319 aa9.57□□□□□ -0.88
NSMCE1-202ENST00000561960 SAA4P35542 130 aa9.57□□□□□ -0.88
NSMCE1-202ENST00000561960 BPIFB3P59826 476 aa9.57□□□□□ -0.88
NSMCE1-202ENST00000561960 CDONQ4KMG0 1287 aa9.57□□□□□ -0.88
NSMCE1-202ENST00000561960 SLC35F1Q5T1Q4 408 aa9.57□□□□□ -0.88
NSMCE1-202ENST00000561960 SMARCD3Q6STE5 483 aa9.57□□□□□ -0.88
NSMCE1-202ENST00000561960 Q6ZTK2 550 aa9.57□□□□□ -0.88
NSMCE1-202ENST00000561960 RRM2BQ7LG56 351 aa9.57□□□□□ -0.88
NSMCE1-202ENST00000561960 Q8N7P7 452 aa9.57□□□□□ -0.88
NSMCE1-202ENST00000561960 OR8J3Q8NGG0 315 aa9.57□□□□□ -0.88
NSMCE1-202ENST00000561960 OR56B2PQ8NGI1 322 aa9.57□□□□□ -0.88
NSMCE1-202ENST00000561960 OR51L1Q8NGJ5 315 aa9.57□□□□□ -0.88
NSMCE1-202ENST00000561960 SLC7A13Q8TCU3 470 aa9.57□□□□□ -0.88
NSMCE1-202ENST00000561960 MAP6Q96JE9 813 aa9.57□□□□□ -0.88
NSMCE1-202ENST00000561960 PNRC2Q9NPJ4 139 aaKnown RBP9.57□□□□□ -0.88
NSMCE1-202ENST00000561960 NRIP3Q9NQ35 241 aa9.57□□□□□ -0.88
NSMCE1-202ENST00000561960 CMTM6Q9NX76 183 aa9.57□□□□□ -0.88
NSMCE1-202ENST00000561960 B9D1Q9UPM9 204 aa9.57□□□□□ -0.88
NSMCE1-202ENST00000561960 TRAV38-1A0A0B4J264 116 aa9.56□□□□□ -0.88
NSMCE1-202ENST00000561960 A0A1B0GWJ7 208 aa9.56□□□□□ -0.88
NSMCE1-202ENST00000561960 UNC119BA6NIH7 251 aa9.56□□□□□ -0.88
NSMCE1-202ENST00000561960 M0R135 149 aa9.56□□□□□ -0.88
NSMCE1-202ENST00000561960 PTP4A3O75365 173 aa9.56□□□□□ -0.88
NSMCE1-202ENST00000561960 LIPFP07098 398 aa9.56□□□□□ -0.88
NSMCE1-202ENST00000561960 TROVE2P10155 538 aaKnown RBP eCLIP9.56□□□□□ -0.88
NSMCE1-202ENST00000561960 HIST1H1CP16403 213 aaKnown RBP9.56□□□□□ -0.88
NSMCE1-202ENST00000561960 IFNA8P32881 189 aa9.56□□□□□ -0.88
NSMCE1-202ENST00000561960 PRKXP51817 358 aa9.56□□□□□ -0.88
NSMCE1-202ENST00000561960 ECH1Q13011 328 aa9.56□□□□□ -0.88
NSMCE1-202ENST00000561960 HERPUD1Q15011 391 aa9.56□□□□□ -0.88
NSMCE1-202ENST00000561960 GFOD2Q3B7J2 385 aa9.56□□□□□ -0.88
NSMCE1-202ENST00000561960 KRTAP27-1Q3LI81 207 aa9.56□□□□□ -0.88
NSMCE1-202ENST00000561960 ERICH5Q6P6B1 374 aa9.56□□□□□ -0.88
NSMCE1-202ENST00000561960 CCBE1Q6UXH8 406 aaPredicted RBP9.56□□□□□ -0.88
NSMCE1-202ENST00000561960 COLCA1Q6ZS62 124 aa9.56□□□□□ -0.88
NSMCE1-202ENST00000561960 TMPRSS11FQ6ZWK6 438 aa9.56□□□□□ -0.88
NSMCE1-202ENST00000561960 SLC26A10Q8NG04 563 aa9.56□□□□□ -0.88
NSMCE1-202ENST00000561960 OR2AJ1Q8NGZ0 328 aa9.56□□□□□ -0.88
NSMCE1-202ENST00000561960 FANK1Q8TC84 345 aa9.56□□□□□ -0.88
NSMCE1-202ENST00000561960 ZNRF4Q8WWF5 429 aa9.56□□□□□ -0.88
NSMCE1-202ENST00000561960 LRTOMTQ8WZ04 291 aa9.56□□□□□ -0.88
NSMCE1-202ENST00000561960 RCN3Q96D15 328 aa9.56□□□□□ -0.88
NSMCE1-202ENST00000561960 ZNF799Q96GE5 643 aa9.56□□□□□ -0.88
NSMCE1-202ENST00000561960 OR5M11Q96RB7 305 aa9.56□□□□□ -0.88
NSMCE1-202ENST00000561960 MMP28Q9H239 520 aa9.56□□□□□ -0.88
NSMCE1-202ENST00000561960 INTS9Q9NV88 658 aaKnown RBP9.56□□□□□ -0.88
NSMCE1-202ENST00000561960 MRPL22Q9NWU5 206 aaKnown RBP9.56□□□□□ -0.88
NSMCE1-202ENST00000561960 AURKCQ9UQB9 309 aa9.56□□□□□ -0.88
NSMCE1-202ENST00000561960 CAPN7Q9Y6W3 813 aa9.56□□□□□ -0.88
NSMCE1-202ENST00000561960 TENM3Q9P273 2699 aa9.56□□□□□ -0.88
NSMCE1-202ENST00000561960 A0A1B0GVI7 797 aa9.55□□□□□ -0.88
NSMCE1-202ENST00000561960 A0A1W2PRX2 142 aa9.55□□□□□ -0.88
NSMCE1-202ENST00000561960 CXCR6O00574 342 aa9.55□□□□□ -0.88
NSMCE1-202ENST00000561960 GSTA4O15217 222 aa9.55□□□□□ -0.88
NSMCE1-202ENST00000561960 TBX1O43435 398 aa9.55□□□□□ -0.88
NSMCE1-202ENST00000561960 CHST1O43916 411 aa9.55□□□□□ -0.88
NSMCE1-202ENST00000561960 TSPAN9O75954 239 aa9.55□□□□□ -0.88
NSMCE1-202ENST00000561960 MPIG6BO95866 241 aa9.55□□□□□ -0.88
NSMCE1-202ENST00000561960 CD28P10747 220 aa9.55□□□□□ -0.88
NSMCE1-202ENST00000561960 OMPP47874 163 aa9.55□□□□□ -0.88
NSMCE1-202ENST00000561960 RPL15P61313 204 aaKnown RBP9.55□□□□□ -0.88
NSMCE1-202ENST00000561960 KLF10Q13118 480 aa9.55□□□□□ -0.88
NSMCE1-202ENST00000561960 KCNJ8Q15842 424 aa9.55□□□□□ -0.88
NSMCE1-202ENST00000561960 KCNMB1Q16558 191 aa9.55□□□□□ -0.88
NSMCE1-202ENST00000561960 RFX4Q33E94 735 aa9.55□□□□□ -0.88
NSMCE1-202ENST00000561960 ANKDD1AQ495B1 522 aa9.55□□□□□ -0.88
NSMCE1-202ENST00000561960 IFI44LQ53G44 452 aa9.55□□□□□ -0.88
NSMCE1-202ENST00000561960 KPRPQ5T749 579 aaPredicted RBP9.55□□□□□ -0.88
NSMCE1-202ENST00000561960 AGBL2Q5U5Z8 902 aa9.55□□□□□ -0.88
NSMCE1-202ENST00000561960 FAM86B1Q8N7N1 296 aa9.55□□□□□ -0.88
NSMCE1-202ENST00000561960 CELF2-AS1Q8N7Q2 184 aa9.55□□□□□ -0.88
NSMCE1-202ENST00000561960 CYB561A3Q8NBI2 242 aa9.55□□□□□ -0.88
NSMCE1-202ENST00000561960 SH3GL1Q99961 368 aa9.55□□□□□ -0.88
NSMCE1-202ENST00000561960 WACQ9BTA9 647 aa9.55□□□□□ -0.88
NSMCE1-202ENST00000561960 WDR13Q9H1Z4 485 aa9.55□□□□□ -0.88
NSMCE1-202ENST00000561960 OR6C68A6NDL8 312 aa9.54□□□□□ -0.88
NSMCE1-202ENST00000561960 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.54□□□□□ -0.88
NSMCE1-202ENST00000561960 J3QW42 95 aa9.54□□□□□ -0.88
NSMCE1-202ENST00000561960 FSTL3O95633 263 aa9.54□□□□□ -0.88
NSMCE1-202ENST00000561960 H1F0P07305 194 aaKnown RBP9.54□□□□□ -0.88
NSMCE1-202ENST00000561960 AMY2BP19961 511 aa9.54□□□□□ -0.88
NSMCE1-202ENST00000561960 CPT2P23786 658 aa9.54□□□□□ -0.88
NSMCE1-202ENST00000561960 TGFBR2P37173 567 aa9.54□□□□□ -0.88
NSMCE1-202ENST00000561960 RPS6KA3P51812 740 aa9.54□□□□□ -0.88
NSMCE1-202ENST00000561960 BMXP51813 675 aa9.54□□□□□ -0.88
NSMCE1-202ENST00000561960 EFNB2P52799 333 aa9.54□□□□□ -0.88
NSMCE1-202ENST00000561960 TPTEP56180 551 aa9.54□□□□□ -0.88
NSMCE1-202ENST00000561960 ERVFRD-1P60508 538 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms