RNA–Protein interactions for RNA: ENST00000538827.5

CD4-208, Transcript of CD4 molecule, humanhuman

TSL 1 (best)

Gene CD4, Length 985 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-208ENST00000538827 CRNNQ9UBG3 495 aaPredicted RBP12.24□□□□□ -0.45
CD4-208ENST00000538827 EIF3KQ9UBQ5 218 aaKnown RBP12.24□□□□□ -0.45
CD4-208ENST00000538827 CELSR1Q9NYQ6 3014 aa12.24□□□□□ -0.45
CD4-208ENST00000538827 PDZD2O15018 2839 aa12.24□□□□□ -0.45
CD4-208ENST00000538827 TRDV1A0A1B0GX56 115 aa12.23□□□□□ -0.45
CD4-208ENST00000538827 A0A1W2PPK0 400 aa12.23□□□□□ -0.45
CD4-208ENST00000538827 ZNF879B4DU55 563 aa12.23□□□□□ -0.45
CD4-208ENST00000538827 XRCC2O43543 280 aa12.23□□□□□ -0.45
CD4-208ENST00000538827 ATE1O95260 518 aa12.23□□□□□ -0.45
CD4-208ENST00000538827 IGLV1-44P01699 117 aa12.23□□□□□ -0.45
CD4-208ENST00000538827 PPP3CBP16298 524 aa12.23□□□□□ -0.45
CD4-208ENST00000538827 MYL9P24844 172 aa12.23□□□□□ -0.45
CD4-208ENST00000538827 WNT5AP41221 380 aa12.23□□□□□ -0.45
CD4-208ENST00000538827 SERPINB10P48595 397 aa12.23□□□□□ -0.45
CD4-208ENST00000538827 Q499Y3 187 aa12.23□□□□□ -0.45
CD4-208ENST00000538827 FAM27D1Q5T7N8 215 aa12.23□□□□□ -0.45
CD4-208ENST00000538827 MRPL21Q7Z2W9 205 aaKnown RBP12.23□□□□□ -0.45
CD4-208ENST00000538827 APOBEC3DQ96AK3 386 aaPredicted RBP12.23□□□□□ -0.45
CD4-208ENST00000538827 C1QTNF5Q9BXJ0 243 aa12.23□□□□□ -0.45
CD4-208ENST00000538827 PLEKHA1Q9HB21 404 aa12.23□□□□□ -0.45
CD4-208ENST00000538827 GSTK1Q9Y2Q3 226 aa12.23□□□□□ -0.45
CD4-208ENST00000538827 HCFC1P51610 2035 aa12.23□□□□□ -0.45
CD4-208ENST00000538827 HIVEP1P15822 2718 aa12.23□□□□□ -0.45
CD4-208ENST00000538827 MTORP42345 2549 aa12.22□□□□□ -0.45
CD4-208ENST00000538827 PRR14LQ5THK1 2151 aa12.22□□□□□ -0.45
CD4-208ENST00000538827 IGHV2OR16-5A0A0B4J2B6 119 aa12.22□□□□□ -0.45
CD4-208ENST00000538827 TRBV5-5A0A0J9YX44 114 aa12.22□□□□□ -0.45
CD4-208ENST00000538827 LMX1BO60663 402 aa12.22□□□□□ -0.45
CD4-208ENST00000538827 SMPD2O60906 423 aa12.22□□□□□ -0.45
CD4-208ENST00000538827 THBDP07204 575 aa12.22□□□□□ -0.45
CD4-208ENST00000538827 ZNF20P17024 532 aa12.22□□□□□ -0.45
CD4-208ENST00000538827 PAX7P23759 505 aa12.22□□□□□ -0.45
CD4-208ENST00000538827 MAPK3P27361 379 aaPredicted RBP12.22□□□□□ -0.45
CD4-208ENST00000538827 CALRP27797 417 aaKnown RBP12.22□□□□□ -0.45
CD4-208ENST00000538827 PRSS12P56730 875 aa12.22□□□□□ -0.45
CD4-208ENST00000538827 RPS11P62280 158 aaKnown RBP eCLIP12.22□□□□□ -0.45
CD4-208ENST00000538827 NAAAQ02083 359 aa12.22□□□□□ -0.45
CD4-208ENST00000538827 MALLQ13021 153 aa12.22□□□□□ -0.45
CD4-208ENST00000538827 CTF1Q16619 201 aa12.22□□□□□ -0.45
CD4-208ENST00000538827 ZMAT1Q5H9K5 638 aa12.22□□□□□ -0.45
CD4-208ENST00000538827 SPATA46Q5T0L3 261 aa12.22□□□□□ -0.45
CD4-208ENST00000538827 XKRXQ6PP77 449 aa12.22□□□□□ -0.45
CD4-208ENST00000538827 CD200R1LQ6Q8B3 271 aa12.22□□□□□ -0.45
CD4-208ENST00000538827 TMEM91Q6ZNR0 172 aa12.22□□□□□ -0.45
CD4-208ENST00000538827 DOK3Q7L591 496 aa12.22□□□□□ -0.45
CD4-208ENST00000538827 ZNF101Q8IZC7 436 aa12.22□□□□□ -0.45
CD4-208ENST00000538827 KBTBD8Q8NFY9 601 aa12.22□□□□□ -0.45
CD4-208ENST00000538827 NDNFQ8TB73 568 aa12.22□□□□□ -0.45
CD4-208ENST00000538827 AKAP1Q92667 903 aaKnown RBP eCLIP12.22□□□□□ -0.45
CD4-208ENST00000538827 LYZL4Q96KX0 146 aa12.22□□□□□ -0.45
CD4-208ENST00000538827 DERL3Q96Q80 235 aa12.22□□□□□ -0.45
CD4-208ENST00000538827 BCL7BQ9BQE9 202 aa12.22□□□□□ -0.45
CD4-208ENST00000538827 SOX7Q9BT81 388 aa12.22□□□□□ -0.45
CD4-208ENST00000538827 POFUT1Q9H488 388 aa12.22□□□□□ -0.45
CD4-208ENST00000538827 NOX4Q9NPH5 578 aa12.22□□□□□ -0.45
CD4-208ENST00000538827 RTTNQ86VV8 2226 aa12.21□□□□□ -0.45
CD4-208ENST00000538827 A0A0U1RQV5 110 aa12.21□□□□□ -0.45
CD4-208ENST00000538827 SMIM30A4D0T7 59 aa12.21□□□□□ -0.45
CD4-208ENST00000538827 SLC22A1O15245 554 aa12.21□□□□□ -0.45
CD4-208ENST00000538827 GATBO75879 557 aaKnown RBP12.21□□□□□ -0.45
CD4-208ENST00000538827 NGFP01138 241 aa12.21□□□□□ -0.45
CD4-208ENST00000538827 ISG15P05161 165 aa12.21□□□□□ -0.45
CD4-208ENST00000538827 CD2P06729 351 aa12.21□□□□□ -0.45
CD4-208ENST00000538827 AGAP20933 346 aa12.21□□□□□ -0.45
CD4-208ENST00000538827 CALCRP30988 508 aa12.21□□□□□ -0.45
CD4-208ENST00000538827 PPP1CBP62140 327 aa12.21□□□□□ -0.45
CD4-208ENST00000538827 SORDQ00796 357 aa12.21□□□□□ -0.45
CD4-208ENST00000538827 SPOCK1Q08629 439 aa12.21□□□□□ -0.45
CD4-208ENST00000538827 SPCS2Q15005 226 aa12.21□□□□□ -0.45
CD4-208ENST00000538827 HSD17B12Q53GQ0 312 aa12.21□□□□□ -0.45
CD4-208ENST00000538827 C1QTNF12Q5T7M4 302 aa12.21□□□□□ -0.45
CD4-208ENST00000538827 PAMR1Q6UXH9 720 aa12.21□□□□□ -0.45
CD4-208ENST00000538827 GDPGP1Q6ZNW5 385 aa12.21□□□□□ -0.45
CD4-208ENST00000538827 C22orf34Q6ZV56 151 aa12.21□□□□□ -0.45
CD4-208ENST00000538827 FAM169BQ8N8A8 192 aa12.21□□□□□ -0.45
CD4-208ENST00000538827 OR1J1Q8NGS3 322 aa12.21□□□□□ -0.45
CD4-208ENST00000538827 LINC01560Q8TB33 94 aa12.21□□□□□ -0.45
CD4-208ENST00000538827 THRSPQ92748 146 aa12.21□□□□□ -0.45
CD4-208ENST00000538827 ORAI1Q96D31 301 aa12.21□□□□□ -0.45
CD4-208ENST00000538827 DGCR14Q96DF8 476 aaKnown RBP12.21□□□□□ -0.45
CD4-208ENST00000538827 RADILQ96JH8 1075 aa12.21□□□□□ -0.45
CD4-208ENST00000538827 KCTD7Q96MP8 289 aa12.21□□□□□ -0.45
CD4-208ENST00000538827 WFIKKN1Q96NZ8 548 aa12.21□□□□□ -0.45
CD4-208ENST00000538827 NDRG3Q9UGV2 375 aa12.21□□□□□ -0.45
CD4-208ENST00000538827 HEATR1Q9H583 2144 aaKnown RBP12.2□□□□□ -0.46
CD4-208ENST00000538827 A0A1B0GTI1 187 aa12.2□□□□□ -0.46
CD4-208ENST00000538827 ATP6V1G2-DDX39BF2Z307 99 aa12.2□□□□□ -0.46
CD4-208ENST00000538827 MTRF1O75570 445 aaKnown RBP12.2□□□□□ -0.46
CD4-208ENST00000538827 ARL6IP5O75915 188 aa12.2□□□□□ -0.46
CD4-208ENST00000538827 CRYAAP02489 173 aa12.2□□□□□ -0.46
CD4-208ENST00000538827 ZNF12P17014 697 aa12.2□□□□□ -0.46
CD4-208ENST00000538827 CCL1P22362 96 aa12.2□□□□□ -0.46
CD4-208ENST00000538827 GALP22466 123 aa12.2□□□□□ -0.46
CD4-208ENST00000538827 GNALP38405 381 aa12.2□□□□□ -0.46
CD4-208ENST00000538827 ERVS71-1P61550 626 aa12.2□□□□□ -0.46
CD4-208ENST00000538827 ZNF92Q03936 586 aa12.2□□□□□ -0.46
CD4-208ENST00000538827 MXD1Q05195 221 aa12.2□□□□□ -0.46
CD4-208ENST00000538827 SNTB2Q13425 540 aaKnown RBP12.2□□□□□ -0.46
CD4-208ENST00000538827 C3orf36Q3SXR2 165 aa12.2□□□□□ -0.46
CD4-208ENST00000538827 SEZ6L2Q6UXD5 910 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms