RNA–Protein interactions for RNA: ENST00000487160.1

PRPF38A-203, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 2

Gene PRPF38A, Length 926 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-203ENST00000487160 RPF2Q9H7B2 306 aaKnown RBP3.27□□□□□ -1.89
PRPF38A-203ENST00000487160 GEMIN7Q9H840 131 aaKnown RBP3.27□□□□□ -1.89
PRPF38A-203ENST00000487160 ZNF226Q9NYT6 803 aa3.27□□□□□ -1.89
PRPF38A-203ENST00000487160 ING4Q9UNL4 249 aa3.27□□□□□ -1.89
PRPF38A-203ENST00000487160 HES2Q9Y543 173 aa3.27□□□□□ -1.89
PRPF38A-203ENST00000487160 ACACAQ13085 2346 aa3.27□□□□□ -1.89
PRPF38A-203ENST00000487160 CACNA1EQ15878 2313 aa3.27□□□□□ -1.89
PRPF38A-203ENST00000487160 MYH10P35580 1976 aa3.27□□□□□ -1.89
PRPF38A-203ENST00000487160 APC2O95996 2303 aa3.26□□□□□ -1.89
PRPF38A-203ENST00000487160 TEX15Q9BXT5 2789 aa3.26□□□□□ -1.89
PRPF38A-203ENST00000487160 A0A0B4J2A0 478 aa3.26□□□□□ -1.89
PRPF38A-203ENST00000487160 IGKV6-21A0A0C4DH24 114 aa3.26□□□□□ -1.89
PRPF38A-203ENST00000487160 MYBPHLA2RUH7 354 aa3.26□□□□□ -1.89
PRPF38A-203ENST00000487160 NKX2-6A6NCS4 301 aa3.26□□□□□ -1.89
PRPF38A-203ENST00000487160 J3QKU1 62 aa3.26□□□□□ -1.89
PRPF38A-203ENST00000487160 WRBO00258 174 aa3.26□□□□□ -1.89
PRPF38A-203ENST00000487160 CDC7O00311 574 aa3.26□□□□□ -1.89
PRPF38A-203ENST00000487160 CHMP2AO43633 222 aa3.26□□□□□ -1.89
PRPF38A-203ENST00000487160 SUPT3HO75486 399 aa3.26□□□□□ -1.89
PRPF38A-203ENST00000487160 CLPXO76031 633 aa3.26□□□□□ -1.89
PRPF38A-203ENST00000487160 H6PDO95479 791 aa3.26□□□□□ -1.89
PRPF38A-203ENST00000487160 C6orf47O95873 294 aa3.26□□□□□ -1.89
PRPF38A-203ENST00000487160 ZNF30P17039 623 aa3.26□□□□□ -1.89
PRPF38A-203ENST00000487160 MDKP21741 143 aaPredicted RBP3.26□□□□□ -1.89
PRPF38A-203ENST00000487160 TUBG1P23258 451 aa3.26□□□□□ -1.89
PRPF38A-203ENST00000487160 AK4P27144 223 aaPredicted RBP3.26□□□□□ -1.89
PRPF38A-203ENST00000487160 RPS5P46782 204 aaKnown RBP3.26□□□□□ -1.89
PRPF38A-203ENST00000487160 CCR6P51684 374 aa3.26□□□□□ -1.89
PRPF38A-203ENST00000487160 NCBP2P52298 156 aaKnown RBP eCLIP3.26□□□□□ -1.89
PRPF38A-203ENST00000487160 RGS8P57771 180 aaPredicted RBP3.26□□□□□ -1.89
PRPF38A-203ENST00000487160 NUTF2P61970 127 aaKnown RBP3.26□□□□□ -1.89
PRPF38A-203ENST00000487160 SMARCB1Q12824 385 aa3.26□□□□□ -1.89
PRPF38A-203ENST00000487160 TRDNQ13061 729 aa3.26□□□□□ -1.89
PRPF38A-203ENST00000487160 MAB21L1Q13394 359 aa3.26□□□□□ -1.89
PRPF38A-203ENST00000487160 CHRNA6Q15825 494 aa3.26□□□□□ -1.89
PRPF38A-203ENST00000487160 TMEM183BQ1AE95 376 aa3.26□□□□□ -1.89
PRPF38A-203ENST00000487160 RSPO1Q2MKA7 263 aaPredicted RBP3.26□□□□□ -1.89
PRPF38A-203ENST00000487160 SOHLH1Q5JUK2 328 aa3.26□□□□□ -1.89
PRPF38A-203ENST00000487160 C9orf135Q5VTT2 229 aa3.26□□□□□ -1.89
PRPF38A-203ENST00000487160 CYB5R2Q6BCY4 276 aa3.26□□□□□ -1.89
PRPF38A-203ENST00000487160 BZW1Q7L1Q6 419 aaKnown RBP3.26□□□□□ -1.89
PRPF38A-203ENST00000487160 CENPQQ7L2Z9 268 aaPredicted RBP3.26□□□□□ -1.89
PRPF38A-203ENST00000487160 PEX26Q7Z412 305 aa3.26□□□□□ -1.89
PRPF38A-203ENST00000487160 CAMK2N1Q7Z7J9 78 aa3.26□□□□□ -1.89
PRPF38A-203ENST00000487160 TMEM183AQ8IXX5 376 aa3.26□□□□□ -1.89
PRPF38A-203ENST00000487160 OR4C5Q8NGB2 326 aa3.26□□□□□ -1.89
PRPF38A-203ENST00000487160 OR51G1Q8NGK1 321 aa3.26□□□□□ -1.89
PRPF38A-203ENST00000487160 ZNF502Q8TBZ5 544 aa3.26□□□□□ -1.89
PRPF38A-203ENST00000487160 NRGNQ92686 78 aa3.26□□□□□ -1.89
PRPF38A-203ENST00000487160 MCUR1Q96AQ8 359 aa3.26□□□□□ -1.89
PRPF38A-203ENST00000487160 ASB9Q96DX5 294 aa3.26□□□□□ -1.89
PRPF38A-203ENST00000487160 PIK3IP1Q96FE7 263 aa3.26□□□□□ -1.89
PRPF38A-203ENST00000487160 CPB2Q96IY4 423 aa3.26□□□□□ -1.89
PRPF38A-203ENST00000487160 P2RX4Q99571 388 aa3.26□□□□□ -1.89
PRPF38A-203ENST00000487160 CDC42EP4Q9H3Q1 356 aaKnown RBP3.26□□□□□ -1.89
PRPF38A-203ENST00000487160 C8orf33Q9H7E9 229 aaPredicted RBP3.26□□□□□ -1.89
PRPF38A-203ENST00000487160 AUNIPQ9H7T9 357 aa3.26□□□□□ -1.89
PRPF38A-203ENST00000487160 ZNF331Q9NQX6 463 aaPredicted RBP3.26□□□□□ -1.89
PRPF38A-203ENST00000487160 TUBG2Q9NRH3 451 aa3.26□□□□□ -1.89
PRPF38A-203ENST00000487160 NRBP2Q9NSY0 501 aa3.26□□□□□ -1.89
PRPF38A-203ENST00000487160 PTTG3PQ9NZH4 202 aa3.26□□□□□ -1.89
PRPF38A-203ENST00000487160 STOX2Q9P2F5 926 aaPredicted RBP3.26□□□□□ -1.89
PRPF38A-203ENST00000487160 SHPKQ9UHJ6 478 aa3.26□□□□□ -1.89
PRPF38A-203ENST00000487160 MGAQ8IWI9 3026 aa3.26□□□□□ -1.89
PRPF38A-203ENST00000487160 PTPN13Q12923 2485 aa3.25□□□□□ -1.89
PRPF38A-203ENST00000487160 TRBV6-6A0A0A6YYG2 114 aa3.25□□□□□ -1.89
PRPF38A-203ENST00000487160 ARPC4-TTLL3A0A0A6YYG9 625 aa3.25□□□□□ -1.89
PRPF38A-203ENST00000487160 ZNF816-ZNF321PA0A0X1KG74 233 aa3.25□□□□□ -1.89
PRPF38A-203ENST00000487160 CIB4A0PJX0 185 aa3.25□□□□□ -1.89
PRPF38A-203ENST00000487160 PES1O00541 588 aaKnown RBP3.25□□□□□ -1.89
PRPF38A-203ENST00000487160 UTS2O95399 124 aa3.25□□□□□ -1.89
PRPF38A-203ENST00000487160 IGLV2-23P01705 113 aa3.25□□□□□ -1.89
PRPF38A-203ENST00000487160 SMIM10L1P0DMW3 83 aa3.25□□□□□ -1.89
PRPF38A-203ENST00000487160 CALM1P0DP23 149 aa3.25□□□□□ -1.89
PRPF38A-203ENST00000487160 CALM2P0DP24 149 aa3.25□□□□□ -1.89
PRPF38A-203ENST00000487160 CALM3P0DP25 149 aa3.25□□□□□ -1.89
PRPF38A-203ENST00000487160 ZNF250P15622 560 aa3.25□□□□□ -1.89
PRPF38A-203ENST00000487160 BCKDHBP21953 392 aa3.25□□□□□ -1.89
PRPF38A-203ENST00000487160 RRM2P31350 389 aa3.25□□□□□ -1.89
PRPF38A-203ENST00000487160 OTX1P32242 354 aaPredicted RBP3.25□□□□□ -1.89
PRPF38A-203ENST00000487160 FOXN2P32314 431 aa3.25□□□□□ -1.89
PRPF38A-203ENST00000487160 AQP2P41181 271 aa3.25□□□□□ -1.89
PRPF38A-203ENST00000487160 EIF3EP60228 445 aaKnown RBP3.25□□□□□ -1.89
PRPF38A-203ENST00000487160 HADHQ16836 314 aaKnown RBP3.25□□□□□ -1.89
PRPF38A-203ENST00000487160 ZNF658BQ4V348 819 aaPredicted RBP3.25□□□□□ -1.89
PRPF38A-203ENST00000487160 REEP3Q6NUK4 255 aa3.25□□□□□ -1.89
PRPF38A-203ENST00000487160 IGFL2Q6UWQ7 119 aa3.25□□□□□ -1.89
PRPF38A-203ENST00000487160 CERS6Q6ZMG9 384 aa3.25□□□□□ -1.89
PRPF38A-203ENST00000487160 H2AFVQ71UI9 128 aa3.25□□□□□ -1.89
PRPF38A-203ENST00000487160 SLC16A14Q7RTX9 510 aa3.25□□□□□ -1.89
PRPF38A-203ENST00000487160 LUZP2Q86TE4 346 aa3.25□□□□□ -1.89
PRPF38A-203ENST00000487160 MMAAQ8IVH4 418 aaKnown RBP3.25□□□□□ -1.89
PRPF38A-203ENST00000487160 MREGQ8N565 214 aa3.25□□□□□ -1.89
PRPF38A-203ENST00000487160 ZNF321PQ8N8H1 164 aa3.25□□□□□ -1.89
PRPF38A-203ENST00000487160 BBOF1Q8ND07 529 aa3.25□□□□□ -1.89
PRPF38A-203ENST00000487160 MDS2Q8NDY4 140 aa3.25□□□□□ -1.89
PRPF38A-203ENST00000487160 BPIFCQ8NFQ6 507 aa3.25□□□□□ -1.89
PRPF38A-203ENST00000487160 OR52K1Q8NGK4 314 aa3.25□□□□□ -1.89
PRPF38A-203ENST00000487160 OR4A4PQ8NGN8 299 aa3.25□□□□□ -1.89
PRPF38A-203ENST00000487160 OR10R2Q8NGX6 335 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms