RNA–Protein interactions for RNA: ENST00000494458.1

MSH5-217, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 520 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-217ENST00000494458 A6NJ64 397 aa5.9□□□□□ -1.46
MSH5-217ENST00000494458 F5H5K5 113 aa5.9□□□□□ -1.46
MSH5-217ENST00000494458 TBX1O43435 398 aa5.9□□□□□ -1.46
MSH5-217ENST00000494458 XRCC3O43542 346 aa5.9□□□□□ -1.46
MSH5-217ENST00000494458 DOK2O60496 412 aa5.9□□□□□ -1.46
MSH5-217ENST00000494458 PTTG1O95997 202 aa5.9□□□□□ -1.46
MSH5-217ENST00000494458 MAS1P04201 325 aa5.9□□□□□ -1.46
MSH5-217ENST00000494458 PATE4P0C8F1 98 aa5.9□□□□□ -1.46
MSH5-217ENST00000494458 NAT2P11245 290 aa5.9□□□□□ -1.46
MSH5-217ENST00000494458 RAB6AP20340 208 aa5.9□□□□□ -1.46
MSH5-217ENST00000494458 IGHV1-2P23083 117 aa5.9□□□□□ -1.46
MSH5-217ENST00000494458 BDKRB2P30411 391 aa5.9□□□□□ -1.46
MSH5-217ENST00000494458 THBS4P35443 961 aa5.9□□□□□ -1.46
MSH5-217ENST00000494458 RANBP1P43487 201 aa5.9□□□□□ -1.46
MSH5-217ENST00000494458 PTH2RP49190 550 aa5.9□□□□□ -1.46
MSH5-217ENST00000494458 FAPQ12884 760 aa5.9□□□□□ -1.46
MSH5-217ENST00000494458 TAF13Q15543 124 aa5.9□□□□□ -1.46
MSH5-217ENST00000494458 GABRA6Q16445 453 aa5.9□□□□□ -1.46
MSH5-217ENST00000494458 SNAI3Q3KNW1 292 aa5.9□□□□□ -1.46
MSH5-217ENST00000494458 C2orf76Q3KRA6 126 aa5.9□□□□□ -1.46
MSH5-217ENST00000494458 PABPC1L2AQ5JQF8 200 aa5.9□□□□□ -1.46
MSH5-217ENST00000494458 FAM131AQ6UXB0 335 aa5.9□□□□□ -1.46
MSH5-217ENST00000494458 ASCL4Q6XD76 172 aa5.9□□□□□ -1.46
MSH5-217ENST00000494458 FAM57BQ71RH2 274 aa5.9□□□□□ -1.46
MSH5-217ENST00000494458 ZC3HAV1Q7Z2W4 902 aaKnown RBP5.9□□□□□ -1.46
MSH5-217ENST00000494458 SNX29P2Q8IUI4 249 aa5.9□□□□□ -1.46
MSH5-217ENST00000494458 CENPSQ8N2Z9 138 aa5.9□□□□□ -1.46
MSH5-217ENST00000494458 PAQR4Q8N4S7 273 aaPredicted RBP5.9□□□□□ -1.46
MSH5-217ENST00000494458 SAMD12Q8N8I0 201 aa5.9□□□□□ -1.46
MSH5-217ENST00000494458 DUSP18Q8NEJ0 188 aa5.9□□□□□ -1.46
MSH5-217ENST00000494458 OR1M1Q8NGA1 313 aa5.9□□□□□ -1.46
MSH5-217ENST00000494458 OR4M1Q8NGD0 313 aa5.9□□□□□ -1.46
MSH5-217ENST00000494458 OR51A2Q8NGJ7 313 aa5.9□□□□□ -1.46
MSH5-217ENST00000494458 OR13C3Q8NGS6 347 aa5.9□□□□□ -1.46
MSH5-217ENST00000494458 FAM57AQ8TBR7 257 aa5.9□□□□□ -1.46
MSH5-217ENST00000494458 LGALS14Q8TCE9 139 aa5.9□□□□□ -1.46
MSH5-217ENST00000494458 TSEN15Q8WW01 171 aaKnown RBP5.9□□□□□ -1.46
MSH5-217ENST00000494458 SLC7A6Q92536 515 aa5.9□□□□□ -1.46
MSH5-217ENST00000494458 TRIM63Q969Q1 353 aa5.9□□□□□ -1.46
MSH5-217ENST00000494458 FAM3DQ96BQ1 224 aa5.9□□□□□ -1.46
MSH5-217ENST00000494458 ZC3HAV1LQ96H79 300 aaKnown RBP5.9□□□□□ -1.46
MSH5-217ENST00000494458 COX4I2Q96KJ9 171 aa5.9□□□□□ -1.46
MSH5-217ENST00000494458 NUDT16L1Q9BRJ7 211 aaKnown RBP5.9□□□□□ -1.46
MSH5-217ENST00000494458 REPIN1Q9BWE0 567 aaKnown RBP5.9□□□□□ -1.46
MSH5-217ENST00000494458 CHST5Q9GZS9 411 aa5.9□□□□□ -1.46
MSH5-217ENST00000494458 SLC25A18Q9H1K4 315 aa5.9□□□□□ -1.46
MSH5-217ENST00000494458 OR10A2Q9H208 303 aa5.9□□□□□ -1.46
MSH5-217ENST00000494458 METTL17Q9H7H0 456 aaPredicted RBP5.9□□□□□ -1.46
MSH5-217ENST00000494458 PLEKHA1Q9HB21 404 aa5.9□□□□□ -1.46
MSH5-217ENST00000494458 NOX3Q9HBY0 568 aa5.9□□□□□ -1.46
MSH5-217ENST00000494458 ZNF71Q9NQZ8 489 aaPredicted RBP5.9□□□□□ -1.46
MSH5-217ENST00000494458 TBCCD1Q9NVR7 557 aa5.9□□□□□ -1.46
MSH5-217ENST00000494458 UPB1Q9UBR1 384 aa5.9□□□□□ -1.46
MSH5-217ENST00000494458 CKLFQ9UBR5 152 aa5.9□□□□□ -1.46
MSH5-217ENST00000494458 CLEC4AQ9UMR7 237 aa5.9□□□□□ -1.46
MSH5-217ENST00000494458 TP53TG5Q9Y2B4 290 aa5.9□□□□□ -1.46
MSH5-217ENST00000494458 RTTNQ86VV8 2226 aa5.9□□□□□ -1.47
MSH5-217ENST00000494458 SPTBN2O15020 2390 aa5.89□□□□□ -1.47
MSH5-217ENST00000494458 SPENQ96T58 3664 aaKnown RBP5.89□□□□□ -1.47
MSH5-217ENST00000494458 MED12LQ86YW9 2145 aa5.89□□□□□ -1.47
MSH5-217ENST00000494458 A0A0G2JMP0 313 aa5.89□□□□□ -1.47
MSH5-217ENST00000494458 A0A0X1KG70 313 aa5.89□□□□□ -1.47
MSH5-217ENST00000494458 LOC100289279A0A1B0GTE1 492 aa5.89□□□□□ -1.47
MSH5-217ENST00000494458 hCG_38984A0A1B0GV85 526 aa5.89□□□□□ -1.47
MSH5-217ENST00000494458 ANXA2P2A6NMY6 339 aa5.89□□□□□ -1.47
MSH5-217ENST00000494458 TMEM14DPA8MWL7 114 aa5.89□□□□□ -1.47
MSH5-217ENST00000494458 MTRF1O75570 445 aaKnown RBP5.89□□□□□ -1.47
MSH5-217ENST00000494458 IGKV3-15P01624 115 aa5.89□□□□□ -1.47
MSH5-217ENST00000494458 IGHV3-9P01782 118 aa5.89□□□□□ -1.47
MSH5-217ENST00000494458 SERPINA5P05154 406 aa5.89□□□□□ -1.47
MSH5-217ENST00000494458 ANXA2P07355 339 aaKnown RBP5.89□□□□□ -1.47
MSH5-217ENST00000494458 ERCC1P07992 297 aaPredicted RBP5.89□□□□□ -1.47
MSH5-217ENST00000494458 SLC2A1P11166 492 aa5.89□□□□□ -1.47
MSH5-217ENST00000494458 ABOP16442 354 aa5.89□□□□□ -1.47
MSH5-217ENST00000494458 ZNF14P17017 642 aaPredicted RBP5.89□□□□□ -1.47
MSH5-217ENST00000494458 RAB3AP20336 220 aa5.89□□□□□ -1.47
MSH5-217ENST00000494458 ACKR3P25106 362 aa5.89□□□□□ -1.47
MSH5-217ENST00000494458 HTR2CP28335 458 aa5.89□□□□□ -1.47
MSH5-217ENST00000494458 RFX2P48378 723 aa5.89□□□□□ -1.47
MSH5-217ENST00000494458 GSK3AP49840 483 aa5.89□□□□□ -1.47
MSH5-217ENST00000494458 ART1P52961 327 aa5.89□□□□□ -1.47
MSH5-217ENST00000494458 RAB1AP62820 205 aa5.89□□□□□ -1.47
MSH5-217ENST00000494458 MRPS10P82664 201 aaKnown RBP5.89□□□□□ -1.47
MSH5-217ENST00000494458 FAM3AP98173 230 aa5.89□□□□□ -1.47
MSH5-217ENST00000494458 GALK2Q01415 458 aa5.89□□□□□ -1.47
MSH5-217ENST00000494458 TGFBR3Q03167 851 aa5.89□□□□□ -1.47
MSH5-217ENST00000494458 SCN1BQ07699 218 aa5.89□□□□□ -1.47
MSH5-217ENST00000494458 P2RY6Q15077 328 aa5.89□□□□□ -1.47
MSH5-217ENST00000494458 UBE2V2Q15819 145 aa5.89□□□□□ -1.47
MSH5-217ENST00000494458 ODF4Q2M2E3 257 aa5.89□□□□□ -1.47
MSH5-217ENST00000494458 C3orf36Q3SXR2 165 aa5.89□□□□□ -1.47
MSH5-217ENST00000494458 SFRP5Q5T4F7 317 aa5.89□□□□□ -1.47
MSH5-217ENST00000494458 HES5Q5TA89 166 aa5.89□□□□□ -1.47
MSH5-217ENST00000494458 GDPD3Q7L5L3 318 aa5.89□□□□□ -1.47
MSH5-217ENST00000494458 CDH24Q86UP0 819 aa5.89□□□□□ -1.47
MSH5-217ENST00000494458 Q8N402 240 aa5.89□□□□□ -1.47
MSH5-217ENST00000494458 C17orf78Q8N4C9 275 aa5.89□□□□□ -1.47
MSH5-217ENST00000494458 FAM89BQ8N5H3 189 aa5.89□□□□□ -1.47
MSH5-217ENST00000494458 WDR31Q8NA23 367 aa5.89□□□□□ -1.47
MSH5-217ENST00000494458 DNAAF1Q8NEP3 725 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms