RNA–Protein interactions for RNA: ENST00000479339.5

CNKSR3-204, Transcript of CNKSR family member 3, humanhuman

TSL 1 (best) BASIC

Gene CNKSR3, Length 2,023 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3-204ENST00000479339 SLC6A7Q99884 636 aa11.76□□□□□ -0.53
CNKSR3-204ENST00000479339 ACTR3CQ9C0K3 210 aaPredicted RBP11.76□□□□□ -0.53
CNKSR3-204ENST00000479339 MTHFD2LQ9H903 347 aaPredicted RBP11.76□□□□□ -0.53
CNKSR3-204ENST00000479339 RAB18Q9NP72 206 aa11.76□□□□□ -0.53
CNKSR3-204ENST00000479339 FAM212BQ9NTI7 297 aaPredicted RBP11.76□□□□□ -0.53
CNKSR3-204ENST00000479339 KCNE3Q9Y6H6 103 aa11.76□□□□□ -0.53
CNKSR3-204ENST00000479339 C13orf42A0A1B0GVH6 325 aa11.76□□□□□ -0.53
CNKSR3-204ENST00000479339 MSGN1A6NI15 193 aa11.76□□□□□ -0.53
CNKSR3-204ENST00000479339 DUXAA6NLW8 204 aa11.76□□□□□ -0.53
CNKSR3-204ENST00000479339 H0YIZ8 118 aa11.76□□□□□ -0.53
CNKSR3-204ENST00000479339 K7ESM1 405 aa11.76□□□□□ -0.53
CNKSR3-204ENST00000479339 RAB27BO00194 218 aa11.76□□□□□ -0.53
CNKSR3-204ENST00000479339 NDUFS4O43181 175 aa11.76□□□□□ -0.53
CNKSR3-204ENST00000479339 DLEU1O43261 78 aa11.76□□□□□ -0.53
CNKSR3-204ENST00000479339 ALOX12BO75342 701 aa11.76□□□□□ -0.53
CNKSR3-204ENST00000479339 JTBO76095 146 aa11.76□□□□□ -0.53
CNKSR3-204ENST00000479339 TBX6O95947 436 aaPredicted RBP11.76□□□□□ -0.53
CNKSR3-204ENST00000479339 FABP4P15090 132 aa11.76□□□□□ -0.53
CNKSR3-204ENST00000479339 SSPNQ14714 243 aa11.76□□□□□ -0.53
CNKSR3-204ENST00000479339 SLC9A5Q14940 896 aa11.76□□□□□ -0.53
CNKSR3-204ENST00000479339 ZNF684Q5T5D7 378 aa11.76□□□□□ -0.53
CNKSR3-204ENST00000479339 OPN5Q6U736 354 aa11.76□□□□□ -0.53
CNKSR3-204ENST00000479339 ZNF836Q6ZNA1 936 aa11.76□□□□□ -0.53
CNKSR3-204ENST00000479339 LFNGQ8NES3 379 aa11.76□□□□□ -0.53
CNKSR3-204ENST00000479339 OR9K2Q8NGE7 335 aa11.76□□□□□ -0.53
CNKSR3-204ENST00000479339 OR9A2Q8NGT5 310 aa11.76□□□□□ -0.53
CNKSR3-204ENST00000479339 FAM3DQ96BQ1 224 aa11.76□□□□□ -0.53
CNKSR3-204ENST00000479339 ZG16BQ96DA0 208 aa11.76□□□□□ -0.53
CNKSR3-204ENST00000479339 MVB12AQ96EY5 273 aa11.76□□□□□ -0.53
CNKSR3-204ENST00000479339 WDR92Q96MX6 357 aa11.76□□□□□ -0.53
CNKSR3-204ENST00000479339 AIF1LQ9BQI0 150 aa11.76□□□□□ -0.53
CNKSR3-204ENST00000479339 SCRT1Q9BWW7 348 aa11.76□□□□□ -0.53
CNKSR3-204ENST00000479339 MMACHCQ9Y4U1 282 aa11.76□□□□□ -0.53
CNKSR3-204ENST00000479339 EPG5Q9HCE0 2579 aa11.75□□□□□ -0.53
CNKSR3-204ENST00000479339 CEP295Q9C0D2 2601 aa11.75□□□□□ -0.53
CNKSR3-204ENST00000479339 LY6G6EA0A0G2JKS1 128 aa11.75□□□□□ -0.53
CNKSR3-204ENST00000479339 EREGO14944 169 aa11.75□□□□□ -0.53
CNKSR3-204ENST00000479339 KCNAB3O43448 404 aa11.75□□□□□ -0.53
CNKSR3-204ENST00000479339 CYTIPO60759 359 aa11.75□□□□□ -0.53
CNKSR3-204ENST00000479339 LYPD3O95274 346 aa11.75□□□□□ -0.53
CNKSR3-204ENST00000479339 GPANK1O95872 356 aa11.75□□□□□ -0.53
CNKSR3-204ENST00000479339 MAS1P04201 325 aa11.75□□□□□ -0.53
CNKSR3-204ENST00000479339 SNRPCP09234 159 aaKnown RBP11.75□□□□□ -0.53
CNKSR3-204ENST00000479339 F3P13726 295 aa11.75□□□□□ -0.53
CNKSR3-204ENST00000479339 ST6GAL1P15907 406 aa11.75□□□□□ -0.53
CNKSR3-204ENST00000479339 GABRR1P24046 479 aa11.75□□□□□ -0.53
CNKSR3-204ENST00000479339 MSX1P28360 303 aa11.75□□□□□ -0.53
CNKSR3-204ENST00000479339 DUSP3P51452 185 aaPredicted RBP11.75□□□□□ -0.53
CNKSR3-204ENST00000479339 SAPCD1Q5SSQ6 148 aa11.75□□□□□ -0.53
CNKSR3-204ENST00000479339 HES3Q5TGS1 186 aa11.75□□□□□ -0.53
CNKSR3-204ENST00000479339 LRRC18Q8N456 261 aa11.75□□□□□ -0.53
CNKSR3-204ENST00000479339 TRAM1L1Q8N609 369 aa11.75□□□□□ -0.53
CNKSR3-204ENST00000479339 OR52E2Q8NGJ4 325 aa11.75□□□□□ -0.53
CNKSR3-204ENST00000479339 CD300LFQ8TDQ1 290 aa11.75□□□□□ -0.53
CNKSR3-204ENST00000479339 CDS1Q92903 461 aa11.75□□□□□ -0.53
CNKSR3-204ENST00000479339 SLC22A18Q96BI1 424 aa11.75□□□□□ -0.53
CNKSR3-204ENST00000479339 BSCL2Q96G97 398 aaPredicted RBP11.75□□□□□ -0.53
CNKSR3-204ENST00000479339 C16orf58Q96GQ5 468 aa11.75□□□□□ -0.53
CNKSR3-204ENST00000479339 COMMD4Q9H0A8 199 aa11.75□□□□□ -0.53
CNKSR3-204ENST00000479339 U3KQA8 63 aa11.75□□□□□ -0.53
CNKSR3-204ENST00000479339 NUP210LQ5VU65 1888 aa11.74□□□□□ -0.53
CNKSR3-204ENST00000479339 USP24Q9UPU5 2620 aa11.74□□□□□ -0.53
CNKSR3-204ENST00000479339 M0QZK8 103 aa11.74□□□□□ -0.53
CNKSR3-204ENST00000479339 M0R143 59 aa11.74□□□□□ -0.53
CNKSR3-204ENST00000479339 EFSO43281 561 aa11.74□□□□□ -0.53
CNKSR3-204ENST00000479339 PRICKLE3O43900 615 aaPredicted RBP11.74□□□□□ -0.53
CNKSR3-204ENST00000479339 GGCTO75223 188 aaKnown RBP11.74□□□□□ -0.53
CNKSR3-204ENST00000479339 ZNF25P17030 456 aaPredicted RBP11.74□□□□□ -0.53
CNKSR3-204ENST00000479339 TBPP20226 339 aa11.74□□□□□ -0.53
CNKSR3-204ENST00000479339 RAB6AP20340 208 aa11.74□□□□□ -0.53
CNKSR3-204ENST00000479339 CD200P41217 278 aa11.74□□□□□ -0.53
CNKSR3-204ENST00000479339 BPIFB3P59826 476 aa11.74□□□□□ -0.53
CNKSR3-204ENST00000479339 INSM1Q01101 510 aaPredicted RBP11.74□□□□□ -0.53
CNKSR3-204ENST00000479339 C2orf76Q3KRA6 126 aa11.74□□□□□ -0.53
CNKSR3-204ENST00000479339 RPL7L1Q6DKI1 246 aaKnown RBP11.74□□□□□ -0.53
CNKSR3-204ENST00000479339 WDR88Q6ZMY6 472 aa11.74□□□□□ -0.53
CNKSR3-204ENST00000479339 LMX1AQ8TE12 382 aa11.74□□□□□ -0.53
CNKSR3-204ENST00000479339 CASTOR1Q8WTX7 329 aa11.74□□□□□ -0.53
CNKSR3-204ENST00000479339 APOOQ9BUR5 198 aa11.74□□□□□ -0.53
CNKSR3-204ENST00000479339 EIF5A2Q9GZV4 153 aaKnown RBP11.74□□□□□ -0.53
CNKSR3-204ENST00000479339 LAMP5Q9UJQ1 280 aa11.74□□□□□ -0.53
CNKSR3-204ENST00000479339 FARSAQ9Y285 508 aaKnown RBP11.74□□□□□ -0.53
CNKSR3-204ENST00000479339 ARID1BQ8NFD5 2236 aaPredicted RBP11.74□□□□□ -0.53
CNKSR3-204ENST00000479339 TRAV8-7A0A075B6U6 113 aa11.74□□□□□ -0.53
CNKSR3-204ENST00000479339 LOC100509620A0A075B734 347 aa11.74□□□□□ -0.53
CNKSR3-204ENST00000479339 TRAV27A0A087WT01 109 aa11.74□□□□□ -0.53
CNKSR3-204ENST00000479339 A0A0A6YYD5 115 aa11.74□□□□□ -0.53
CNKSR3-204ENST00000479339 TMEM212A6NML5 194 aa11.74□□□□□ -0.53
CNKSR3-204ENST00000479339 HSPB2A8KAH6 182 aa11.74□□□□□ -0.53
CNKSR3-204ENST00000479339 STK17BO94768 372 aa11.74□□□□□ -0.53
CNKSR3-204ENST00000479339 EDN3P14138 238 aa11.74□□□□□ -0.53
CNKSR3-204ENST00000479339 CXCR1P25024 350 aa11.74□□□□□ -0.53
CNKSR3-204ENST00000479339 SOX2P48431 317 aa11.74□□□□□ -0.53
CNKSR3-204ENST00000479339 CLDN6P56747 220 aa11.74□□□□□ -0.53
CNKSR3-204ENST00000479339 NFATC4Q14934 902 aa11.74□□□□□ -0.53
CNKSR3-204ENST00000479339 OR1Q1Q15612 314 aa11.74□□□□□ -0.53
CNKSR3-204ENST00000479339 HSPB2Q16082 182 aa11.74□□□□□ -0.53
CNKSR3-204ENST00000479339 MIDNQ504T8 468 aa11.74□□□□□ -0.53
CNKSR3-204ENST00000479339 DCAF10Q5QP82 559 aa11.74□□□□□ -0.53
CNKSR3-204ENST00000479339 GGNBP1Q5YKI7 109 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms