RNA–Protein interactions for RNA: ENST00000553837.5

SHMT2-207, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 2,152 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-207ENST00000553837 OR1N1Q8NGS0 311 aa10.92□□□□□ -0.66
SHMT2-207ENST00000553837 NUDCD2Q8WVJ2 157 aa10.92□□□□□ -0.66
SHMT2-207ENST00000553837 OIT3Q8WWZ8 545 aa10.92□□□□□ -0.66
SHMT2-207ENST00000553837 SLC25A36Q96CQ1 311 aa10.92□□□□□ -0.66
SHMT2-207ENST00000553837 SLC41A2Q96JW4 573 aa10.92□□□□□ -0.66
SHMT2-207ENST00000553837 HRH4Q9H3N8 390 aa10.92□□□□□ -0.66
SHMT2-207ENST00000553837 GFOD1Q9NXC2 390 aa10.92□□□□□ -0.66
SHMT2-207ENST00000553837 ZNF107Q9UII5 783 aaPredicted RBP10.92□□□□□ -0.66
SHMT2-207ENST00000553837 CABIN1Q9Y6J0 2220 aa10.92□□□□□ -0.66
SHMT2-207ENST00000553837 LOC100289279A0A1B0GTE1 492 aa10.92□□□□□ -0.66
SHMT2-207ENST00000553837 OR4C45A6NMZ5 311 aa10.92□□□□□ -0.66
SHMT2-207ENST00000553837 ZNF736B4DX44 427 aaPredicted RBP10.92□□□□□ -0.66
SHMT2-207ENST00000553837 NUDT21O43809 227 aaKnown RBP10.92□□□□□ -0.66
SHMT2-207ENST00000553837 LY86O95711 162 aa10.92□□□□□ -0.66
SHMT2-207ENST00000553837 NUDT14O95848 222 aa10.92□□□□□ -0.66
SHMT2-207ENST00000553837 CYB5AP00167 134 aa10.92□□□□□ -0.66
SHMT2-207ENST00000553837 CXCR1P25024 350 aa10.92□□□□□ -0.66
SHMT2-207ENST00000553837 ITGA3P26006 1051 aa10.92□□□□□ -0.66
SHMT2-207ENST00000553837 F2RL1P55085 397 aa10.92□□□□□ -0.66
SHMT2-207ENST00000553837 CASP6P55212 293 aa10.92□□□□□ -0.66
SHMT2-207ENST00000553837 CD81P60033 236 aa10.92□□□□□ -0.66
SHMT2-207ENST00000553837 COTL1Q14019 142 aa10.92□□□□□ -0.66
SHMT2-207ENST00000553837 SCGB2B2Q4G0G5 96 aa10.92□□□□□ -0.66
SHMT2-207ENST00000553837 COX15Q7KZN9 410 aa10.92□□□□□ -0.66
SHMT2-207ENST00000553837 BPIFB2Q8N4F0 458 aa10.92□□□□□ -0.66
SHMT2-207ENST00000553837 PAQR4Q8N4S7 273 aaPredicted RBP10.92□□□□□ -0.66
SHMT2-207ENST00000553837 MITD1Q8WV92 249 aa10.92□□□□□ -0.66
SHMT2-207ENST00000553837 FAM3DQ96BQ1 224 aa10.92□□□□□ -0.66
SHMT2-207ENST00000553837 ZNF501Q96CX3 271 aaPredicted RBP10.92□□□□□ -0.66
SHMT2-207ENST00000553837 ULBP3Q9BZM4 244 aa10.92□□□□□ -0.66
SHMT2-207ENST00000553837 SELENOIQ9C0D9 397 aa10.92□□□□□ -0.66
SHMT2-207ENST00000553837 OR11A1Q9GZK7 315 aa10.92□□□□□ -0.66
SHMT2-207ENST00000553837 COMMD4Q9H0A8 199 aa10.92□□□□□ -0.66
SHMT2-207ENST00000553837 KCNG2Q9UJ96 466 aa10.92□□□□□ -0.66
SHMT2-207ENST00000553837 TRAV36DV7A0A075B6V5 113 aa10.91□□□□□ -0.66
SHMT2-207ENST00000553837 A0A0B4J2A0 478 aa10.91□□□□□ -0.66
SHMT2-207ENST00000553837 CPED1A4D0V7 1026 aa10.91□□□□□ -0.66
SHMT2-207ENST00000553837 C2orf72A6NCS6 295 aa10.91□□□□□ -0.66
SHMT2-207ENST00000553837 MFNGO00587 321 aa10.91□□□□□ -0.66
SHMT2-207ENST00000553837 NPIPB7O75200 414 aa10.91□□□□□ -0.66
SHMT2-207ENST00000553837 IFNA2P01563 188 aa10.91□□□□□ -0.66
SHMT2-207ENST00000553837 ZNF735P0CB33 412 aa10.91□□□□□ -0.66
SHMT2-207ENST00000553837 SLC2A1P11166 492 aa10.91□□□□□ -0.66
SHMT2-207ENST00000553837 CPT2P23786 658 aa10.91□□□□□ -0.66
SHMT2-207ENST00000553837 SLC6A8P48029 635 aa10.91□□□□□ -0.66
SHMT2-207ENST00000553837 HMGN3Q15651 99 aa10.91□□□□□ -0.66
SHMT2-207ENST00000553837 RAB11BQ15907 218 aa10.91□□□□□ -0.66
SHMT2-207ENST00000553837 NKPD1Q17RQ9 610 aa10.91□□□□□ -0.66
SHMT2-207ENST00000553837 EMC4Q5J8M3 183 aa10.91□□□□□ -0.66
SHMT2-207ENST00000553837 OR10H5Q8NGA6 315 aa10.91□□□□□ -0.66
SHMT2-207ENST00000553837 OR2G2Q8NGZ5 317 aa10.91□□□□□ -0.66
SHMT2-207ENST00000553837 GPR148Q8TDV2 347 aa10.91□□□□□ -0.66
SHMT2-207ENST00000553837 DCUN1D4Q92564 292 aa10.91□□□□□ -0.66
SHMT2-207ENST00000553837 TMEM106AQ96A25 262 aa10.91□□□□□ -0.66
SHMT2-207ENST00000553837 CDC6Q99741 560 aa10.91□□□□□ -0.66
SHMT2-207ENST00000553837 MICU1Q9BPX6 476 aa10.91□□□□□ -0.66
SHMT2-207ENST00000553837 NAA11Q9BSU3 229 aaPredicted RBP10.91□□□□□ -0.66
SHMT2-207ENST00000553837 TBL1XR1Q9BZK7 514 aa10.91□□□□□ -0.66
SHMT2-207ENST00000553837 TOLLIPQ9H0E2 274 aa10.91□□□□□ -0.66
SHMT2-207ENST00000553837 METTL9Q9H1A3 318 aa10.91□□□□□ -0.66
SHMT2-207ENST00000553837 TUBA4BQ9H853 241 aa10.91□□□□□ -0.66
SHMT2-207ENST00000553837 CYTL1Q9NRR1 136 aa10.91□□□□□ -0.66
SHMT2-207ENST00000553837 SEMA5BQ9P283 1151 aa10.91□□□□□ -0.66
SHMT2-207ENST00000553837 SHPKQ9UHJ6 478 aa10.91□□□□□ -0.66
SHMT2-207ENST00000553837 IKZF2Q9UKS7 526 aa10.91□□□□□ -0.66
SHMT2-207ENST00000553837 PCDHGA1Q9Y5H4 931 aa10.91□□□□□ -0.66
SHMT2-207ENST00000553837 WIF1Q9Y5W5 379 aa10.91□□□□□ -0.66
SHMT2-207ENST00000553837 CPAMD8Q8IZJ3 1885 aa10.91□□□□□ -0.66
SHMT2-207ENST00000553837 CACNA1CQ13936 2221 aa10.9□□□□□ -0.66
SHMT2-207ENST00000553837 TMEM265A0A087WTH1 108 aa10.9□□□□□ -0.66
SHMT2-207ENST00000553837 TRBV6-7A0A0A0MS04 114 aa10.9□□□□□ -0.66
SHMT2-207ENST00000553837 A0A1W2PPE3 182 aa10.9□□□□□ -0.66
SHMT2-207ENST00000553837 A0A1W2PQD3 144 aa10.9□□□□□ -0.66
SHMT2-207ENST00000553837 AP4M1O00189 453 aa10.9□□□□□ -0.66
SHMT2-207ENST00000553837 DUX1O43812 170 aa10.9□□□□□ -0.66
SHMT2-207ENST00000553837 IL2RAP01589 272 aa10.9□□□□□ -0.66
SHMT2-207ENST00000553837 DCNP07585 359 aaKnown RBP10.9□□□□□ -0.66
SHMT2-207ENST00000553837 IL11P20809 199 aa10.9□□□□□ -0.66
SHMT2-207ENST00000553837 KIR3DL2P43630 455 aa10.9□□□□□ -0.66
SHMT2-207ENST00000553837 DCAF7P61962 342 aa10.9□□□□□ -0.66
SHMT2-207ENST00000553837 RAC1P63000 192 aa10.9□□□□□ -0.66
SHMT2-207ENST00000553837 IL13RA1P78552 427 aa10.9□□□□□ -0.66
SHMT2-207ENST00000553837 CYCSP99999 105 aaKnown RBP10.9□□□□□ -0.66
SHMT2-207ENST00000553837 MEF2DQ14814 521 aa10.9□□□□□ -0.66
SHMT2-207ENST00000553837 SHBQ15464 509 aa10.9□□□□□ -0.66
SHMT2-207ENST00000553837 ACKR1Q16570 336 aa10.9□□□□□ -0.66
SHMT2-207ENST00000553837 HLA-DQA1Q5Y7H0 255 aa10.9□□□□□ -0.66
SHMT2-207ENST00000553837 AWAT2Q6E213 333 aa10.9□□□□□ -0.66
SHMT2-207ENST00000553837 NUP54Q7Z3B4 507 aa10.9□□□□□ -0.66
SHMT2-207ENST00000553837 BIVMQ86UB2 503 aa10.9□□□□□ -0.66
SHMT2-207ENST00000553837 PLXDC1Q8IUK5 500 aa10.9□□□□□ -0.66
SHMT2-207ENST00000553837 WDFY1Q8IWB7 410 aa10.9□□□□□ -0.66
SHMT2-207ENST00000553837 ZNF676Q8N7Q3 588 aa10.9□□□□□ -0.66
SHMT2-207ENST00000553837 KDF1Q8NAX2 398 aaPredicted RBP10.9□□□□□ -0.66
SHMT2-207ENST00000553837 SLC38A9Q8NBW4 561 aa10.9□□□□□ -0.66
SHMT2-207ENST00000553837 OR6X1Q8NH79 312 aa10.9□□□□□ -0.66
SHMT2-207ENST00000553837 GPR119Q8TDV5 335 aa10.9□□□□□ -0.66
SHMT2-207ENST00000553837 DAZLQ92904 295 aaKnown RBP10.9□□□□□ -0.66
SHMT2-207ENST00000553837 PPP1R14AQ96A00 147 aa10.9□□□□□ -0.66
SHMT2-207ENST00000553837 SMIM8Q96KF7 97 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms