RNA–Protein interactions for RNA: ENST00000553278.1

SCFD1-208, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 795 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-208ENST00000553278 ARL9Q6T311 187 aa4.13□□□□□ -1.75
SCFD1-208ENST00000553278 LRRC6Q86X45 466 aa4.13□□□□□ -1.75
SCFD1-208ENST00000553278 CRLF3Q8IUI8 442 aa4.13□□□□□ -1.75
SCFD1-208ENST00000553278 NELFCDQ8IXH7 590 aa4.13□□□□□ -1.75
SCFD1-208ENST00000553278 PRSS58Q8IYP2 241 aa4.13□□□□□ -1.75
SCFD1-208ENST00000553278 METTL13Q8N6R0 699 aa4.13□□□□□ -1.75
SCFD1-208ENST00000553278 COX18Q8N8Q8 333 aa4.13□□□□□ -1.75
SCFD1-208ENST00000553278 C11orf72Q8NBR9 251 aa4.13□□□□□ -1.75
SCFD1-208ENST00000553278 OR2Y1Q8NGV0 311 aa4.13□□□□□ -1.75
SCFD1-208ENST00000553278 RNF185Q96GF1 192 aa4.13□□□□□ -1.75
SCFD1-208ENST00000553278 ADTRPQ96IZ2 230 aa4.13□□□□□ -1.75
SCFD1-208ENST00000553278 ZNF514Q96K75 400 aaPredicted RBP4.13□□□□□ -1.75
SCFD1-208ENST00000553278 OR2M2Q96R28 347 aa4.13□□□□□ -1.75
SCFD1-208ENST00000553278 UPF3BQ9BZI7 483 aaKnown RBP4.13□□□□□ -1.75
SCFD1-208ENST00000553278 SRRQ9GZT4 340 aa4.13□□□□□ -1.75
SCFD1-208ENST00000553278 OR51B5Q9H339 312 aa4.13□□□□□ -1.75
SCFD1-208ENST00000553278 WDR55Q9H6Y2 383 aaPredicted RBP4.13□□□□□ -1.75
SCFD1-208ENST00000553278 ISYNA1Q9NPH2 558 aa4.13□□□□□ -1.75
SCFD1-208ENST00000553278 MMP26Q9NRE1 261 aa4.13□□□□□ -1.75
SCFD1-208ENST00000553278 TREX1Q9NSU2 369 aa4.13□□□□□ -1.75
SCFD1-208ENST00000553278 RAB23Q9ULC3 237 aa4.13□□□□□ -1.75
SCFD1-208ENST00000553278 SLC22A14Q9Y267 594 aa4.13□□□□□ -1.75
SCFD1-208ENST00000553278 AP3M1Q9Y2T2 418 aa4.13□□□□□ -1.75
SCFD1-208ENST00000553278 COL5A2P05997 1499 aaPredicted RBP4.12□□□□□ -1.75
SCFD1-208ENST00000553278 F8VZ95 297 aa4.12□□□□□ -1.75
SCFD1-208ENST00000553278 TNFAIP8O95379 198 aa4.12□□□□□ -1.75
SCFD1-208ENST00000553278 INSP01308 110 aa4.12□□□□□ -1.75
SCFD1-208ENST00000553278 OCMP0CE72 109 aaPredicted RBP4.12□□□□□ -1.75
SCFD1-208ENST00000553278 SLC35E2BP0CK96 405 aa4.12□□□□□ -1.75
SCFD1-208ENST00000553278 HTR1DP28221 377 aa4.12□□□□□ -1.75
SCFD1-208ENST00000553278 KDELR2P33947 212 aa4.12□□□□□ -1.75
SCFD1-208ENST00000553278 MAGEA6P43360 314 aa4.12□□□□□ -1.75
SCFD1-208ENST00000553278 CACNG7P62955 275 aa4.12□□□□□ -1.75
SCFD1-208ENST00000553278 STX4Q12846 297 aa4.12□□□□□ -1.75
SCFD1-208ENST00000553278 GINS1Q14691 196 aa4.12□□□□□ -1.75
SCFD1-208ENST00000553278 RGNQ15493 299 aa4.12□□□□□ -1.75
SCFD1-208ENST00000553278 LPAL2Q16609 132 aa4.12□□□□□ -1.75
SCFD1-208ENST00000553278 CCDC14Q49A88 953 aa4.12□□□□□ -1.75
SCFD1-208ENST00000553278 TFDP3Q5H9I0 405 aa4.12□□□□□ -1.75
SCFD1-208ENST00000553278 HES5Q5TA89 166 aa4.12□□□□□ -1.75
SCFD1-208ENST00000553278 PLET1Q6UQ28 207 aa4.12□□□□□ -1.75
SCFD1-208ENST00000553278 FBXW12Q6X9E4 464 aa4.12□□□□□ -1.75
SCFD1-208ENST00000553278 AHSA2Q719I0 299 aa4.12□□□□□ -1.75
SCFD1-208ENST00000553278 PLCZ1Q86YW0 608 aa4.12□□□□□ -1.75
SCFD1-208ENST00000553278 SUMF2Q8NBJ7 301 aa4.12□□□□□ -1.75
SCFD1-208ENST00000553278 OR2L8Q8NGY9 312 aa4.12□□□□□ -1.75
SCFD1-208ENST00000553278 ZFAND1Q8TCF1 268 aa4.12□□□□□ -1.75
SCFD1-208ENST00000553278 ING5Q8WYH8 240 aa4.12□□□□□ -1.75
SCFD1-208ENST00000553278 TNFRSF14Q92956 283 aa4.12□□□□□ -1.75
SCFD1-208ENST00000553278 TEAD3Q99594 435 aa4.12□□□□□ -1.75
SCFD1-208ENST00000553278 SULT4A1Q9BR01 284 aa4.12□□□□□ -1.75
SCFD1-208ENST00000553278 ZNF251Q9BRH9 671 aa4.12□□□□□ -1.75
SCFD1-208ENST00000553278 ARV1Q9H2C2 271 aa4.12□□□□□ -1.75
SCFD1-208ENST00000553278 ZNF442Q9H7R0 627 aa4.12□□□□□ -1.75
SCFD1-208ENST00000553278 RRAGDQ9NQL2 400 aaPredicted RBP4.12□□□□□ -1.75
SCFD1-208ENST00000553278 SIRT7Q9NRC8 400 aa4.12□□□□□ -1.75
SCFD1-208ENST00000553278 NKIRAS1Q9NYS0 192 aa4.12□□□□□ -1.75
SCFD1-208ENST00000553278 PSMD13Q9UNM6 376 aa4.12□□□□□ -1.75
SCFD1-208ENST00000553278 ZNF257Q9Y2Q1 563 aa4.12□□□□□ -1.75
SCFD1-208ENST00000553278 PCDH11XQ9BZA7 1347 aa4.12□□□□□ -1.75
SCFD1-208ENST00000553278 TMEM213A2RRL7 107 aa4.11□□□□□ -1.75
SCFD1-208ENST00000553278 E7ENQ6 273 aa4.11□□□□□ -1.75
SCFD1-208ENST00000553278 SGCEO43556 437 aa4.11□□□□□ -1.75
SCFD1-208ENST00000553278 RAD1O60671 282 aa4.11□□□□□ -1.75
SCFD1-208ENST00000553278 BRI3O95415 125 aa4.11□□□□□ -1.75
SCFD1-208ENST00000553278 SLC35G6P0C7Q6 338 aa4.11□□□□□ -1.75
SCFD1-208ENST00000553278 ZBTB25P24278 435 aa4.11□□□□□ -1.75
SCFD1-208ENST00000553278 GGT2P36268 569 aa4.11□□□□□ -1.75
SCFD1-208ENST00000553278 PSG5Q15238 335 aa4.11□□□□□ -1.75
SCFD1-208ENST00000553278 OR1Q1Q15612 314 aa4.11□□□□□ -1.75
SCFD1-208ENST00000553278 TMEM183BQ1AE95 376 aa4.11□□□□□ -1.75
SCFD1-208ENST00000553278 ZNF630Q2M218 657 aaPredicted RBP4.11□□□□□ -1.75
SCFD1-208ENST00000553278 PIGGQ5H8A4 983 aa4.11□□□□□ -1.75
SCFD1-208ENST00000553278 SLC25A30Q5SVS4 291 aa4.11□□□□□ -1.75
SCFD1-208ENST00000553278 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.11□□□□□ -1.75
SCFD1-208ENST00000553278 IL34Q6ZMJ4 242 aa4.11□□□□□ -1.75
SCFD1-208ENST00000553278 TMEM183AQ8IXX5 376 aa4.11□□□□□ -1.75
SCFD1-208ENST00000553278 DCAF4L2Q8NA75 395 aa4.11□□□□□ -1.75
SCFD1-208ENST00000553278 ZNF738Q8NE65 137 aa4.11□□□□□ -1.75
SCFD1-208ENST00000553278 RDH12Q96NR8 316 aa4.11□□□□□ -1.75
SCFD1-208ENST00000553278 ACOT13Q9NPJ3 140 aa4.11□□□□□ -1.75
SCFD1-208ENST00000553278 CYB5R1Q9UHQ9 305 aa4.11□□□□□ -1.75
SCFD1-208ENST00000553278 PSG8Q9UQ74 426 aa4.11□□□□□ -1.75
SCFD1-208ENST00000553278 PUS1Q9Y606 427 aaKnown RBP eCLIP4.11□□□□□ -1.75
SCFD1-208ENST00000553278 TRAV8-4A0A0B4J246 113 aa4.1□□□□□ -1.75
SCFD1-208ENST00000553278 PLAC8L1A1L4L8 177 aa4.1□□□□□ -1.75
SCFD1-208ENST00000553278 GOLGA8IPA6NC78 632 aa4.1□□□□□ -1.75
SCFD1-208ENST00000553278 SMLR1H3BR10 107 aa4.1□□□□□ -1.75
SCFD1-208ENST00000553278 M0R1B8 84 aa4.1□□□□□ -1.75
SCFD1-208ENST00000553278 ITGB1BP1O14713 200 aa4.1□□□□□ -1.75
SCFD1-208ENST00000553278 SEMA3DO95025 777 aa4.1□□□□□ -1.75
SCFD1-208ENST00000553278 P01737 135 aa4.1□□□□□ -1.75
SCFD1-208ENST00000553278 HLA-DPB1P04440 258 aa4.1□□□□□ -1.75
SCFD1-208ENST00000553278 RCC1P18754 421 aaPredicted RBP4.1□□□□□ -1.75
SCFD1-208ENST00000553278 OMGP23515 440 aa4.1□□□□□ -1.75
SCFD1-208ENST00000553278 TEAD1P28347 426 aa4.1□□□□□ -1.75
SCFD1-208ENST00000553278 GALR1P47211 349 aa4.1□□□□□ -1.75
SCFD1-208ENST00000553278 NMUP48645 174 aa4.1□□□□□ -1.75
SCFD1-208ENST00000553278 XKP51811 444 aa4.1□□□□□ -1.75
SCFD1-208ENST00000553278 NDUFA8P51970 172 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms