RNA–Protein interactions for RNA: ENST00000476379.5

CCDC39-204, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 4,451 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-204ENST00000476379 SDHAP31040 664 aa4.46□□□□□ -1.7
CCDC39-204ENST00000476379 CSF2RBP32927 897 aa4.46□□□□□ -1.7
CCDC39-204ENST00000476379 RPS10P46783 165 aaKnown RBP4.46□□□□□ -1.7
CCDC39-204ENST00000476379 MTCP1P56278 107 aa4.46□□□□□ -1.7
CCDC39-204ENST00000476379 BTG1P62324 171 aa4.46□□□□□ -1.7
CCDC39-204ENST00000476379 TRA2BP62995 288 aaKnown RBP4.46□□□□□ -1.7
CCDC39-204ENST00000476379 TGFBR3Q03167 851 aa4.46□□□□□ -1.7
CCDC39-204ENST00000476379 ZNF74Q16587 644 aa4.46□□□□□ -1.7
CCDC39-204ENST00000476379 CT45A2Q5DJT8 189 aa4.46□□□□□ -1.7
CCDC39-204ENST00000476379 TMEM201Q5SNT2 666 aa4.46□□□□□ -1.7
CCDC39-204ENST00000476379 DMKNQ6E0U4 476 aaPredicted RBP4.46□□□□□ -1.7
CCDC39-204ENST00000476379 LINC00696Q6ZRV3 163 aa4.46□□□□□ -1.7
CCDC39-204ENST00000476379 GKN2Q86XP6 184 aa4.46□□□□□ -1.7
CCDC39-204ENST00000476379 NECAP1Q8NC96 275 aa4.46□□□□□ -1.7
CCDC39-204ENST00000476379 OR14L1PQ8NHC6 308 aa4.46□□□□□ -1.7
CCDC39-204ENST00000476379 AKR7LQ8NHP1 331 aa4.46□□□□□ -1.7
CCDC39-204ENST00000476379 WDFY2Q96P53 400 aa4.46□□□□□ -1.7
CCDC39-204ENST00000476379 DHRS9Q9BPW9 319 aa4.46□□□□□ -1.7
CCDC39-204ENST00000476379 ZNF416Q9BWM5 594 aa4.46□□□□□ -1.7
CCDC39-204ENST00000476379 GHITMQ9H3K2 345 aa4.46□□□□□ -1.7
CCDC39-204ENST00000476379 RGCCQ9H4X1 137 aa4.46□□□□□ -1.7
CCDC39-204ENST00000476379 TAS2R5Q9NYW4 299 aa4.46□□□□□ -1.7
CCDC39-204ENST00000476379 SH3BGRL2Q9UJC5 107 aa4.46□□□□□ -1.7
CCDC39-204ENST00000476379 PURGQ9UJV8 347 aaKnown RBP4.46□□□□□ -1.7
CCDC39-204ENST00000476379 MRPS18BQ9Y676 258 aaKnown RBP4.46□□□□□ -1.7
CCDC39-204ENST00000476379 ADAMTS9Q9P2N4 1935 aa4.46□□□□□ -1.7
CCDC39-204ENST00000476379 PRAMEF26H0Y7S4 382 aa4.46□□□□□ -1.7
CCDC39-204ENST00000476379 CST7O76096 145 aa4.46□□□□□ -1.7
CCDC39-204ENST00000476379 CSF1P09603 554 aa4.46□□□□□ -1.7
CCDC39-204ENST00000476379 CFL1P23528 166 aaKnown RBP4.46□□□□□ -1.7
CCDC39-204ENST00000476379 ACAA2P42765 397 aaKnown RBP4.46□□□□□ -1.7
CCDC39-204ENST00000476379 KCNJ3P48549 501 aa4.46□□□□□ -1.7
CCDC39-204ENST00000476379 TAS2R19P59542 299 aa4.46□□□□□ -1.7
CCDC39-204ENST00000476379 PDZK1IP1Q13113 114 aa4.46□□□□□ -1.7
CCDC39-204ENST00000476379 ZNF529Q6P280 563 aa4.46□□□□□ -1.7
CCDC39-204ENST00000476379 FIP1L1Q6UN15 594 aaKnown RBP4.46□□□□□ -1.7
CCDC39-204ENST00000476379 PRSS42Q7Z5A4 293 aa4.46□□□□□ -1.7
CCDC39-204ENST00000476379 TMEM123Q8N131 208 aa4.46□□□□□ -1.7
CCDC39-204ENST00000476379 OR10G3Q8NGC4 313 aa4.46□□□□□ -1.7
CCDC39-204ENST00000476379 STT3BQ8TCJ2 826 aa4.46□□□□□ -1.7
CCDC39-204ENST00000476379 CCDC74AQ96AQ1 378 aa4.46□□□□□ -1.7
CCDC39-204ENST00000476379 ZDHHC12Q96GR4 267 aa4.46□□□□□ -1.7
CCDC39-204ENST00000476379 ARHGAP5-AS1Q96IT6 56 aa4.46□□□□□ -1.7
CCDC39-204ENST00000476379 AKR1E2Q96JD6 320 aa4.46□□□□□ -1.7
CCDC39-204ENST00000476379 C10orf90Q96M02 699 aa4.46□□□□□ -1.7
CCDC39-204ENST00000476379 C12orf49Q9H741 205 aa4.46□□□□□ -1.7
CCDC39-204ENST00000476379 CNTD2Q9H8S5 307 aa4.46□□□□□ -1.7
CCDC39-204ENST00000476379 ICAM5Q9UMF0 924 aa4.46□□□□□ -1.7
CCDC39-204ENST00000476379 ZNF175Q9Y473 711 aa4.46□□□□□ -1.7
CCDC39-204ENST00000476379 TACC2O95359 2948 aa4.46□□□□□ -1.7
CCDC39-204ENST00000476379 SVEP1Q4LDE5 3571 aa4.46□□□□□ -1.7
CCDC39-204ENST00000476379 LOC100289279A0A1B0GTE1 492 aa4.46□□□□□ -1.7
CCDC39-204ENST00000476379 RAB19A4D1S5 217 aa4.46□□□□□ -1.7
CCDC39-204ENST00000476379 OR6C76A6NM76 312 aa4.46□□□□□ -1.7
CCDC39-204ENST00000476379 MCRIP1C9JLW8 97 aa4.46□□□□□ -1.7
CCDC39-204ENST00000476379 LRP3O75074 770 aa4.46□□□□□ -1.7
CCDC39-204ENST00000476379 TSPAN15O95858 294 aa4.46□□□□□ -1.7
CCDC39-204ENST00000476379 ONECUT2O95948 504 aa4.46□□□□□ -1.7
CCDC39-204ENST00000476379 PRB4P10163 310 aaPredicted RBP4.46□□□□□ -1.7
CCDC39-204ENST00000476379 B4GALT1P15291 398 aa4.46□□□□□ -1.7
CCDC39-204ENST00000476379 ABCD3P28288 659 aa4.46□□□□□ -1.7
CCDC39-204ENST00000476379 MFAP5Q13361 173 aa4.46□□□□□ -1.7
CCDC39-204ENST00000476379 SPINK9Q5DT21 86 aa4.46□□□□□ -1.7
CCDC39-204ENST00000476379 ZNF425Q6IV72 752 aa4.46□□□□□ -1.7
CCDC39-204ENST00000476379 CSPG4Q6UVK1 2322 aa4.46□□□□□ -1.7
CCDC39-204ENST00000476379 SLC16A9Q7RTY1 509 aa4.46□□□□□ -1.7
CCDC39-204ENST00000476379 BMPERQ8N8U9 685 aa4.46□□□□□ -1.7
CCDC39-204ENST00000476379 OR14K1Q8NGZ2 314 aa4.46□□□□□ -1.7
CCDC39-204ENST00000476379 EDAQ92838 391 aa4.46□□□□□ -1.7
CCDC39-204ENST00000476379 KISS1RQ969F8 398 aaPredicted RBP4.46□□□□□ -1.7
CCDC39-204ENST00000476379 SLAMF6Q96DU3 332 aa4.46□□□□□ -1.7
CCDC39-204ENST00000476379 LINC00615Q96LM1 132 aaPredicted RBP4.46□□□□□ -1.7
CCDC39-204ENST00000476379 DCBLD2Q96PD2 775 aa4.46□□□□□ -1.7
CCDC39-204ENST00000476379 CDC6Q99741 560 aa4.46□□□□□ -1.7
CCDC39-204ENST00000476379 TGIF2Q9GZN2 237 aa4.46□□□□□ -1.7
CCDC39-204ENST00000476379 PRMT8Q9NR22 394 aaPredicted RBP4.46□□□□□ -1.7
CCDC39-204ENST00000476379 OR14J1Q9UGF5 321 aa4.46□□□□□ -1.7
CCDC39-204ENST00000476379 ST6GALNAC2Q9UJ37 374 aa4.46□□□□□ -1.7
CCDC39-204ENST00000476379 PCNX3Q9H6A9 2034 aa4.45□□□□□ -1.7
CCDC39-204ENST00000476379 A0A087WUJ7 227 aa4.45□□□□□ -1.7
CCDC39-204ENST00000476379 LNP1A1A4G5 178 aa4.45□□□□□ -1.7
CCDC39-204ENST00000476379 CYR61O00622 381 aa4.45□□□□□ -1.7
CCDC39-204ENST00000476379 HS3ST1O14792 307 aa4.45□□□□□ -1.7
CCDC39-204ENST00000476379 MTRF1O75570 445 aaKnown RBP4.45□□□□□ -1.7
CCDC39-204ENST00000476379 SCRG1O75711 98 aa4.45□□□□□ -1.7
CCDC39-204ENST00000476379 IFNA21P01568 189 aa4.45□□□□□ -1.7
CCDC39-204ENST00000476379 ITGB2P05107 769 aa4.45□□□□□ -1.7
CCDC39-204ENST00000476379 QDPRP09417 244 aa4.45□□□□□ -1.7
CCDC39-204ENST00000476379 MPLP40238 635 aa4.45□□□□□ -1.7
CCDC39-204ENST00000476379 RABIFP47224 123 aa4.45□□□□□ -1.7
CCDC39-204ENST00000476379 FHITP49789 147 aa4.45□□□□□ -1.7
CCDC39-204ENST00000476379 MMP15P51511 669 aa4.45□□□□□ -1.7
CCDC39-204ENST00000476379 SLC37A1P57057 533 aa4.45□□□□□ -1.7
CCDC39-204ENST00000476379 VAMP2P63027 116 aa4.45□□□□□ -1.7
CCDC39-204ENST00000476379 RASGEF1BQ0VAM2 473 aa4.45□□□□□ -1.7
CCDC39-204ENST00000476379 SRSF6Q13247 344 aaKnown RBP4.45□□□□□ -1.7
CCDC39-204ENST00000476379 RIN1Q13671 783 aa4.45□□□□□ -1.7
CCDC39-204ENST00000476379 FZD2Q14332 565 aa4.45□□□□□ -1.7
CCDC39-204ENST00000476379 IZUMO4Q1ZYL8 232 aa4.45□□□□□ -1.7
CCDC39-204ENST00000476379 PLEKHN1Q494U1 663 aaPredicted RBP4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms