RNA–Protein interactions for RNA: ENST00000503427.5

HMGXB3-202, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,275 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-202ENST00000503427 GPX8Q8TED1 209 aa14.57□□□□□ -0.08
HMGXB3-202ENST00000503427 ST8SIA2Q92186 375 aa14.57□□□□□ -0.08
HMGXB3-202ENST00000503427 POLDIP2Q9Y2S7 368 aa14.57□□□□□ -0.08
HMGXB3-202ENST00000503427 HDGFL3Q9Y3E1 203 aa14.57□□□□□ -0.08
HMGXB3-202ENST00000503427 TNS1Q9HBL0 1735 aaKnown RBP14.57□□□□□ -0.08
HMGXB3-202ENST00000503427 IGHV1OR21-1A0A087WYE8 117 aa14.57□□□□□ -0.08
HMGXB3-202ENST00000503427 IGHV3-9P01782 118 aa14.57□□□□□ -0.08
HMGXB3-202ENST00000503427 GRPP07492 148 aa14.57□□□□□ -0.08
HMGXB3-202ENST00000503427 LIMS3P0CW19 117 aa14.57□□□□□ -0.08
HMGXB3-202ENST00000503427 LIMS4P0CW20 117 aa14.57□□□□□ -0.08
HMGXB3-202ENST00000503427 OR5H8P0DN80 308 aa14.57□□□□□ -0.08
HMGXB3-202ENST00000503427 SELEP16581 610 aa14.57□□□□□ -0.08
HMGXB3-202ENST00000503427 H2BFWTQ7Z2G1 175 aa14.57□□□□□ -0.08
HMGXB3-202ENST00000503427 SLC35G3Q8N808 338 aa14.57□□□□□ -0.08
HMGXB3-202ENST00000503427 PPP1R1CQ8WVI7 109 aa14.57□□□□□ -0.08
HMGXB3-202ENST00000503427 WDR89Q96FK6 387 aaPredicted RBP14.57□□□□□ -0.08
HMGXB3-202ENST00000503427 EXOGQ9Y2C4 368 aaKnown RBP14.57□□□□□ -0.08
HMGXB3-202ENST00000503427 RAG2P55895 527 aa14.57□□□□□ -0.08
HMGXB3-202ENST00000503427 EIF3IQ13347 325 aaKnown RBP14.57□□□□□ -0.08
HMGXB3-202ENST00000503427 TAF9Q16594 264 aa14.57□□□□□ -0.08
HMGXB3-202ENST00000503427 TCTN1Q2MV58 587 aa14.57□□□□□ -0.08
HMGXB3-202ENST00000503427 SPACA9Q96E40 222 aaPredicted RBP14.57□□□□□ -0.08
HMGXB3-202ENST00000503427 GDF2Q9UK05 429 aaPredicted RBP14.57□□□□□ -0.08
HMGXB3-202ENST00000503427 UMAD1C9J7I0 102 aa14.57□□□□□ -0.08
HMGXB3-202ENST00000503427 PRKNO60260 465 aaPredicted RBP14.57□□□□□ -0.08
HMGXB3-202ENST00000503427 ATF1P18846 271 aa14.57□□□□□ -0.08
HMGXB3-202ENST00000503427 AANATQ16613 207 aa14.57□□□□□ -0.08
HMGXB3-202ENST00000503427 PNLIPRP3Q17RR3 467 aa14.57□□□□□ -0.08
HMGXB3-202ENST00000503427 C12orf49Q9H741 205 aa14.57□□□□□ -0.08
HMGXB3-202ENST00000503427 BCL2L11O43521 198 aa14.57□□□□□ -0.08
HMGXB3-202ENST00000503427 ZNF354AO60765 605 aaPredicted RBP14.57□□□□□ -0.08
HMGXB3-202ENST00000503427 SLC17A5Q9NRA2 495 aa14.57□□□□□ -0.08
HMGXB3-202ENST00000503427 CBR3O75828 277 aa14.56□□□□□ -0.08
HMGXB3-202ENST00000503427 EIF4EBP2Q13542 120 aaPredicted RBP14.56□□□□□ -0.08
HMGXB3-202ENST00000503427 SARAFQ96BY9 339 aa14.56□□□□□ -0.08
HMGXB3-202ENST00000503427 DOCK5Q9H7D0 1870 aa14.56□□□□□ -0.08
HMGXB3-202ENST00000503427 OR2C1O95371 312 aa14.56□□□□□ -0.08
HMGXB3-202ENST00000503427 PI3P19957 117 aa14.56□□□□□ -0.08
HMGXB3-202ENST00000503427 ACKR3P25106 362 aa14.56□□□□□ -0.08
HMGXB3-202ENST00000503427 PCBP3P57721 371 aaKnown RBP14.56□□□□□ -0.08
HMGXB3-202ENST00000503427 OR52B4Q8NGK2 314 aa14.56□□□□□ -0.08
HMGXB3-202ENST00000503427 NUDT9Q9BW91 350 aa14.56□□□□□ -0.08
HMGXB3-202ENST00000503427 RNF150Q9ULK6 438 aa14.56□□□□□ -0.08
HMGXB3-202ENST00000503427 URGCP-MRPS24S4R325 110 aa14.56□□□□□ -0.08
HMGXB3-202ENST00000503427 EFSO43281 561 aa14.56□□□□□ -0.08
HMGXB3-202ENST00000503427 GLI4P10075 376 aa14.56□□□□□ -0.08
HMGXB3-202ENST00000503427 OPRM1P35372 400 aa14.56□□□□□ -0.08
HMGXB3-202ENST00000503427 CLLU1Q5K131 121 aa14.56□□□□□ -0.08
HMGXB3-202ENST00000503427 C17orf107Q6ZR85 190 aa14.56□□□□□ -0.08
HMGXB3-202ENST00000503427 ABI3BPQ7Z7G0 1075 aa14.56□□□□□ -0.08
HMGXB3-202ENST00000503427 FAM234AQ9H0X4 552 aa14.56□□□□□ -0.08
HMGXB3-202ENST00000503427 LANCL2Q9NS86 450 aa14.56□□□□□ -0.08
HMGXB3-202ENST00000503427 GAB2Q9UQC2 676 aa14.56□□□□□ -0.08
HMGXB3-202ENST00000503427 ANKUB1A6NFN9 424 aa14.56□□□□□ -0.08
HMGXB3-202ENST00000503427 PYCARD-AS1I3L0S3 204 aa14.56□□□□□ -0.08
HMGXB3-202ENST00000503427 FAM199XQ6PEV8 388 aaPredicted RBP14.56□□□□□ -0.08
HMGXB3-202ENST00000503427 MAMSTRQ6ZN01 415 aa14.56□□□□□ -0.08
HMGXB3-202ENST00000503427 BAGE3Q86Y29 109 aa14.56□□□□□ -0.08
HMGXB3-202ENST00000503427 BAGE2Q86Y30 109 aa14.56□□□□□ -0.08
HMGXB3-202ENST00000503427 C20orf202A1L168 122 aa14.55□□□□□ -0.08
HMGXB3-202ENST00000503427 ARPC3O15145 178 aa14.55□□□□□ -0.08
HMGXB3-202ENST00000503427 ARR3P36575 388 aa14.55□□□□□ -0.08
HMGXB3-202ENST00000503427 ELLP55199 621 aaPredicted RBP14.55□□□□□ -0.08
HMGXB3-202ENST00000503427 TFF2Q03403 129 aa14.55□□□□□ -0.08
HMGXB3-202ENST00000503427 TMEM268Q5VZI3 342 aa14.55□□□□□ -0.08
HMGXB3-202ENST00000503427 ADAM19Q9H013 955 aa14.55□□□□□ -0.08
HMGXB3-202ENST00000503427 NDUFB6O95139 128 aa14.55□□□□□ -0.08
HMGXB3-202ENST00000503427 ZNF239Q16600 458 aaKnown RBP14.55□□□□□ -0.08
HMGXB3-202ENST00000503427 CCDC71Q8IV32 467 aaPredicted RBP14.55□□□□□ -0.08
HMGXB3-202ENST00000503427 ARRDC1Q8N5I2 433 aa14.55□□□□□ -0.08
HMGXB3-202ENST00000503427 REEP6Q96HR9 211 aa14.55□□□□□ -0.08
HMGXB3-202ENST00000503427 MMP25Q9NPA2 562 aa14.55□□□□□ -0.08
HMGXB3-202ENST00000503427 LRP3O75074 770 aa14.55□□□□□ -0.08
HMGXB3-202ENST00000503427 EPHA8P29322 1005 aaPredicted RBP14.55□□□□□ -0.08
HMGXB3-202ENST00000503427 EDDM3AQ14507 147 aa14.55□□□□□ -0.08
HMGXB3-202ENST00000503427 ZNF764Q96H86 408 aaPredicted RBP14.55□□□□□ -0.08
HMGXB3-202ENST00000503427 GNG13Q9P2W3 67 aa14.55□□□□□ -0.08
HMGXB3-202ENST00000503427 NKX6-3A6NJ46 265 aa14.55□□□□□ -0.08
HMGXB3-202ENST00000503427 RFPL4AA6NLU0 287 aa14.55□□□□□ -0.08
HMGXB3-202ENST00000503427 SERPINE3A8MV23 424 aa14.55□□□□□ -0.08
HMGXB3-202ENST00000503427 RFPL4AL1F8VTS6 287 aa14.55□□□□□ -0.08
HMGXB3-202ENST00000503427 MYF5P13349 255 aa14.55□□□□□ -0.08
HMGXB3-202ENST00000503427 TMEM128Q5BJH2 165 aa14.55□□□□□ -0.08
HMGXB3-202ENST00000503427 ZNF485Q8NCK3 441 aa14.55□□□□□ -0.08
HMGXB3-202ENST00000503427 HPSE2Q8WWQ2 592 aa14.55□□□□□ -0.08
HMGXB3-202ENST00000503427 PELI1Q96FA3 418 aa14.55□□□□□ -0.08
HMGXB3-202ENST00000503427 DHRS9Q9BPW9 319 aa14.55□□□□□ -0.08
HMGXB3-202ENST00000503427 IGHV5-51A0A0C4DH38 117 aa14.54□□□□□ -0.08
HMGXB3-202ENST00000503427 PMS2P1A4D2B8 440 aa14.54□□□□□ -0.08
HMGXB3-202ENST00000503427 TRIM77I1YAP6 450 aa14.54□□□□□ -0.08
HMGXB3-202ENST00000503427 DHHO43323 396 aa14.54□□□□□ -0.08
HMGXB3-202ENST00000503427 MOSPD3O75425 235 aa14.54□□□□□ -0.08
HMGXB3-202ENST00000503427 CT45A6P0DMU7 189 aa14.54□□□□□ -0.08
HMGXB3-202ENST00000503427 CT45A5P0DMU8 189 aa14.54□□□□□ -0.08
HMGXB3-202ENST00000503427 CT45A7P0DMV0 189 aa14.54□□□□□ -0.08
HMGXB3-202ENST00000503427 CT45A8P0DMV1 189 aa14.54□□□□□ -0.08
HMGXB3-202ENST00000503427 CT45A9P0DMV2 189 aa14.54□□□□□ -0.08
HMGXB3-202ENST00000503427 MPLP40238 635 aa14.54□□□□□ -0.08
HMGXB3-202ENST00000503427 ZNF121P58317 390 aaPredicted RBP14.54□□□□□ -0.08
HMGXB3-202ENST00000503427 OR8B8Q15620 311 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 91.7 ms