RNA–Protein interactions for RNA: ENST00000491592.1

RTN4-215, Transcript of reticulon 4, human

TSL 2

Gene RTN4, Length 860 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RTN4-215	ENST00000491592	OR5AK3P	Q8NH89	298 aa		4.13	□□□□□ -1.75
RTN4-215	ENST00000491592	OR14A16	Q8NHC5	309 aa		4.13	□□□□□ -1.75
RTN4-215	ENST00000491592	APH1B	Q8WW43	257 aa		4.13	□□□□□ -1.75
RTN4-215	ENST00000491592	TADA1	Q96BN2	335 aa		4.13	□□□□□ -1.75
RTN4-215	ENST00000491592	UPRT	Q96BW1	309 aa		4.13	□□□□□ -1.75
RTN4-215	ENST00000491592	TMEM19	Q96HH6	336 aa		4.13	□□□□□ -1.75
RTN4-215	ENST00000491592		Q96MT0	163 aa		4.13	□□□□□ -1.75
RTN4-215	ENST00000491592	NEDD4L	Q96PU5	975 aa		4.13	□□□□□ -1.75
RTN4-215	ENST00000491592	OR52E6	Q96RD3	313 aa		4.13	□□□□□ -1.75
RTN4-215	ENST00000491592	KCNA7	Q96RP8	456 aa		4.13	□□□□□ -1.75
RTN4-215	ENST00000491592	MGLL	Q99685	303 aa		4.13	□□□□□ -1.75
RTN4-215	ENST00000491592	MICU1	Q9BPX6	476 aa		4.13	□□□□□ -1.75
RTN4-215	ENST00000491592	KLHDC3	Q9BQ90	382 aa		4.13	□□□□□ -1.75
RTN4-215	ENST00000491592	MED18	Q9BUE0	208 aa		4.13	□□□□□ -1.75
RTN4-215	ENST00000491592	TAPBPL	Q9BX59	468 aa		4.13	□□□□□ -1.75
RTN4-215	ENST00000491592	ULBP1	Q9BZM6	244 aa		4.13	□□□□□ -1.75
RTN4-215	ENST00000491592	UCK2	Q9BZX2	261 aa		4.13	□□□□□ -1.75
RTN4-215	ENST00000491592	OR51E2	Q9H255	320 aa		4.13	□□□□□ -1.75
RTN4-215	ENST00000491592	PPA2	Q9H2U2	334 aa		4.13	□□□□□ -1.75
RTN4-215	ENST00000491592	ESRP2	Q9H6T0	727 aa	Known RBP	4.13	□□□□□ -1.75
RTN4-215	ENST00000491592	NT5DC2	Q9H857	520 aa		4.13	□□□□□ -1.75
RTN4-215	ENST00000491592	PRSS16	Q9NQE7	514 aa		4.13	□□□□□ -1.75
RTN4-215	ENST00000491592	SLC2A9	Q9NRM0	540 aa		4.13	□□□□□ -1.75
RTN4-215	ENST00000491592	INPP5E	Q9NRR6	644 aa		4.13	□□□□□ -1.75
RTN4-215	ENST00000491592	CLN6	Q9NWW5	311 aa		4.13	□□□□□ -1.75
RTN4-215	ENST00000491592	ELF5	Q9UKW6	265 aa	Predicted RBP	4.13	□□□□□ -1.75
RTN4-215	ENST00000491592	ICAM5	Q9UMF0	924 aa		4.13	□□□□□ -1.75
RTN4-215	ENST00000491592	SSR3	Q9UNL2	185 aa		4.13	□□□□□ -1.75
RTN4-215	ENST00000491592	ING4	Q9UNL4	249 aa		4.13	□□□□□ -1.75
RTN4-215	ENST00000491592	NEUROG3	Q9Y4Z2	214 aa		4.13	□□□□□ -1.75
RTN4-215	ENST00000491592	ETV7	Q9Y603	341 aa		4.13	□□□□□ -1.75
RTN4-215	ENST00000491592	FKBP7	Q9Y680	259 aa		4.13	□□□□□ -1.75
RTN4-215	ENST00000491592		V9GYH0	126 aa		4.13	□□□□□ -1.75
RTN4-215	ENST00000491592		A0A0X1KG70	313 aa		4.12	□□□□□ -1.75
RTN4-215	ENST00000491592	IRGM	A1A4Y4	181 aa		4.12	□□□□□ -1.75
RTN4-215	ENST00000491592	ARRDC5	A6NEK1	342 aa		4.12	□□□□□ -1.75
RTN4-215	ENST00000491592	ANTXRL	A6NF34	631 aa		4.12	□□□□□ -1.75
RTN4-215	ENST00000491592	ZNF670-ZNF695	F2Z2N8	137 aa		4.12	□□□□□ -1.75
RTN4-215	ENST00000491592		H0YL77	283 aa		4.12	□□□□□ -1.75
RTN4-215	ENST00000491592	RGS5	O15539	181 aa		4.12	□□□□□ -1.75
RTN4-215	ENST00000491592	DIRAS1	O95057	198 aa		4.12	□□□□□ -1.75
RTN4-215	ENST00000491592	NXPH2	O95156	264 aa		4.12	□□□□□ -1.75
RTN4-215	ENST00000491592	UTS2	O95399	124 aa		4.12	□□□□□ -1.75
RTN4-215	ENST00000491592	ACTL6A	O96019	429 aa		4.12	□□□□□ -1.75
RTN4-215	ENST00000491592	GAPDH	P04406	335 aa	Known RBP	4.12	□□□□□ -1.75
RTN4-215	ENST00000491592	ZNF43	P17038	809 aa		4.12	□□□□□ -1.75
RTN4-215	ENST00000491592	PGC	P20142	388 aa		4.12	□□□□□ -1.75
RTN4-215	ENST00000491592	PSMA1	P25786	263 aa	Known RBP	4.12	□□□□□ -1.75
RTN4-215	ENST00000491592	LMO2	P25791	158 aa		4.12	□□□□□ -1.75
RTN4-215	ENST00000491592	C21orf33	P30042	268 aa	Predicted RBP	4.12	□□□□□ -1.75
RTN4-215	ENST00000491592	SDC2	P34741	201 aa		4.12	□□□□□ -1.75
RTN4-215	ENST00000491592	ARR3	P36575	388 aa		4.12	□□□□□ -1.75
RTN4-215	ENST00000491592	TGFBR1	P36897	503 aa		4.12	□□□□□ -1.75
RTN4-215	ENST00000491592	RBM34	P42696	430 aa	Known RBP	4.12	□□□□□ -1.75
RTN4-215	ENST00000491592	P2RY1	P47900	373 aa		4.12	□□□□□ -1.75
RTN4-215	ENST00000491592	RIDA	P52758	137 aa	Known RBP	4.12	□□□□□ -1.75
RTN4-215	ENST00000491592	STC1	P52823	247 aa		4.12	□□□□□ -1.75
RTN4-215	ENST00000491592	TMEM50B	P56557	158 aa		4.12	□□□□□ -1.75
RTN4-215	ENST00000491592	CLDN20	P56880	219 aa		4.12	□□□□□ -1.75
RTN4-215	ENST00000491592	KRTAP10-9	P60411	292 aa		4.12	□□□□□ -1.75
RTN4-215	ENST00000491592	ERVPABLB-1	P60509	514 aa		4.12	□□□□□ -1.75
RTN4-215	ENST00000491592	CDC42	P60953	191 aa		4.12	□□□□□ -1.75
RTN4-215	ENST00000491592	ERVK11-1	P61568	191 aa		4.12	□□□□□ -1.75
RTN4-215	ENST00000491592	RRAS2	P62070	204 aa	Predicted RBP	4.12	□□□□□ -1.75
RTN4-215	ENST00000491592	PPP3R1	P63098	170 aa		4.12	□□□□□ -1.75
RTN4-215	ENST00000491592	MRPS6	P82932	125 aa	Known RBP	4.12	□□□□□ -1.75
RTN4-215	ENST00000491592	RGS1	Q08116	209 aa		4.12	□□□□□ -1.75
RTN4-215	ENST00000491592	C1orf61	Q13536	156 aa		4.12	□□□□□ -1.75
RTN4-215	ENST00000491592	SF3A2	Q15428	464 aa	Known RBP	4.12	□□□□□ -1.75
RTN4-215	ENST00000491592	TSN	Q15631	228 aa	Known RBP	4.12	□□□□□ -1.75
RTN4-215	ENST00000491592	GRK1	Q15835	563 aa		4.12	□□□□□ -1.75
RTN4-215	ENST00000491592	ZNF79	Q15937	498 aa		4.12	□□□□□ -1.75
RTN4-215	ENST00000491592	MS4A18	Q3C1V0	323 aa		4.12	□□□□□ -1.75
RTN4-215	ENST00000491592	PDZD11	Q5EBL8	140 aa		4.12	□□□□□ -1.75
RTN4-215	ENST00000491592	SIRPB2	Q5JXA9	342 aa		4.12	□□□□□ -1.75
RTN4-215	ENST00000491592	CLLU1	Q5K131	121 aa		4.12	□□□□□ -1.75
RTN4-215	ENST00000491592	PDSS1	Q5T2R2	415 aa		4.12	□□□□□ -1.75
RTN4-215	ENST00000491592	DDI2	Q5TDH0	399 aa		4.12	□□□□□ -1.75
RTN4-215	ENST00000491592	MARC1	Q5VT66	337 aa		4.12	□□□□□ -1.75
RTN4-215	ENST00000491592	HACD4	Q5VWC8	232 aa		4.12	□□□□□ -1.75
RTN4-215	ENST00000491592	BHLHB9	Q6PI77	547 aa		4.12	□□□□□ -1.75
RTN4-215	ENST00000491592	FAM131A	Q6UXB0	335 aa		4.12	□□□□□ -1.75
RTN4-215	ENST00000491592	CEACAM20	Q6UY09	585 aa		4.12	□□□□□ -1.75
RTN4-215	ENST00000491592	TMEM184A	Q6ZMB5	413 aa		4.12	□□□□□ -1.75
RTN4-215	ENST00000491592	C9orf47	Q6ZRZ4	202 aa		4.12	□□□□□ -1.75
RTN4-215	ENST00000491592	CLEC20A	Q6ZU45	233 aa		4.12	□□□□□ -1.75
RTN4-215	ENST00000491592	ACOT7L	Q6ZUV0	252 aa		4.12	□□□□□ -1.75
RTN4-215	ENST00000491592	ASB18	Q6ZVZ8	466 aa		4.12	□□□□□ -1.75
RTN4-215	ENST00000491592		Q7L0L9	218 aa		4.12	□□□□□ -1.75
RTN4-215	ENST00000491592	OR2W3	Q7Z3T1	314 aa		4.12	□□□□□ -1.75
RTN4-215	ENST00000491592	ANKRD37	Q7Z713	158 aa		4.12	□□□□□ -1.75
RTN4-215	ENST00000491592	CCDC71	Q8IV32	467 aa	Predicted RBP	4.12	□□□□□ -1.75
RTN4-215	ENST00000491592	MSRB3	Q8IXL7	192 aa		4.12	□□□□□ -1.75
RTN4-215	ENST00000491592	UMODL1-AS1	Q8N2C9	162 aa		4.12	□□□□□ -1.75
RTN4-215	ENST00000491592	STK40	Q8N2I9	435 aa		4.12	□□□□□ -1.75
RTN4-215	ENST00000491592	TMEM251	Q8N6I4	163 aa		4.12	□□□□□ -1.75
RTN4-215	ENST00000491592	PRR26	Q8N8Z3	221 aa		4.12	□□□□□ -1.75
RTN4-215	ENST00000491592	DMBX1	Q8NFW5	382 aa		4.12	□□□□□ -1.75
RTN4-215	ENST00000491592	OR4F6	Q8NGB9	312 aa		4.12	□□□□□ -1.75
RTN4-215	ENST00000491592	OR10A7	Q8NGE5	316 aa		4.12	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 164.1 ms