RNA–Protein interactions for RNA: ENST00000483941.1

SMAD9-204, Transcript of SMAD family member 9, humanhuman

TSL 3

Gene SMAD9, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-204ENST00000483941 VBP1P61758 197 aa12.13□□□□□ -0.47
SMAD9-204ENST00000483941 LSM3P62310 102 aaKnown RBP12.13□□□□□ -0.47
SMAD9-204ENST00000483941 DOC2BQ14184 412 aa12.13□□□□□ -0.47
SMAD9-204ENST00000483941 PPA1Q15181 289 aa12.13□□□□□ -0.47
SMAD9-204ENST00000483941 DGUOKQ16854 277 aa12.13□□□□□ -0.47
SMAD9-204ENST00000483941 RSPO1Q2MKA7 263 aaPredicted RBP12.13□□□□□ -0.47
SMAD9-204ENST00000483941 HSD17B12Q53GQ0 312 aa12.13□□□□□ -0.47
SMAD9-204ENST00000483941 FOXB2Q5VYV0 432 aa12.13□□□□□ -0.47
SMAD9-204ENST00000483941 C22orf42Q6IC83 251 aa12.13□□□□□ -0.47
SMAD9-204ENST00000483941 ZNF808Q8N4W9 903 aaPredicted RBP12.13□□□□□ -0.47
SMAD9-204ENST00000483941 WDR31Q8NA23 367 aa12.13□□□□□ -0.47
SMAD9-204ENST00000483941 CA5BP1Q8WTZ4 195 aa12.13□□□□□ -0.47
SMAD9-204ENST00000483941 POM121L2Q96KW2 1035 aa12.13□□□□□ -0.47
SMAD9-204ENST00000483941 CENPOQ9BU64 300 aa12.13□□□□□ -0.47
SMAD9-204ENST00000483941 C1QTNF5Q9BXJ0 243 aa12.13□□□□□ -0.47
SMAD9-204ENST00000483941 NAA50Q9GZZ1 169 aaKnown RBP12.13□□□□□ -0.47
SMAD9-204ENST00000483941 DCSTAMPQ9H295 470 aa12.13□□□□□ -0.47
SMAD9-204ENST00000483941 NEK6Q9HC98 313 aa12.13□□□□□ -0.47
SMAD9-204ENST00000483941 KCNJ16Q9NPI9 418 aa12.13□□□□□ -0.47
SMAD9-204ENST00000483941 TBCCD1Q9NVR7 557 aa12.13□□□□□ -0.47
SMAD9-204ENST00000483941 CRNNQ9UBG3 495 aaPredicted RBP12.13□□□□□ -0.47
SMAD9-204ENST00000483941 SPEF1Q9Y4P9 236 aa12.13□□□□□ -0.47
SMAD9-204ENST00000483941 N6AMT1Q9Y5N5 214 aa12.13□□□□□ -0.47
SMAD9-204ENST00000483941 SLC25A15Q9Y619 301 aa12.13□□□□□ -0.47
SMAD9-204ENST00000483941 INTS1Q8N201 2190 aaKnown RBP12.13□□□□□ -0.47
SMAD9-204ENST00000483941 LOC390937A0A1W2PQ73 354 aa12.12□□□□□ -0.47
SMAD9-204ENST00000483941 DBHP09172 617 aa12.12□□□□□ -0.47
SMAD9-204ENST00000483941 UCHL1P09936 223 aa12.12□□□□□ -0.47
SMAD9-204ENST00000483941 ZNF14P17017 642 aaPredicted RBP12.12□□□□□ -0.47
SMAD9-204ENST00000483941 CCL1P22362 96 aa12.12□□□□□ -0.47
SMAD9-204ENST00000483941 CCNOP22674 350 aa12.12□□□□□ -0.47
SMAD9-204ENST00000483941 NR4A1P22736 598 aa12.12□□□□□ -0.47
SMAD9-204ENST00000483941 PCSK6P29122 969 aa12.12□□□□□ -0.47
SMAD9-204ENST00000483941 SSTR2P30874 369 aa12.12□□□□□ -0.47
SMAD9-204ENST00000483941 NCS1P62166 190 aa12.12□□□□□ -0.47
SMAD9-204ENST00000483941 CNPY1Q3B7I2 92 aa12.12□□□□□ -0.47
SMAD9-204ENST00000483941 XKRXQ6PP77 449 aa12.12□□□□□ -0.47
SMAD9-204ENST00000483941 TMEM91Q6ZNR0 172 aa12.12□□□□□ -0.47
SMAD9-204ENST00000483941 PRSS45Q7RTY3 260 aa12.12□□□□□ -0.47
SMAD9-204ENST00000483941 RELL2Q8NC24 303 aaPredicted RBP12.12□□□□□ -0.47
SMAD9-204ENST00000483941 OR8B12Q8NGG6 310 aa12.12□□□□□ -0.47
SMAD9-204ENST00000483941 OR13C3Q8NGS6 347 aa12.12□□□□□ -0.47
SMAD9-204ENST00000483941 RPL3LQ92901 407 aaKnown RBP12.12□□□□□ -0.47
SMAD9-204ENST00000483941 RNASE6Q93091 150 aaKnown RBP12.12□□□□□ -0.47
SMAD9-204ENST00000483941 S100PBPQ96BU1 408 aa12.12□□□□□ -0.47
SMAD9-204ENST00000483941 CCDC120Q96HB5 630 aa12.12□□□□□ -0.47
SMAD9-204ENST00000483941 KCNS3Q9BQ31 491 aa12.12□□□□□ -0.47
SMAD9-204ENST00000483941 TCF7L1Q9HCS4 588 aa12.12□□□□□ -0.47
SMAD9-204ENST00000483941 SNTG1Q9NSN8 517 aa12.12□□□□□ -0.47
SMAD9-204ENST00000483941 PTTG2Q9NZH5 202 aa12.12□□□□□ -0.47
SMAD9-204ENST00000483941 NCOA6Q14686 2063 aaPredicted RBP12.11□□□□□ -0.47
SMAD9-204ENST00000483941 LOC100509620A0A075B734 347 aa12.11□□□□□ -0.47
SMAD9-204ENST00000483941 LOC107986453A0A1B0GWG9 222 aa12.11□□□□□ -0.47
SMAD9-204ENST00000483941 MEGF11A6BM72 1044 aa12.11□□□□□ -0.47
SMAD9-204ENST00000483941 P2RY10O00398 339 aa12.11□□□□□ -0.47
SMAD9-204ENST00000483941 CASKO14936 926 aa12.11□□□□□ -0.47
SMAD9-204ENST00000483941 ICMTO60725 284 aa12.11□□□□□ -0.47
SMAD9-204ENST00000483941 ATE1O95260 518 aa12.11□□□□□ -0.47
SMAD9-204ENST00000483941 IGLV1-44P01699 117 aa12.11□□□□□ -0.47
SMAD9-204ENST00000483941 ZNF20P17024 532 aa12.11□□□□□ -0.47
SMAD9-204ENST00000483941 CALRP27797 417 aaKnown RBP12.11□□□□□ -0.47
SMAD9-204ENST00000483941 RAD52P43351 418 aa12.11□□□□□ -0.47
SMAD9-204ENST00000483941 RORCP51449 518 aa12.11□□□□□ -0.47
SMAD9-204ENST00000483941 IDH3GP51553 393 aaPredicted RBP12.11□□□□□ -0.47
SMAD9-204ENST00000483941 RPS11P62280 158 aaKnown RBP eCLIP12.11□□□□□ -0.47
SMAD9-204ENST00000483941 SORDQ00796 357 aa12.11□□□□□ -0.47
SMAD9-204ENST00000483941 FAM27E3Q08E93 113 aa12.11□□□□□ -0.47
SMAD9-204ENST00000483941 ODF4Q2M2E3 257 aa12.11□□□□□ -0.47
SMAD9-204ENST00000483941 COLCA1Q6ZS62 124 aa12.11□□□□□ -0.47
SMAD9-204ENST00000483941 PGAP1Q75T13 922 aa12.11□□□□□ -0.47
SMAD9-204ENST00000483941 CDH24Q86UP0 819 aa12.11□□□□□ -0.47
SMAD9-204ENST00000483941 LIX1LQ8IVB5 337 aa12.11□□□□□ -0.47
SMAD9-204ENST00000483941 SERPINA12Q8IW75 414 aa12.11□□□□□ -0.47
SMAD9-204ENST00000483941 FTMTQ8N4E7 242 aa12.11□□□□□ -0.47
SMAD9-204ENST00000483941 OR5D14Q8NGL3 314 aa12.11□□□□□ -0.47
SMAD9-204ENST00000483941 OR51E1Q8TCB6 317 aa12.11□□□□□ -0.47
SMAD9-204ENST00000483941 SLC7A6Q92536 515 aa12.11□□□□□ -0.47
SMAD9-204ENST00000483941 AP3S1Q92572 193 aa12.11□□□□□ -0.47
SMAD9-204ENST00000483941 TMEM106AQ96A25 262 aa12.11□□□□□ -0.47
SMAD9-204ENST00000483941 ZNF75AQ96N20 296 aa12.11□□□□□ -0.47
SMAD9-204ENST00000483941 DERL3Q96Q80 235 aa12.11□□□□□ -0.47
SMAD9-204ENST00000483941 OR14A2Q96R54 314 aa12.11□□□□□ -0.47
SMAD9-204ENST00000483941 PLEKHA1Q9HB21 404 aa12.11□□□□□ -0.47
SMAD9-204ENST00000483941 GPR84Q9NQS5 396 aa12.11□□□□□ -0.47
SMAD9-204ENST00000483941 ZNF275Q9NSD4 429 aaPredicted RBP12.11□□□□□ -0.47
SMAD9-204ENST00000483941 NDRG3Q9UGV2 375 aa12.11□□□□□ -0.47
SMAD9-204ENST00000483941 FOXJ3Q9UPW0 622 aa12.11□□□□□ -0.47
SMAD9-204ENST00000483941 ANKHD1Q8IWZ3 2542 aaKnown RBP12.1□□□□□ -0.47
SMAD9-204ENST00000483941 FBN3Q75N90 2809 aa12.1□□□□□ -0.47
SMAD9-204ENST00000483941 ZNF503-AS2A6NEH8 195 aa12.1□□□□□ -0.47
SMAD9-204ENST00000483941 DHRS3O75911 302 aa12.1□□□□□ -0.47
SMAD9-204ENST00000483941 ERCC1P07992 297 aaPredicted RBP12.1□□□□□ -0.47
SMAD9-204ENST00000483941 SLC2A1P11166 492 aa12.1□□□□□ -0.47
SMAD9-204ENST00000483941 SRMP19623 302 aa12.1□□□□□ -0.47
SMAD9-204ENST00000483941 GNALP38405 381 aa12.1□□□□□ -0.47
SMAD9-204ENST00000483941 DDOSTP39656 456 aa12.1□□□□□ -0.47
SMAD9-204ENST00000483941 MAP2K3P46734 347 aa12.1□□□□□ -0.47
SMAD9-204ENST00000483941 PPP3R1P63098 170 aa12.1□□□□□ -0.47
SMAD9-204ENST00000483941 TSC22D1Q15714 1073 aa12.1□□□□□ -0.47
SMAD9-204ENST00000483941 ZBTB37Q5TC79 503 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms