RNA–Protein interactions for RNA: ENST00000487615.5

TRA2B-214, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 4,485 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-214ENST00000487615 MPLP40238 635 aa10.53□□□□□ -0.72
TRA2B-214ENST00000487615 RAC1P63000 192 aa10.53□□□□□ -0.72
TRA2B-214ENST00000487615 IKZF1Q13422 519 aa10.53□□□□□ -0.72
TRA2B-214ENST00000487615 EXOSC2Q13868 293 aaKnown RBP10.53□□□□□ -0.72
TRA2B-214ENST00000487615 ZBTB37Q5TC79 503 aa10.53□□□□□ -0.72
TRA2B-214ENST00000487615 ASB5Q8WWX0 329 aa10.53□□□□□ -0.72
TRA2B-214ENST00000487615 ARPC5LQ9BPX5 153 aa10.53□□□□□ -0.72
TRA2B-214ENST00000487615 MICU1Q9BPX6 476 aa10.53□□□□□ -0.72
TRA2B-214ENST00000487615 P4HTMQ9NXG6 502 aa10.53□□□□□ -0.72
TRA2B-214ENST00000487615 SLCO1B1Q9Y6L6 691 aa10.53□□□□□ -0.72
TRA2B-214ENST00000487615 WNT11O96014 354 aa10.53□□□□□ -0.72
TRA2B-214ENST00000487615 CLPPQ16740 277 aaPredicted RBP10.53□□□□□ -0.72
TRA2B-214ENST00000487615 RP1P56715 2156 aa10.53□□□□□ -0.72
TRA2B-214ENST00000487615 OR5H14A6NHG9 310 aa10.53□□□□□ -0.72
TRA2B-214ENST00000487615 OR8U9P0C7N5 309 aa10.53□□□□□ -0.72
TRA2B-214ENST00000487615 CAMLGP49069 296 aa10.53□□□□□ -0.72
TRA2B-214ENST00000487615 LUMP51884 338 aaPredicted RBP10.53□□□□□ -0.72
TRA2B-214ENST00000487615 KLF9Q13886 244 aaPredicted RBP10.53□□□□□ -0.72
TRA2B-214ENST00000487615 CEACAM16Q2WEN9 425 aa10.53□□□□□ -0.72
TRA2B-214ENST00000487615 WIPI1Q5MNZ9 446 aaPredicted RBP10.53□□□□□ -0.72
TRA2B-214ENST00000487615 PMS2CLQ68D20 193 aa10.53□□□□□ -0.72
TRA2B-214ENST00000487615 BOLLQ8N9W6 283 aaKnown RBP10.53□□□□□ -0.72
TRA2B-214ENST00000487615 OR52N4Q8NGI2 321 aa10.53□□□□□ -0.72
TRA2B-214ENST00000487615 SCGB1C1Q8TD33 95 aa10.53□□□□□ -0.72
TRA2B-214ENST00000487615 MED30Q96HR3 178 aa10.53□□□□□ -0.72
TRA2B-214ENST00000487615 REEP6Q96HR9 211 aa10.53□□□□□ -0.72
TRA2B-214ENST00000487615 DLL4Q9NR61 685 aa10.53□□□□□ -0.72
TRA2B-214ENST00000487615 KLF13Q9Y2Y9 288 aaPredicted RBP10.53□□□□□ -0.72
TRA2B-214ENST00000487615 SHISA3A0PJX4 238 aa10.52□□□□□ -0.72
TRA2B-214ENST00000487615 OR2M5A3KFT3 312 aa10.52□□□□□ -0.72
TRA2B-214ENST00000487615 OR6C65A6NJZ3 312 aa10.52□□□□□ -0.72
TRA2B-214ENST00000487615 SDCBPO00560 298 aaPredicted RBP10.52□□□□□ -0.72
TRA2B-214ENST00000487615 BET1O15155 118 aa10.52□□□□□ -0.72
TRA2B-214ENST00000487615 FADS1O60427 444 aa10.52□□□□□ -0.72
TRA2B-214ENST00000487615 NRASP01111 189 aa10.52□□□□□ -0.72
TRA2B-214ENST00000487615 IFNA5P01569 189 aa10.52□□□□□ -0.72
TRA2B-214ENST00000487615 RAB6AP20340 208 aa10.52□□□□□ -0.72
TRA2B-214ENST00000487615 RPS4XP62701 263 aaKnown RBP10.52□□□□□ -0.72
TRA2B-214ENST00000487615 STK11Q15831 433 aa10.52□□□□□ -0.72
TRA2B-214ENST00000487615 IAH1Q2TAA2 248 aaPredicted RBP10.52□□□□□ -0.72
TRA2B-214ENST00000487615 LIX1LQ8IVB5 337 aa10.52□□□□□ -0.72
TRA2B-214ENST00000487615 PRR18Q8N4B5 295 aa10.52□□□□□ -0.72
TRA2B-214ENST00000487615 FAM181AQ8N9Y4 354 aa10.52□□□□□ -0.72
TRA2B-214ENST00000487615 MARCH1Q8TCQ1 289 aa10.52□□□□□ -0.72
TRA2B-214ENST00000487615 PAQR8Q8TEZ7 354 aa10.52□□□□□ -0.72
TRA2B-214ENST00000487615 IL1F10Q8WWZ1 152 aa10.52□□□□□ -0.72
TRA2B-214ENST00000487615 CPNE4Q96A23 557 aaPredicted RBP10.52□□□□□ -0.72
TRA2B-214ENST00000487615 ZNF416Q9BWM5 594 aa10.52□□□□□ -0.72
TRA2B-214ENST00000487615 CRLF2Q9HC73 371 aa10.52□□□□□ -0.72
TRA2B-214ENST00000487615 NECAP2Q9NVZ3 263 aa10.52□□□□□ -0.72
TRA2B-214ENST00000487615 A0A0B4J2A0 478 aa10.52□□□□□ -0.73
TRA2B-214ENST00000487615 C4orf47A7E2U8 309 aa10.52□□□□□ -0.73
TRA2B-214ENST00000487615 VSTM5A8MXK1 200 aa10.52□□□□□ -0.73
TRA2B-214ENST00000487615 KRBOX1C9JBD0 128 aa10.52□□□□□ -0.73
TRA2B-214ENST00000487615 F8W036 122 aa10.52□□□□□ -0.73
TRA2B-214ENST00000487615 K7EPK0 472 aa10.52□□□□□ -0.73
TRA2B-214ENST00000487615 IL32P24001 234 aa10.52□□□□□ -0.73
TRA2B-214ENST00000487615 RFC3P40938 356 aa10.52□□□□□ -0.73
TRA2B-214ENST00000487615 RGS19P49795 217 aa10.52□□□□□ -0.73
TRA2B-214ENST00000487615 BLOC1S1P78537 153 aa10.52□□□□□ -0.73
TRA2B-214ENST00000487615 TAF9Q16594 264 aa10.52□□□□□ -0.73
TRA2B-214ENST00000487615 ACER2Q5QJU3 275 aa10.52□□□□□ -0.73
TRA2B-214ENST00000487615 LINC01590Q5TEZ4 76 aa10.52□□□□□ -0.73
TRA2B-214ENST00000487615 TEX261Q6UWH6 196 aa10.52□□□□□ -0.73
TRA2B-214ENST00000487615 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.52□□□□□ -0.73
TRA2B-214ENST00000487615 FAM71E2Q8N5Q1 922 aa10.52□□□□□ -0.73
TRA2B-214ENST00000487615 SLC38A9Q8NBW4 561 aa10.52□□□□□ -0.73
TRA2B-214ENST00000487615 ASB13Q8WXK3 278 aa10.52□□□□□ -0.73
TRA2B-214ENST00000487615 FAM131CQ96AQ9 280 aa10.52□□□□□ -0.73
TRA2B-214ENST00000487615 KCNK15Q9H427 330 aa10.52□□□□□ -0.73
TRA2B-214ENST00000487615 CNTD2Q9H8S5 307 aa10.52□□□□□ -0.73
TRA2B-214ENST00000487615 WDR54Q9H977 334 aa10.52□□□□□ -0.73
TRA2B-214ENST00000487615 SHPKQ9UHJ6 478 aa10.52□□□□□ -0.73
TRA2B-214ENST00000487615 U3KQ87 197 aa10.52□□□□□ -0.73
TRA2B-214ENST00000487615 OR6C6A6NF89 314 aa10.52□□□□□ -0.73
TRA2B-214ENST00000487615 MMP16P51512 607 aa10.52□□□□□ -0.73
TRA2B-214ENST00000487615 LYG2Q86SG7 212 aa10.52□□□□□ -0.73
TRA2B-214ENST00000487615 SCMH1Q96GD3 660 aa10.52□□□□□ -0.73
TRA2B-214ENST00000487615 FOXB1Q99853 325 aa10.52□□□□□ -0.73
TRA2B-214ENST00000487615 SMIM3Q9BZL3 60 aa10.52□□□□□ -0.73
TRA2B-214ENST00000487615 EIF5A2Q9GZV4 153 aaKnown RBP10.52□□□□□ -0.73
TRA2B-214ENST00000487615 PLXNA4Q9HCM2 1894 aa10.52□□□□□ -0.73
TRA2B-214ENST00000487615 RGS13O14921 159 aa10.52□□□□□ -0.73
TRA2B-214ENST00000487615 OR2F2O95006 317 aa10.52□□□□□ -0.73
TRA2B-214ENST00000487615 GCH1P30793 250 aa10.52□□□□□ -0.73
TRA2B-214ENST00000487615 OR2F1Q13607 317 aa10.52□□□□□ -0.73
TRA2B-214ENST00000487615 OR2W3Q7Z3T1 314 aa10.52□□□□□ -0.73
TRA2B-214ENST00000487615 ZSCAN1Q8NBB4 408 aa10.52□□□□□ -0.73
TRA2B-214ENST00000487615 OR9K2Q8NGE7 335 aa10.52□□□□□ -0.73
TRA2B-214ENST00000487615 RNF133Q8WVZ7 376 aa10.52□□□□□ -0.73
TRA2B-214ENST00000487615 TGIF2Q9GZN2 237 aa10.52□□□□□ -0.73
TRA2B-214ENST00000487615 SLC23A1Q9UHI7 598 aa10.52□□□□□ -0.73
TRA2B-214ENST00000487615 CACNA1EQ15878 2313 aa10.52□□□□□ -0.73
TRA2B-214ENST00000487615 XRCC2O43543 280 aa10.51□□□□□ -0.73
TRA2B-214ENST00000487615 UPK3AO75631 287 aa10.51□□□□□ -0.73
TRA2B-214ENST00000487615 CNOT4O95628 575 aaKnown RBP10.51□□□□□ -0.73
TRA2B-214ENST00000487615 TSPAN15O95858 294 aa10.51□□□□□ -0.73
TRA2B-214ENST00000487615 SRD5A2P31213 254 aa10.51□□□□□ -0.73
TRA2B-214ENST00000487615 KIR3DL2P43630 455 aa10.51□□□□□ -0.73
TRA2B-214ENST00000487615 PNLIPRP3Q17RR3 467 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms