RNA–Protein interactions for RNA: ENST00000512068.1

HTT-209, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 401 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-209ENST00000512068 PHF21AQ96BD5 680 aa7.06□□□□□ -1.28
HTT-209ENST00000512068 FOXRED1Q96CU9 486 aaPredicted RBP7.06□□□□□ -1.28
HTT-209ENST00000512068 CPNE2Q96FN4 548 aaPredicted RBP7.06□□□□□ -1.28
HTT-209ENST00000512068 GPR84Q9NQS5 396 aa7.06□□□□□ -1.28
HTT-209ENST00000512068 TAS2R4Q9NYW5 299 aa7.06□□□□□ -1.28
HTT-209ENST00000512068 ZNF391Q9UJN7 358 aa7.06□□□□□ -1.28
HTT-209ENST00000512068 A0A0U1RQV5 110 aa7.05□□□□□ -1.28
HTT-209ENST00000512068 SHISA3A0PJX4 238 aa7.05□□□□□ -1.28
HTT-209ENST00000512068 MBD3L4A6NDZ8 208 aaPredicted RBP7.05□□□□□ -1.28
HTT-209ENST00000512068 MBD3L3A6NE82 208 aaPredicted RBP7.05□□□□□ -1.28
HTT-209ENST00000512068 MBD3L5A6NJ08 208 aaPredicted RBP7.05□□□□□ -1.28
HTT-209ENST00000512068 IFITM5A6NNB3 132 aa7.05□□□□□ -1.28
HTT-209ENST00000512068 PIN1P1O15428 100 aa7.05□□□□□ -1.28
HTT-209ENST00000512068 ZNHIT1O43257 154 aa7.05□□□□□ -1.28
HTT-209ENST00000512068 XRCC2O43543 280 aa7.05□□□□□ -1.28
HTT-209ENST00000512068 HPGDSO60760 199 aa7.05□□□□□ -1.28
HTT-209ENST00000512068 RAD51DO75771 328 aa7.05□□□□□ -1.28
HTT-209ENST00000512068 INHBBP09529 407 aa7.05□□□□□ -1.28
HTT-209ENST00000512068 PATE4P0C8F1 98 aa7.05□□□□□ -1.28
HTT-209ENST00000512068 CALCBP10092 127 aa7.05□□□□□ -1.28
HTT-209ENST00000512068 APEX1P27695 318 aaKnown RBP7.05□□□□□ -1.28
HTT-209ENST00000512068 BDKRB2P30411 391 aa7.05□□□□□ -1.28
HTT-209ENST00000512068 TNFSF8P32971 234 aa7.05□□□□□ -1.28
HTT-209ENST00000512068 PLA2G5P39877 138 aa7.05□□□□□ -1.28
HTT-209ENST00000512068 ETV6P41212 452 aa7.05□□□□□ -1.28
HTT-209ENST00000512068 MAGEB1P43366 347 aa7.05□□□□□ -1.28
HTT-209ENST00000512068 RAB1AP62820 205 aa7.05□□□□□ -1.28
HTT-209ENST00000512068 KLRB1Q12918 225 aa7.05□□□□□ -1.28
HTT-209ENST00000512068 RAB11BQ15907 218 aa7.05□□□□□ -1.28
HTT-209ENST00000512068 GSG1Q2KHT4 349 aa7.05□□□□□ -1.28
HTT-209ENST00000512068 TBC1D28Q2M2D7 210 aa7.05□□□□□ -1.28
HTT-209ENST00000512068 ZNF181Q2M3W8 571 aa7.05□□□□□ -1.28
HTT-209ENST00000512068 SLC25A35Q3KQZ1 300 aa7.05□□□□□ -1.28
HTT-209ENST00000512068 PYDC2Q56P42 97 aa7.05□□□□□ -1.28
HTT-209ENST00000512068 UBE2NLQ5JXB2 153 aa7.05□□□□□ -1.28
HTT-209ENST00000512068 SFRP5Q5T4F7 317 aa7.05□□□□□ -1.28
HTT-209ENST00000512068 METAP1DQ6UB28 335 aaPredicted RBP7.05□□□□□ -1.28
HTT-209ENST00000512068 BAIAP2L2Q6UXY1 529 aa7.05□□□□□ -1.28
HTT-209ENST00000512068 Q6ZT83 130 aa7.05□□□□□ -1.28
HTT-209ENST00000512068 ZNF627Q7L945 461 aa7.05□□□□□ -1.28
HTT-209ENST00000512068 OR8H2Q8N162 312 aa7.05□□□□□ -1.28
HTT-209ENST00000512068 JAGN1Q8N5M9 183 aa7.05□□□□□ -1.28
HTT-209ENST00000512068 PARP16Q8N5Y8 322 aa7.05□□□□□ -1.28
HTT-209ENST00000512068 PNLDC1Q8NA58 520 aaKnown RBP7.05□□□□□ -1.28
HTT-209ENST00000512068 OR1J2Q8NGS2 313 aa7.05□□□□□ -1.28
HTT-209ENST00000512068 MBD3L2Q8NHZ7 208 aaPredicted RBP7.05□□□□□ -1.28
HTT-209ENST00000512068 RNF141Q8WVD5 230 aa7.05□□□□□ -1.28
HTT-209ENST00000512068 SNRNP27Q8WVK2 155 aaKnown RBP7.05□□□□□ -1.28
HTT-209ENST00000512068 PPP1R14AQ96A00 147 aa7.05□□□□□ -1.28
HTT-209ENST00000512068 FGGYQ96C11 551 aa7.05□□□□□ -1.28
HTT-209ENST00000512068 ORAI1Q96D31 301 aa7.05□□□□□ -1.28
HTT-209ENST00000512068 CCDC32Q9BV29 185 aa7.05□□□□□ -1.28
HTT-209ENST00000512068 WNT5BQ9H1J7 359 aa7.05□□□□□ -1.28
HTT-209ENST00000512068 PPIL3Q9H2H8 161 aaKnown RBP7.05□□□□□ -1.28
HTT-209ENST00000512068 RGCCQ9H4X1 137 aa7.05□□□□□ -1.28
HTT-209ENST00000512068 SLC17A5Q9NRA2 495 aa7.05□□□□□ -1.28
HTT-209ENST00000512068 ABCB10Q9NRK6 738 aa7.05□□□□□ -1.28
HTT-209ENST00000512068 ZNF275Q9NSD4 429 aaPredicted RBP7.05□□□□□ -1.28
HTT-209ENST00000512068 RABL2AQ9UBK7 228 aaPredicted RBP7.05□□□□□ -1.28
HTT-209ENST00000512068 EXTL2Q9UBQ6 330 aa7.05□□□□□ -1.28
HTT-209ENST00000512068 STEAP1Q9UHE8 339 aa7.05□□□□□ -1.28
HTT-209ENST00000512068 RABL2BQ9UNT1 228 aa7.05□□□□□ -1.28
HTT-209ENST00000512068 TRAV8-7A0A075B6U6 113 aa7.04□□□□□ -1.28
HTT-209ENST00000512068 C5orf49A4QMS7 147 aa7.04□□□□□ -1.28
HTT-209ENST00000512068 DHRS3O75911 302 aa7.04□□□□□ -1.28
HTT-209ENST00000512068 LYZL6O75951 148 aa7.04□□□□□ -1.28
HTT-209ENST00000512068 HLA-HP01893 362 aa7.04□□□□□ -1.28
HTT-209ENST00000512068 HCKP08631 526 aa7.04□□□□□ -1.28
HTT-209ENST00000512068 ITGA5P08648 1049 aa7.04□□□□□ -1.28
HTT-209ENST00000512068 DBHP09172 617 aa7.04□□□□□ -1.28
HTT-209ENST00000512068 MMP7P09237 267 aaPredicted RBP7.04□□□□□ -1.28
HTT-209ENST00000512068 SLC2A2P11168 524 aaPredicted RBP7.04□□□□□ -1.28
HTT-209ENST00000512068 ATF1P18846 271 aa7.04□□□□□ -1.28
HTT-209ENST00000512068 CRYGSP22914 178 aa7.04□□□□□ -1.28
HTT-209ENST00000512068 IL32P24001 234 aa7.04□□□□□ -1.28
HTT-209ENST00000512068 PTBP1P26599 531 aaKnown RBP eCLIP7.04□□□□□ -1.28
HTT-209ENST00000512068 STOMP27105 288 aa7.04□□□□□ -1.28
HTT-209ENST00000512068 OTX1P32242 354 aaPredicted RBP7.04□□□□□ -1.28
HTT-209ENST00000512068 THBS4P35443 961 aa7.04□□□□□ -1.28
HTT-209ENST00000512068 TIMP3P35625 211 aa7.04□□□□□ -1.28
HTT-209ENST00000512068 SCAND1P57086 179 aa7.04□□□□□ -1.28
HTT-209ENST00000512068 PITPNAQ00169 270 aa7.04□□□□□ -1.28
HTT-209ENST00000512068 SPOCK1Q08629 439 aa7.04□□□□□ -1.28
HTT-209ENST00000512068 RGS21Q2M5E4 152 aa7.04□□□□□ -1.28
HTT-209ENST00000512068 TBRG1Q3YBR2 411 aa7.04□□□□□ -1.28
HTT-209ENST00000512068 HIKESHIQ53FT3 197 aa7.04□□□□□ -1.28
HTT-209ENST00000512068 TRIQKQ629K1 86 aa7.04□□□□□ -1.28
HTT-209ENST00000512068 VWA1Q6PCB0 445 aa7.04□□□□□ -1.28
HTT-209ENST00000512068 CNIH2Q6PI25 160 aa7.04□□□□□ -1.28
HTT-209ENST00000512068 XKRXQ6PP77 449 aa7.04□□□□□ -1.28
HTT-209ENST00000512068 UNQ6126/PRO20091Q6UXV3 157 aa7.04□□□□□ -1.28
HTT-209ENST00000512068 LRRTM1Q86UE6 522 aa7.04□□□□□ -1.28
HTT-209ENST00000512068 CCDC190Q86UF4 302 aa7.04□□□□□ -1.28
HTT-209ENST00000512068 MFSD4AQ8N468 514 aa7.04□□□□□ -1.28
HTT-209ENST00000512068 C1orf162Q8NEQ5 155 aaPredicted RBP7.04□□□□□ -1.28
HTT-209ENST00000512068 SEMA6DQ8NFY4 1073 aa7.04□□□□□ -1.28
HTT-209ENST00000512068 OR1M1Q8NGA1 313 aa7.04□□□□□ -1.28
HTT-209ENST00000512068 OR5L1Q8NGL2 311 aa7.04□□□□□ -1.28
HTT-209ENST00000512068 LGALS14Q8TCE9 139 aa7.04□□□□□ -1.28
HTT-209ENST00000512068 PP6455Q8WZ26 134 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms