RNA–Protein interactions for RNA: ENST00000497960.5

NUP50-219, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 986 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-219ENST00000497960 LCATP04180 440 aa12.98□□□□□ -0.33
NUP50-219ENST00000497960 LYNP07948 512 aa12.98□□□□□ -0.33
NUP50-219ENST00000497960 GNAO1P09471 354 aa12.98□□□□□ -0.33
NUP50-219ENST00000497960 ACSM4P0C7M7 580 aa12.98□□□□□ -0.33
NUP50-219ENST00000497960 SELEP16581 610 aa12.98□□□□□ -0.33
NUP50-219ENST00000497960 ATP6V1E1P36543 226 aa12.98□□□□□ -0.33
NUP50-219ENST00000497960 SRP14P37108 136 aaKnown RBP12.98□□□□□ -0.33
NUP50-219ENST00000497960 MTNR1AP48039 350 aa12.98□□□□□ -0.33
NUP50-219ENST00000497960 TPTEP56180 551 aa12.98□□□□□ -0.33
NUP50-219ENST00000497960 ZNF91Q05481 1191 aa12.98□□□□□ -0.33
NUP50-219ENST00000497960 TMED1Q13445 227 aa12.98□□□□□ -0.33
NUP50-219ENST00000497960 PCK2Q16822 640 aa12.98□□□□□ -0.33
NUP50-219ENST00000497960 KRTAP27-1Q3LI81 207 aa12.98□□□□□ -0.33
NUP50-219ENST00000497960 SLC25A30Q5SVS4 291 aa12.98□□□□□ -0.33
NUP50-219ENST00000497960 OR2T2Q6IF00 324 aa12.98□□□□□ -0.33
NUP50-219ENST00000497960 Q6ZR03 302 aa12.98□□□□□ -0.33
NUP50-219ENST00000497960 COLCA1Q6ZS62 124 aa12.98□□□□□ -0.33
NUP50-219ENST00000497960 OR5AS1Q8N127 324 aa12.98□□□□□ -0.33
NUP50-219ENST00000497960 ZNF454Q8N9F8 522 aa12.98□□□□□ -0.33
NUP50-219ENST00000497960 OTOSQ8NHW6 89 aa12.98□□□□□ -0.33
NUP50-219ENST00000497960 THEM6Q8WUY1 208 aa12.98□□□□□ -0.33
NUP50-219ENST00000497960 APH1BQ8WW43 257 aa12.98□□□□□ -0.33
NUP50-219ENST00000497960 TFAP2CQ92754 450 aa12.98□□□□□ -0.33
NUP50-219ENST00000497960 SPTSSAQ969W0 71 aa12.98□□□□□ -0.33
NUP50-219ENST00000497960 TMEM186Q96B77 213 aa12.98□□□□□ -0.33
NUP50-219ENST00000497960 SLAMF6Q96DU3 332 aa12.98□□□□□ -0.33
NUP50-219ENST00000497960 RNFT2Q96EX2 444 aa12.98□□□□□ -0.33
NUP50-219ENST00000497960 GAL3ST1Q99999 423 aa12.98□□□□□ -0.33
NUP50-219ENST00000497960 C1QTNF5Q9BXJ0 243 aa12.98□□□□□ -0.33
NUP50-219ENST00000497960 TTTY10Q9BZA0 68 aa12.98□□□□□ -0.33
NUP50-219ENST00000497960 YIPF3Q9GZM5 350 aa12.98□□□□□ -0.33
NUP50-219ENST00000497960 ZNF665Q9H7R5 613 aa12.98□□□□□ -0.33
NUP50-219ENST00000497960 ADGRL4Q9HBW9 690 aa12.98□□□□□ -0.33
NUP50-219ENST00000497960 CENPMQ9NSP4 180 aa12.98□□□□□ -0.33
NUP50-219ENST00000497960 HIF1ANQ9NWT6 349 aa12.98□□□□□ -0.33
NUP50-219ENST00000497960 HAO2Q9NYQ3 351 aa12.98□□□□□ -0.33
NUP50-219ENST00000497960 HSPE1-MOB4S4R3N1 261 aa12.98□□□□□ -0.33
NUP50-219ENST00000497960 WNK2Q9Y3S1 2297 aa12.98□□□□□ -0.33
NUP50-219ENST00000497960 ISPDA4D126 451 aa12.97□□□□□ -0.33
NUP50-219ENST00000497960 ZNF670-ZNF695F2Z2N8 137 aa12.97□□□□□ -0.33
NUP50-219ENST00000497960 SBK2P0C263 348 aa12.97□□□□□ -0.33
NUP50-219ENST00000497960 DBTP11182 482 aaKnown RBP12.97□□□□□ -0.33
NUP50-219ENST00000497960 THBS2P35442 1172 aa12.97□□□□□ -0.33
NUP50-219ENST00000497960 MALLQ13021 153 aa12.97□□□□□ -0.33
NUP50-219ENST00000497960 TAF13Q15543 124 aa12.97□□□□□ -0.33
NUP50-219ENST00000497960 RSPO1Q2MKA7 263 aaPredicted RBP12.97□□□□□ -0.33
NUP50-219ENST00000497960 SPATC1Q76KD6 591 aa12.97□□□□□ -0.33
NUP50-219ENST00000497960 OR8G5Q8NG78 346 aa12.97□□□□□ -0.33
NUP50-219ENST00000497960 OR10S1Q8NGN2 331 aa12.97□□□□□ -0.33
NUP50-219ENST00000497960 OR13G1Q8NGZ3 307 aa12.97□□□□□ -0.33
NUP50-219ENST00000497960 ST7LQ8TDW4 575 aa12.97□□□□□ -0.33
NUP50-219ENST00000497960 ITLN1Q8WWA0 313 aa12.97□□□□□ -0.33
NUP50-219ENST00000497960 TBX5Q99593 518 aa12.97□□□□□ -0.33
NUP50-219ENST00000497960 ZNF184Q99676 751 aaPredicted RBP12.97□□□□□ -0.33
NUP50-219ENST00000497960 ABHD6Q9BV23 337 aa12.97□□□□□ -0.33
NUP50-219ENST00000497960 RASSF4Q9H2L5 321 aa12.97□□□□□ -0.33
NUP50-219ENST00000497960 PNRC2Q9NPJ4 139 aaKnown RBP12.97□□□□□ -0.33
NUP50-219ENST00000497960 TMEM106BQ9NUM4 274 aa12.97□□□□□ -0.33
NUP50-219ENST00000497960 IL19Q9UHD0 177 aa12.97□□□□□ -0.33
NUP50-219ENST00000497960 TMEM14AQ9Y6G1 99 aa12.97□□□□□ -0.33
NUP50-219ENST00000497960 TRAV20A0A0B4J274 112 aa12.96□□□□□ -0.33
NUP50-219ENST00000497960 RNF212BA8MTL3 300 aa12.96□□□□□ -0.33
NUP50-219ENST00000497960 IQCF6A8MYZ5 107 aa12.96□□□□□ -0.33
NUP50-219ENST00000497960 M0R135 149 aa12.96□□□□□ -0.33
NUP50-219ENST00000497960 PHYHO14832 338 aa12.96□□□□□ -0.33
NUP50-219ENST00000497960 HSD11B1P28845 292 aa12.96□□□□□ -0.33
NUP50-219ENST00000497960 SLC6A9P48067 706 aa12.96□□□□□ -0.33
NUP50-219ENST00000497960 SPRNQ5BIV9 151 aa12.96□□□□□ -0.33
NUP50-219ENST00000497960 THAP5Q7Z6K1 395 aa12.96□□□□□ -0.33
NUP50-219ENST00000497960 OR10H4Q8NGA5 316 aa12.96□□□□□ -0.33
NUP50-219ENST00000497960 TMEM158Q8WZ71 300 aa12.96□□□□□ -0.33
NUP50-219ENST00000497960 ZNF799Q96GE5 643 aa12.96□□□□□ -0.33
NUP50-219ENST00000497960 OR2V2Q96R30 315 aa12.96□□□□□ -0.33
NUP50-219ENST00000497960 MNTQ99583 582 aa12.96□□□□□ -0.33
NUP50-219ENST00000497960 DDX28Q9NUL7 540 aaKnown RBP12.96□□□□□ -0.33
NUP50-219ENST00000497960 RAB26Q9ULW5 256 aa12.96□□□□□ -0.33
NUP50-219ENST00000497960 COPS3Q9UNS2 423 aa12.96□□□□□ -0.33
NUP50-219ENST00000497960 PPP1R3CQ9UQK1 317 aa12.96□□□□□ -0.33
NUP50-219ENST00000497960 KLHDC2Q9Y2U9 406 aa12.96□□□□□ -0.33
NUP50-219ENST00000497960 RPL36Q9Y3U8 105 aaKnown RBP12.96□□□□□ -0.33
NUP50-219ENST00000497960 NPTNQ9Y639 398 aa12.96□□□□□ -0.33
NUP50-219ENST00000497960 IFNL4K9M1U5 179 aa12.95□□□□□ -0.34
NUP50-219ENST00000497960 PHF1O43189 567 aaPredicted RBP12.95□□□□□ -0.34
NUP50-219ENST00000497960 WBP4O75554 376 aaKnown RBP12.95□□□□□ -0.34
NUP50-219ENST00000497960 IGHV2-5P01817 119 aa12.95□□□□□ -0.34
NUP50-219ENST00000497960 H2BFMP0C1H6 154 aa12.95□□□□□ -0.34
NUP50-219ENST00000497960 SRP9P49458 86 aaKnown RBP12.95□□□□□ -0.34
NUP50-219ENST00000497960 HCCSP53701 268 aa12.95□□□□□ -0.34
NUP50-219ENST00000497960 ISL1P61371 349 aa12.95□□□□□ -0.34
NUP50-219ENST00000497960 GRB2P62993 217 aaKnown RBP12.95□□□□□ -0.34
NUP50-219ENST00000497960 ACTC1P68032 377 aa12.95□□□□□ -0.34
NUP50-219ENST00000497960 ACTA1P68133 377 aa12.95□□□□□ -0.34
NUP50-219ENST00000497960 SMN1Q16637 294 aaKnown RBP12.95□□□□□ -0.34
NUP50-219ENST00000497960 PGAP1Q75T13 922 aa12.95□□□□□ -0.34
NUP50-219ENST00000497960 MRPL21Q7Z2W9 205 aaKnown RBP12.95□□□□□ -0.34
NUP50-219ENST00000497960 KRT77Q7Z794 578 aa12.95□□□□□ -0.34
NUP50-219ENST00000497960 RFLNBQ8N5W9 214 aa12.95□□□□□ -0.34
NUP50-219ENST00000497960 ZNF283Q8N7M2 679 aa12.95□□□□□ -0.34
NUP50-219ENST00000497960 BHLHE23Q8NDY6 225 aa12.95□□□□□ -0.34
NUP50-219ENST00000497960 RNF133Q8WVZ7 376 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms