RNA–Protein interactions for RNA: ENST00000549249.5

DEPDC4-207, Transcript of DEP domain containing 4, humanhuman

TSL 1 (best)

Gene DEPDC4, Length 1,003 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-207ENST00000549249 Q6ZSR3 168 aa7.01□□□□□ -1.29
DEPDC4-207ENST00000549249 C22orf34Q6ZV56 151 aa7.01□□□□□ -1.29
DEPDC4-207ENST00000549249 NR2C2APQ86WQ0 139 aa7.01□□□□□ -1.29
DEPDC4-207ENST00000549249 OR51E1Q8TCB6 317 aa7.01□□□□□ -1.29
DEPDC4-207ENST00000549249 GPR148Q8TDV2 347 aa7.01□□□□□ -1.29
DEPDC4-207ENST00000549249 ASB5Q8WWX0 329 aa7.01□□□□□ -1.29
DEPDC4-207ENST00000549249 PGAM5Q96HS1 289 aa7.01□□□□□ -1.29
DEPDC4-207ENST00000549249 KCTD7Q96MP8 289 aa7.01□□□□□ -1.29
DEPDC4-207ENST00000549249 GFI1Q99684 422 aa7.01□□□□□ -1.29
DEPDC4-207ENST00000549249 KCNS3Q9BQ31 491 aa7.01□□□□□ -1.29
DEPDC4-207ENST00000549249 MED18Q9BUE0 208 aa7.01□□□□□ -1.29
DEPDC4-207ENST00000549249 C1QTNF5Q9BXJ0 243 aa7.01□□□□□ -1.29
DEPDC4-207ENST00000549249 BARHL1Q9BZE3 327 aa7.01□□□□□ -1.29
DEPDC4-207ENST00000549249 GSTK1Q9Y2Q3 226 aa7.01□□□□□ -1.29
DEPDC4-207ENST00000549249 N6AMT1Q9Y5N5 214 aa7.01□□□□□ -1.29
DEPDC4-207ENST00000549249 SLC25A15Q9Y619 301 aa7.01□□□□□ -1.29
DEPDC4-207ENST00000549249 NOTCH2Q04721 2471 aa7.01□□□□□ -1.29
DEPDC4-207ENST00000549249 CADP27708 2225 aa7□□□□□ -1.29
DEPDC4-207ENST00000549249 RP1L1Q8IWN7 2480 aaPredicted RBP7□□□□□ -1.29
DEPDC4-207ENST00000549249 TRAV8-7A0A075B6U6 113 aa7□□□□□ -1.29
DEPDC4-207ENST00000549249 A0A0G2JK05 382 aa7□□□□□ -1.29
DEPDC4-207ENST00000549249 A0A0U1RQV5 110 aa7□□□□□ -1.29
DEPDC4-207ENST00000549249 IQCMA0A1B0GVH7 501 aa7□□□□□ -1.29
DEPDC4-207ENST00000549249 C5orf49A4QMS7 147 aa7□□□□□ -1.29
DEPDC4-207ENST00000549249 ANKRD61A6NGH8 418 aa7□□□□□ -1.29
DEPDC4-207ENST00000549249 TBX1O43435 398 aa7□□□□□ -1.29
DEPDC4-207ENST00000549249 IL1AP01583 271 aa7□□□□□ -1.29
DEPDC4-207ENST00000549249 IGKV3-15P01624 115 aa7□□□□□ -1.29
DEPDC4-207ENST00000549249 IGLV1-44P01699 117 aa7□□□□□ -1.29
DEPDC4-207ENST00000549249 APOC1P02654 83 aa7□□□□□ -1.29
DEPDC4-207ENST00000549249 SERPINA5P05154 406 aa7□□□□□ -1.29
DEPDC4-207ENST00000549249 OCM2P0CE71 109 aa7□□□□□ -1.29
DEPDC4-207ENST00000549249 CBR1P16152 277 aa7□□□□□ -1.29
DEPDC4-207ENST00000549249 GNLYP22749 145 aa7□□□□□ -1.29
DEPDC4-207ENST00000549249 IL32P24001 234 aa7□□□□□ -1.29
DEPDC4-207ENST00000549249 STOMP27105 288 aa7□□□□□ -1.29
DEPDC4-207ENST00000549249 MTNR1BP49286 362 aa7□□□□□ -1.29
DEPDC4-207ENST00000549249 IDH3GP51553 393 aaPredicted RBP7□□□□□ -1.29
DEPDC4-207ENST00000549249 CAV3P56539 151 aa7□□□□□ -1.29
DEPDC4-207ENST00000549249 OR10A3P58181 314 aa7□□□□□ -1.29
DEPDC4-207ENST00000549249 PLP2Q04941 152 aa7□□□□□ -1.29
DEPDC4-207ENST00000549249 MXD1Q05195 221 aa7□□□□□ -1.29
DEPDC4-207ENST00000549249 SRSF1Q07955 248 aaKnown RBP eCLIP7□□□□□ -1.29
DEPDC4-207ENST00000549249 TNK1Q13470 666 aa7□□□□□ -1.29
DEPDC4-207ENST00000549249 CDSNQ15517 529 aa7□□□□□ -1.29
DEPDC4-207ENST00000549249 IGFBP7Q16270 282 aa7□□□□□ -1.29
DEPDC4-207ENST00000549249 GLYATL3Q5SZD4 288 aa7□□□□□ -1.29
DEPDC4-207ENST00000549249 TMEM244Q5VVB8 128 aa7□□□□□ -1.29
DEPDC4-207ENST00000549249 SEZ6L2Q6UXD5 910 aa7□□□□□ -1.29
DEPDC4-207ENST00000549249 PAMR1Q6UXH9 720 aa7□□□□□ -1.29
DEPDC4-207ENST00000549249 FJX1Q86VR8 437 aa7□□□□□ -1.29
DEPDC4-207ENST00000549249 CCDC36Q8IYA8 594 aa7□□□□□ -1.29
DEPDC4-207ENST00000549249 OR1J2Q8NGS2 313 aa7□□□□□ -1.29
DEPDC4-207ENST00000549249 OR14K1Q8NGZ2 314 aa7□□□□□ -1.29
DEPDC4-207ENST00000549249 OR2AE1Q8NHA4 323 aa7□□□□□ -1.29
DEPDC4-207ENST00000549249 TSEN15Q8WW01 171 aaKnown RBP7□□□□□ -1.29
DEPDC4-207ENST00000549249 PHYHIPQ92561 330 aa7□□□□□ -1.29
DEPDC4-207ENST00000549249 TMEM106AQ96A25 262 aa7□□□□□ -1.29
DEPDC4-207ENST00000549249 S100PBPQ96BU1 408 aa7□□□□□ -1.29
DEPDC4-207ENST00000549249 ADAT3Q96EY9 351 aaPredicted RBP7□□□□□ -1.29
DEPDC4-207ENST00000549249 CCDC120Q96HB5 630 aa7□□□□□ -1.29
DEPDC4-207ENST00000549249 DACH2Q96NX9 599 aa7□□□□□ -1.29
DEPDC4-207ENST00000549249 C1QTNF6Q9BXI9 259 aa7□□□□□ -1.29
DEPDC4-207ENST00000549249 SLIRPQ9GZT3 109 aaKnown RBP7□□□□□ -1.29
DEPDC4-207ENST00000549249 POFUT1Q9H488 388 aa7□□□□□ -1.29
DEPDC4-207ENST00000549249 OBP2BQ9NPH6 170 aa7□□□□□ -1.29
DEPDC4-207ENST00000549249 GPR84Q9NQS5 396 aa7□□□□□ -1.29
DEPDC4-207ENST00000549249 SNTG1Q9NSN8 517 aa7□□□□□ -1.29
DEPDC4-207ENST00000549249 NPAP1Q9NZP6 1156 aa7□□□□□ -1.29
DEPDC4-207ENST00000549249 CCDC59Q9P031 241 aaKnown RBP7□□□□□ -1.29
DEPDC4-207ENST00000549249 CRNNQ9UBG3 495 aaPredicted RBP7□□□□□ -1.29
DEPDC4-207ENST00000549249 HHLA2Q9UM44 414 aa7□□□□□ -1.29
DEPDC4-207ENST00000549249 AMDHD2Q9Y303 409 aa7□□□□□ -1.29
DEPDC4-207ENST00000549249 PTPN13Q12923 2485 aa7□□□□□ -1.29
DEPDC4-207ENST00000549249 TRAV1-2A0A0B4J238 106 aa6.99□□□□□ -1.29
DEPDC4-207ENST00000549249 IGHV1-18A0A0C4DH31 117 aa6.99□□□□□ -1.29
DEPDC4-207ENST00000549249 hCG_38984A0A1B0GV85 526 aa6.99□□□□□ -1.29
DEPDC4-207ENST00000549249 A0A1B0GVI7 797 aa6.99□□□□□ -1.29
DEPDC4-207ENST00000549249 J3QW42 95 aa6.99□□□□□ -1.29
DEPDC4-207ENST00000549249 SYT7O43581 403 aa6.99□□□□□ -1.29
DEPDC4-207ENST00000549249 NCR1O76036 304 aa6.99□□□□□ -1.29
DEPDC4-207ENST00000549249 NGFP01138 241 aa6.99□□□□□ -1.29
DEPDC4-207ENST00000549249 LCATP04180 440 aa6.99□□□□□ -1.29
DEPDC4-207ENST00000549249 CECR9P0C854 216 aa6.99□□□□□ -1.29
DEPDC4-207ENST00000549249 IGFBP3P17936 291 aaPredicted RBP6.99□□□□□ -1.29
DEPDC4-207ENST00000549249 ADRA2CP18825 462 aa6.99□□□□□ -1.29
DEPDC4-207ENST00000549249 FSTP19883 344 aa6.99□□□□□ -1.29
DEPDC4-207ENST00000549249 CCNOP22674 350 aa6.99□□□□□ -1.29
DEPDC4-207ENST00000549249 MYL9P24844 172 aa6.99□□□□□ -1.29
DEPDC4-207ENST00000549249 MAPK3P27361 379 aaPredicted RBP6.99□□□□□ -1.29
DEPDC4-207ENST00000549249 HOXC12P31275 282 aa6.99□□□□□ -1.29
DEPDC4-207ENST00000549249 APLNRP35414 380 aa6.99□□□□□ -1.29
DEPDC4-207ENST00000549249 GATA4P43694 442 aa6.99□□□□□ -1.29
DEPDC4-207ENST00000549249 ZNF92Q03936 586 aa6.99□□□□□ -1.29
DEPDC4-207ENST00000549249 HNRNPA0Q13151 305 aaKnown RBP6.99□□□□□ -1.29
DEPDC4-207ENST00000549249 TAB1Q15750 504 aa6.99□□□□□ -1.29
DEPDC4-207ENST00000549249 GFOD2Q3B7J2 385 aa6.99□□□□□ -1.29
DEPDC4-207ENST00000549249 HSD17B12Q53GQ0 312 aa6.99□□□□□ -1.29
DEPDC4-207ENST00000549249 CEP78Q5JTW2 689 aa6.99□□□□□ -1.29
DEPDC4-207ENST00000549249 TIMM23BQ5SRD1 257 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms