RNA–Protein interactions for RNA: ENST00000489272.5

CBWD1-216, Transcript of COBW domain containing 1, humanhuman

TSL 5

Gene CBWD1, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-216ENST00000489272 SLC41A3Q96GZ6 507 aa0.64□□□□□ -2.31
CBWD1-216ENST00000489272 OR4K3Q96R72 315 aa0.64□□□□□ -2.31
CBWD1-216ENST00000489272 SLIRPQ9GZT3 109 aaKnown RBP0.64□□□□□ -2.31
CBWD1-216ENST00000489272 FBXO8Q9NRD0 319 aa0.64□□□□□ -2.31
CBWD1-216ENST00000489272 CSDC2Q9Y534 153 aaKnown RBP0.64□□□□□ -2.31
CBWD1-216ENST00000489272 HES2Q9Y543 173 aa0.64□□□□□ -2.31
CBWD1-216ENST00000489272 PLXNA3P51805 1871 aa0.64□□□□□ -2.31
CBWD1-216ENST00000489272 BRD4O60885 1362 aaPredicted RBP0.63□□□□□ -2.31
CBWD1-216ENST00000489272 IGHV3OR16-9A0A0B4J2B5 98 aa0.63□□□□□ -2.31
CBWD1-216ENST00000489272 TRGV4A0A0C4DH28 118 aa0.63□□□□□ -2.31
CBWD1-216ENST00000489272 NCBP2LA6PVI3 153 aaKnown RBP0.63□□□□□ -2.31
CBWD1-216ENST00000489272 H7C1H1 209 aa0.63□□□□□ -2.31
CBWD1-216ENST00000489272 RAD51CO43502 376 aa0.63□□□□□ -2.31
CBWD1-216ENST00000489272 PSCAO43653 123 aa0.63□□□□□ -2.31
CBWD1-216ENST00000489272 CT45A6P0DMU7 189 aa0.63□□□□□ -2.31
CBWD1-216ENST00000489272 CT45A5P0DMU8 189 aa0.63□□□□□ -2.31
CBWD1-216ENST00000489272 CT45A7P0DMV0 189 aa0.63□□□□□ -2.31
CBWD1-216ENST00000489272 HTR1DP28221 377 aa0.63□□□□□ -2.31
CBWD1-216ENST00000489272 CD86P42081 329 aa0.63□□□□□ -2.31
CBWD1-216ENST00000489272 LGALS7P47929 136 aa0.63□□□□□ -2.31
CBWD1-216ENST00000489272 OR12D2P58182 307 aa0.63□□□□□ -2.31
CBWD1-216ENST00000489272 PLP1P60201 277 aa0.63□□□□□ -2.31
CBWD1-216ENST00000489272 CUL2Q13617 745 aa0.63□□□□□ -2.31
CBWD1-216ENST00000489272 CT45A1Q5HYN5 189 aa0.63□□□□□ -2.31
CBWD1-216ENST00000489272 PMF1Q6P1K2 205 aa0.63□□□□□ -2.31
CBWD1-216ENST00000489272 Q6ZSR3 168 aa0.63□□□□□ -2.31
CBWD1-216ENST00000489272 BBS7Q8IWZ6 715 aa0.63□□□□□ -2.31
CBWD1-216ENST00000489272 SLC25A29Q8N8R3 303 aa0.63□□□□□ -2.31
CBWD1-216ENST00000489272 SPATA4Q8NEY3 305 aa0.63□□□□□ -2.31
CBWD1-216ENST00000489272 OR6Q1Q8NGQ2 317 aa0.63□□□□□ -2.31
CBWD1-216ENST00000489272 CT45A3Q8NHU0 189 aa0.63□□□□□ -2.31
CBWD1-216ENST00000489272 OR51E1Q8TCB6 317 aa0.63□□□□□ -2.31
CBWD1-216ENST00000489272 RXFP4Q8TDU9 374 aa0.63□□□□□ -2.31
CBWD1-216ENST00000489272 ROPN1BQ9BZX4 212 aaPredicted RBP0.63□□□□□ -2.31
CBWD1-216ENST00000489272 VSIRQ9H7M9 311 aa0.63□□□□□ -2.31
CBWD1-216ENST00000489272 HRASLS2Q9NWW9 162 aa0.63□□□□□ -2.31
CBWD1-216ENST00000489272 AP1M2Q9Y6Q5 423 aa0.63□□□□□ -2.31
CBWD1-216ENST00000489272 CR1P17927 2039 aa0.63□□□□□ -2.31
CBWD1-216ENST00000489272 AKNAQ7Z591 1439 aa0.63□□□□□ -2.31
CBWD1-216ENST00000489272 C15orf38-AP3S2A0A0A6YYH1 394 aa0.62□□□□□ -2.31
CBWD1-216ENST00000489272 MYBPHLA2RUH7 354 aa0.62□□□□□ -2.31
CBWD1-216ENST00000489272 ISPDA4D126 451 aa0.62□□□□□ -2.31
CBWD1-216ENST00000489272 IZUMO1RA6ND01 250 aa0.62□□□□□ -2.31
CBWD1-216ENST00000489272 GMFGO60234 142 aa0.62□□□□□ -2.31
CBWD1-216ENST00000489272 TROVE2P10155 538 aaKnown RBP eCLIP0.62□□□□□ -2.31
CBWD1-216ENST00000489272 ZNF43P17038 809 aa0.62□□□□□ -2.31
CBWD1-216ENST00000489272 CD70P32970 193 aa0.62□□□□□ -2.31
CBWD1-216ENST00000489272 PCK1P35558 622 aa0.62□□□□□ -2.31
CBWD1-216ENST00000489272 TPMTP51580 245 aa0.62□□□□□ -2.31
CBWD1-216ENST00000489272 NDUFA8P51970 172 aa0.62□□□□□ -2.31
CBWD1-216ENST00000489272 POLR2FP61218 127 aaKnown RBP0.62□□□□□ -2.31
CBWD1-216ENST00000489272 SP4Q02446 784 aa0.62□□□□□ -2.31
CBWD1-216ENST00000489272 VPS26BQ4G0F5 336 aa0.62□□□□□ -2.31
CBWD1-216ENST00000489272 CTSL3PQ5NE16 218 aa0.62□□□□□ -2.31
CBWD1-216ENST00000489272 FA2HQ7L5A8 372 aa0.62□□□□□ -2.31
CBWD1-216ENST00000489272 EIF4E3Q8N5X7 224 aaKnown RBP0.62□□□□□ -2.31
CBWD1-216ENST00000489272 ZNF606Q8WXB4 792 aa0.62□□□□□ -2.31
CBWD1-216ENST00000489272 ZNF75AQ96N20 296 aa0.62□□□□□ -2.31
CBWD1-216ENST00000489272 SLC29A1Q99808 456 aa0.62□□□□□ -2.31
CBWD1-216ENST00000489272 HIGD2AQ9BW72 106 aa0.62□□□□□ -2.31
CBWD1-216ENST00000489272 METTL7AQ9H8H3 244 aa0.62□□□□□ -2.31
CBWD1-216ENST00000489272 UXTQ9UBK9 157 aaPredicted RBP0.62□□□□□ -2.31
CBWD1-216ENST00000489272 PCDH11XQ9BZA7 1347 aa0.62□□□□□ -2.31
CBWD1-216ENST00000489272 RAB29O14966 203 aa0.61□□□□□ -2.31
CBWD1-216ENST00000489272 B3GALNT1O75752 331 aa0.61□□□□□ -2.31
CBWD1-216ENST00000489272 ZNF708P17019 499 aa0.61□□□□□ -2.31
CBWD1-216ENST00000489272 PRPS1L1P21108 318 aa0.61□□□□□ -2.31
CBWD1-216ENST00000489272 NAA10P41227 235 aaPredicted RBP0.61□□□□□ -2.31
CBWD1-216ENST00000489272 LIPEQ05469 1076 aa0.61□□□□□ -2.31
CBWD1-216ENST00000489272 TMPRSS11AQ6ZMR5 421 aa0.61□□□□□ -2.31
CBWD1-216ENST00000489272 DRAM1Q8N682 238 aa0.61□□□□□ -2.31
CBWD1-216ENST00000489272 DEFB119Q8N690 84 aa0.61□□□□□ -2.31
CBWD1-216ENST00000489272 SNX31Q8N9S9 440 aa0.61□□□□□ -2.31
CBWD1-216ENST00000489272 UBAC2Q8NBM4 344 aa0.61□□□□□ -2.31
CBWD1-216ENST00000489272 OR8K3Q8NH51 312 aa0.61□□□□□ -2.31
CBWD1-216ENST00000489272 SYAP1Q96A49 352 aaPredicted RBP0.61□□□□□ -2.31
CBWD1-216ENST00000489272 RERGQ96A58 199 aaPredicted RBP0.61□□□□□ -2.31
CBWD1-216ENST00000489272 NRBF2Q96F24 287 aa0.61□□□□□ -2.31
CBWD1-216ENST00000489272 ERP44Q9BS26 406 aa0.61□□□□□ -2.31
CBWD1-216ENST00000489272 PLEKHF2Q9H8W4 249 aa0.61□□□□□ -2.31
CBWD1-216ENST00000489272 RETNQ9HD89 108 aa0.61□□□□□ -2.31
CBWD1-216ENST00000489272 CLEC4AQ9UMR7 237 aa0.61□□□□□ -2.31
CBWD1-216ENST00000489272 FHOD3Q2V2M9 1422 aa0.61□□□□□ -2.31
CBWD1-216ENST00000489272 IGKV1D-43A0A0B4J1Z2 117 aa0.6□□□□□ -2.31
CBWD1-216ENST00000489272 IGKV2-29A2NJV5 120 aaPredicted RBP0.6□□□□□ -2.31
CBWD1-216ENST00000489272 GGTLC3B5MD39 225 aa0.6□□□□□ -2.31
CBWD1-216ENST00000489272 H3BQ85 93 aa0.6□□□□□ -2.31
CBWD1-216ENST00000489272 M0R1X1 148 aa0.6□□□□□ -2.31
CBWD1-216ENST00000489272 NMT2O60551 498 aa0.6□□□□□ -2.31
CBWD1-216ENST00000489272 RAD1O60671 282 aa0.6□□□□□ -2.31
CBWD1-216ENST00000489272 TSPAN13O95857 204 aa0.6□□□□□ -2.31
CBWD1-216ENST00000489272 ANGP03950 147 aaKnown RBP0.6□□□□□ -2.31
CBWD1-216ENST00000489272 SERPINE2P07093 398 aa0.6□□□□□ -2.31
CBWD1-216ENST00000489272 OR1G1P47890 313 aa0.6□□□□□ -2.31
CBWD1-216ENST00000489272 BST2Q10589 180 aaKnown RBP0.6□□□□□ -2.31
CBWD1-216ENST00000489272 NAB1Q13506 487 aa0.6□□□□□ -2.31
CBWD1-216ENST00000489272 DDX39BQ13838 428 aaKnown RBP0.6□□□□□ -2.31
CBWD1-216ENST00000489272 LGALSLQ3ZCW2 172 aaPredicted RBP0.6□□□□□ -2.31
CBWD1-216ENST00000489272 KCTD16Q68DU8 428 aa0.6□□□□□ -2.31
CBWD1-216ENST00000489272 CERS6Q6ZMG9 384 aa0.6□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms