RNA–Protein interactions for RNA: ENST00000552338.5

LIMA1-211, Transcript of LIM domain and actin binding 1, humanhuman

TSL 4

Gene LIMA1, Length 555 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-211ENST00000552338 RPS23P62266 143 aaKnown RBP8.24□□□□□ -1.09
LIMA1-211ENST00000552338 FAM3AP98173 230 aa8.24□□□□□ -1.09
LIMA1-211ENST00000552338 GK2Q14410 553 aaPredicted RBP8.24□□□□□ -1.09
LIMA1-211ENST00000552338 TIMM50Q3ZCQ8 353 aa8.24□□□□□ -1.09
LIMA1-211ENST00000552338 Q499Y3 187 aa8.24□□□□□ -1.09
LIMA1-211ENST00000552338 BCL2L15Q5TBC7 163 aa8.24□□□□□ -1.09
LIMA1-211ENST00000552338 LIPKQ5VXJ0 399 aa8.24□□□□□ -1.09
LIMA1-211ENST00000552338 TMEM42Q69YG0 159 aa8.24□□□□□ -1.09
LIMA1-211ENST00000552338 ZNF529Q6P280 563 aa8.24□□□□□ -1.09
LIMA1-211ENST00000552338 PAMR1Q6UXH9 720 aa8.24□□□□□ -1.09
LIMA1-211ENST00000552338 TMEM91Q6ZNR0 172 aa8.24□□□□□ -1.09
LIMA1-211ENST00000552338 RFPL4BQ6ZWI9 263 aa8.24□□□□□ -1.09
LIMA1-211ENST00000552338 FAM57BQ71RH2 274 aa8.24□□□□□ -1.09
LIMA1-211ENST00000552338 GPR141Q7Z602 305 aa8.24□□□□□ -1.09
LIMA1-211ENST00000552338 ZNF420Q8TAQ5 688 aaPredicted RBP8.24□□□□□ -1.09
LIMA1-211ENST00000552338 ABHD4Q8TB40 342 aa8.24□□□□□ -1.09
LIMA1-211ENST00000552338 GPR148Q8TDV2 347 aa8.24□□□□□ -1.09
LIMA1-211ENST00000552338 PGAM5Q96HS1 289 aa8.24□□□□□ -1.09
LIMA1-211ENST00000552338 PDCD1LG2Q9BQ51 273 aa8.24□□□□□ -1.09
LIMA1-211ENST00000552338 C1QTNF6Q9BXI9 259 aa8.24□□□□□ -1.09
LIMA1-211ENST00000552338 ZNF275Q9NSD4 429 aaPredicted RBP8.24□□□□□ -1.09
LIMA1-211ENST00000552338 CRIM1Q9NZV1 1036 aa8.24□□□□□ -1.09
LIMA1-211ENST00000552338 STUB1Q9UNE7 303 aa8.24□□□□□ -1.09
LIMA1-211ENST00000552338 UBR5O95071 2799 aaPredicted RBP8.24□□□□□ -1.09
LIMA1-211ENST00000552338 ABCA4P78363 2273 aa8.23□□□□□ -1.09
LIMA1-211ENST00000552338 ARFGEF3Q5TH69 2177 aa8.23□□□□□ -1.09
LIMA1-211ENST00000552338 SMIM31A0A1B0GVY4 71 aa8.23□□□□□ -1.09
LIMA1-211ENST00000552338 C5orf63A6NC05 138 aa8.23□□□□□ -1.09
LIMA1-211ENST00000552338 IQCF6A8MYZ5 107 aa8.23□□□□□ -1.09
LIMA1-211ENST00000552338 CASKO14936 926 aa8.23□□□□□ -1.09
LIMA1-211ENST00000552338 GABARAPO95166 117 aa8.23□□□□□ -1.09
LIMA1-211ENST00000552338 IGHV3-13P01766 116 aa8.23□□□□□ -1.09
LIMA1-211ENST00000552338 UCHL1P09936 223 aa8.23□□□□□ -1.09
LIMA1-211ENST00000552338 SLC2A1P11166 492 aa8.23□□□□□ -1.09
LIMA1-211ENST00000552338 IGFBP3P17936 291 aaPredicted RBP8.23□□□□□ -1.09
LIMA1-211ENST00000552338 FSTP19883 344 aa8.23□□□□□ -1.09
LIMA1-211ENST00000552338 MAPK3P27361 379 aaPredicted RBP8.23□□□□□ -1.09
LIMA1-211ENST00000552338 FABP5Q01469 135 aa8.23□□□□□ -1.09
LIMA1-211ENST00000552338 ZNF92Q03936 586 aa8.23□□□□□ -1.09
LIMA1-211ENST00000552338 BSPH1Q075Z2 132 aa8.23□□□□□ -1.09
LIMA1-211ENST00000552338 MALLQ13021 153 aa8.23□□□□□ -1.09
LIMA1-211ENST00000552338 ZNF718Q3SXZ3 478 aa8.23□□□□□ -1.09
LIMA1-211ENST00000552338 ACSM3Q53FZ2 586 aa8.23□□□□□ -1.09
LIMA1-211ENST00000552338 GLYATL3Q5SZD4 288 aa8.23□□□□□ -1.09
LIMA1-211ENST00000552338 SLC16A12Q6ZSM3 486 aa8.23□□□□□ -1.09
LIMA1-211ENST00000552338 UTS2BQ765I0 119 aa8.23□□□□□ -1.09
LIMA1-211ENST00000552338 WFDC8Q8IUA0 241 aa8.23□□□□□ -1.09
LIMA1-211ENST00000552338 ZNF676Q8N7Q3 588 aa8.23□□□□□ -1.09
LIMA1-211ENST00000552338 OR51E1Q8TCB6 317 aa8.23□□□□□ -1.09
LIMA1-211ENST00000552338 TMEM171Q8WVE6 324 aa8.23□□□□□ -1.09
LIMA1-211ENST00000552338 PLPPR2Q96GM1 343 aa8.23□□□□□ -1.09
LIMA1-211ENST00000552338 REEP6Q96HR9 211 aa8.23□□□□□ -1.09
LIMA1-211ENST00000552338 KCNS3Q9BQ31 491 aa8.23□□□□□ -1.09
LIMA1-211ENST00000552338 FUNDC2Q9BWH2 189 aa8.23□□□□□ -1.09
LIMA1-211ENST00000552338 GPR84Q9NQS5 396 aa8.23□□□□□ -1.09
LIMA1-211ENST00000552338 ENPP5Q9UJA9 477 aa8.23□□□□□ -1.09
LIMA1-211ENST00000552338 FOXJ3Q9UPW0 622 aa8.23□□□□□ -1.09
LIMA1-211ENST00000552338 USP9XQ93008 2570 aaPredicted RBP8.23□□□□□ -1.09
LIMA1-211ENST00000552338 CHD3Q12873 2000 aaKnown RBP8.23□□□□□ -1.09
LIMA1-211ENST00000552338 ICE1Q9Y2F5 2266 aa8.22□□□□□ -1.09
LIMA1-211ENST00000552338 TRAV1-2A0A0B4J238 106 aa8.22□□□□□ -1.09
LIMA1-211ENST00000552338 LOC107986453A0A1B0GWG9 222 aa8.22□□□□□ -1.09
LIMA1-211ENST00000552338 ZNF879B4DU55 563 aa8.22□□□□□ -1.09
LIMA1-211ENST00000552338 GABRPO00591 440 aa8.22□□□□□ -1.09
LIMA1-211ENST00000552338 ABCD4O14678 606 aa8.22□□□□□ -1.09
LIMA1-211ENST00000552338 PIN1P1O15428 100 aa8.22□□□□□ -1.09
LIMA1-211ENST00000552338 SYT7O43581 403 aa8.22□□□□□ -1.09
LIMA1-211ENST00000552338 ATE1O95260 518 aa8.22□□□□□ -1.09
LIMA1-211ENST00000552338 CLDN1O95832 211 aa8.22□□□□□ -1.09
LIMA1-211ENST00000552338 CST4P01036 141 aa8.22□□□□□ -1.09
LIMA1-211ENST00000552338 CD3EP07766 207 aa8.22□□□□□ -1.09
LIMA1-211ENST00000552338 SELEP16581 610 aa8.22□□□□□ -1.09
LIMA1-211ENST00000552338 CCNOP22674 350 aa8.22□□□□□ -1.09
LIMA1-211ENST00000552338 CFPP27918 469 aa8.22□□□□□ -1.09
LIMA1-211ENST00000552338 MAP2K3P46734 347 aa8.22□□□□□ -1.09
LIMA1-211ENST00000552338 GSK3AP49840 483 aa8.22□□□□□ -1.09
LIMA1-211ENST00000552338 RPS25P62851 125 aaKnown RBP8.22□□□□□ -1.09
LIMA1-211ENST00000552338 SLC3A1Q07837 685 aa8.22□□□□□ -1.09
LIMA1-211ENST00000552338 EFNB3Q15768 340 aa8.22□□□□□ -1.09
LIMA1-211ENST00000552338 CTF1Q16619 201 aa8.22□□□□□ -1.09
LIMA1-211ENST00000552338 ZMAT1Q5H9K5 638 aa8.22□□□□□ -1.09
LIMA1-211ENST00000552338 RGS7BPQ6MZT1 257 aaPredicted RBP8.22□□□□□ -1.09
LIMA1-211ENST00000552338 SATL1Q86VE3 508 aa8.22□□□□□ -1.09
LIMA1-211ENST00000552338 CDH26Q8IXH8 852 aa8.22□□□□□ -1.09
LIMA1-211ENST00000552338 RDH10Q8IZV5 341 aa8.22□□□□□ -1.09
LIMA1-211ENST00000552338 ZFP41Q8N8Y5 198 aa8.22□□□□□ -1.09
LIMA1-211ENST00000552338 CSNK2A3Q8NEV1 391 aa8.22□□□□□ -1.09
LIMA1-211ENST00000552338 OR51A4Q8NGJ6 313 aa8.22□□□□□ -1.09
LIMA1-211ENST00000552338 OR1J1Q8NGS3 322 aa8.22□□□□□ -1.09
LIMA1-211ENST00000552338 OR10AC1Q8NH08 325 aa8.22□□□□□ -1.09
LIMA1-211ENST00000552338 LILRB1Q8NHL6 650 aaPredicted RBP8.22□□□□□ -1.09
LIMA1-211ENST00000552338 SLC25A40Q8TBP6 338 aa8.22□□□□□ -1.09
LIMA1-211ENST00000552338 KLF14Q8TD94 323 aaPredicted RBP8.22□□□□□ -1.09
LIMA1-211ENST00000552338 PP6455Q8WZ26 134 aa8.22□□□□□ -1.09
LIMA1-211ENST00000552338 PIGTQ969N2 578 aa8.22□□□□□ -1.09
LIMA1-211ENST00000552338 ZC3HAV1LQ96H79 300 aaKnown RBP8.22□□□□□ -1.09
LIMA1-211ENST00000552338 PSMG3-AS1Q96PY0 264 aa8.22□□□□□ -1.09
LIMA1-211ENST00000552338 DERL3Q96Q80 235 aa8.22□□□□□ -1.09
LIMA1-211ENST00000552338 SOX7Q9BT81 388 aa8.22□□□□□ -1.09
LIMA1-211ENST00000552338 OR2J1Q9GZK6 312 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms