RNA–Protein interactions for RNA: ENST00000473099.1

VPS13D-205, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2

Gene VPS13D, Length 461 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-205ENST00000473099 NEK6Q9HC98 313 aa11.16□□□□□ -0.62
VPS13D-205ENST00000473099 DAPK2Q9UIK4 370 aa11.16□□□□□ -0.62
VPS13D-205ENST00000473099 N6AMT1Q9Y5N5 214 aa11.16□□□□□ -0.62
VPS13D-205ENST00000473099 V9GYS6 101 aa11.16□□□□□ -0.62
VPS13D-205ENST00000473099 ATMQ13315 3056 aa11.15□□□□□ -0.62
VPS13D-205ENST00000473099 TRAV8-7A0A075B6U6 113 aa11.15□□□□□ -0.62
VPS13D-205ENST00000473099 CTDSP2O14595 271 aa11.15□□□□□ -0.62
VPS13D-205ENST00000473099 ALX3O95076 343 aa11.15□□□□□ -0.62
VPS13D-205ENST00000473099 CALCBP10092 127 aa11.15□□□□□ -0.62
VPS13D-205ENST00000473099 BMP4P12644 408 aa11.15□□□□□ -0.62
VPS13D-205ENST00000473099 CBR1P16152 277 aa11.15□□□□□ -0.62
VPS13D-205ENST00000473099 RAB3AP20336 220 aa11.15□□□□□ -0.62
VPS13D-205ENST00000473099 PTBP1P26599 531 aaKnown RBP eCLIP11.15□□□□□ -0.62
VPS13D-205ENST00000473099 TNFSF8P32971 234 aa11.15□□□□□ -0.62
VPS13D-205ENST00000473099 THBS2P35442 1172 aa11.15□□□□□ -0.62
VPS13D-205ENST00000473099 MAP2K3P46734 347 aa11.15□□□□□ -0.62
VPS13D-205ENST00000473099 MALLQ13021 153 aa11.15□□□□□ -0.62
VPS13D-205ENST00000473099 TBC1D28Q2M2D7 210 aa11.15□□□□□ -0.62
VPS13D-205ENST00000473099 PRR30Q53SZ7 412 aaPredicted RBP11.15□□□□□ -0.62
VPS13D-205ENST00000473099 ZBTB37Q5TC79 503 aa11.15□□□□□ -0.62
VPS13D-205ENST00000473099 UNQ6126/PRO20091Q6UXV3 157 aa11.15□□□□□ -0.62
VPS13D-205ENST00000473099 BHLHA15Q7RTS1 189 aaPredicted RBP11.15□□□□□ -0.62
VPS13D-205ENST00000473099 SSX8Q7RTT4 187 aa11.15□□□□□ -0.62
VPS13D-205ENST00000473099 MRGPRGQ86SM5 289 aa11.15□□□□□ -0.62
VPS13D-205ENST00000473099 MDP1Q86V88 176 aa11.15□□□□□ -0.62
VPS13D-205ENST00000473099 NR2C2APQ86WQ0 139 aa11.15□□□□□ -0.62
VPS13D-205ENST00000473099 MFSD4AQ8N468 514 aa11.15□□□□□ -0.62
VPS13D-205ENST00000473099 FAM169BQ8N8A8 192 aa11.15□□□□□ -0.62
VPS13D-205ENST00000473099 NAXEQ8NCW5 288 aa11.15□□□□□ -0.62
VPS13D-205ENST00000473099 OR5L1Q8NGL2 311 aa11.15□□□□□ -0.62
VPS13D-205ENST00000473099 REEP6Q96HR9 211 aa11.15□□□□□ -0.62
VPS13D-205ENST00000473099 FAM71F1Q96KD3 344 aaPredicted RBP11.15□□□□□ -0.62
VPS13D-205ENST00000473099 POM121L2Q96KW2 1035 aa11.15□□□□□ -0.62
VPS13D-205ENST00000473099 OPN3Q9H1Y3 402 aaPredicted RBP11.15□□□□□ -0.62
VPS13D-205ENST00000473099 TMEM138Q9NPI0 162 aa11.15□□□□□ -0.62
VPS13D-205ENST00000473099 TAS2R4Q9NYW5 299 aa11.15□□□□□ -0.62
VPS13D-205ENST00000473099 ZNF319Q9P2F9 582 aa11.15□□□□□ -0.62
VPS13D-205ENST00000473099 COMMD3Q9UBI1 195 aa11.15□□□□□ -0.62
VPS13D-205ENST00000473099 RABL2AQ9UBK7 228 aaPredicted RBP11.15□□□□□ -0.62
VPS13D-205ENST00000473099 SPATA2Q9UM82 520 aa11.15□□□□□ -0.62
VPS13D-205ENST00000473099 RABL2BQ9UNT1 228 aa11.15□□□□□ -0.62
VPS13D-205ENST00000473099 ETV7Q9Y603 341 aa11.15□□□□□ -0.62
VPS13D-205ENST00000473099 FASNP49327 2511 aaKnown RBP11.14□□□□□ -0.63
VPS13D-205ENST00000473099 ESPL1Q14674 2120 aa11.14□□□□□ -0.63
VPS13D-205ENST00000473099 LOC100509620A0A075B734 347 aa11.14□□□□□ -0.63
VPS13D-205ENST00000473099 C5orf49A4QMS7 147 aa11.14□□□□□ -0.63
VPS13D-205ENST00000473099 H3BSH0 61 aa11.14□□□□□ -0.63
VPS13D-205ENST00000473099 SULT1B1O43704 296 aa11.14□□□□□ -0.63
VPS13D-205ENST00000473099 MAS1P04201 325 aa11.14□□□□□ -0.63
VPS13D-205ENST00000473099 CD37P11049 281 aa11.14□□□□□ -0.63
VPS13D-205ENST00000473099 ADRA2CP18825 462 aa11.14□□□□□ -0.63
VPS13D-205ENST00000473099 ATF1P18846 271 aa11.14□□□□□ -0.63
VPS13D-205ENST00000473099 PSMB1P20618 241 aaKnown RBP11.14□□□□□ -0.63
VPS13D-205ENST00000473099 IL32P24001 234 aa11.14□□□□□ -0.63
VPS13D-205ENST00000473099 BDKRB2P30411 391 aa11.14□□□□□ -0.63
VPS13D-205ENST00000473099 PPP5CP53041 499 aa11.14□□□□□ -0.63
VPS13D-205ENST00000473099 PMPCAQ10713 525 aa11.14□□□□□ -0.63
VPS13D-205ENST00000473099 GFOD2Q3B7J2 385 aa11.14□□□□□ -0.63
VPS13D-205ENST00000473099 SNAI3Q3KNW1 292 aa11.14□□□□□ -0.63
VPS13D-205ENST00000473099 SLC25A35Q3KQZ1 300 aa11.14□□□□□ -0.63
VPS13D-205ENST00000473099 ZNF529Q6P280 563 aa11.14□□□□□ -0.63
VPS13D-205ENST00000473099 UTS2BQ765I0 119 aa11.14□□□□□ -0.63
VPS13D-205ENST00000473099 NAA40Q86UY6 237 aa11.14□□□□□ -0.63
VPS13D-205ENST00000473099 CXorf67Q86X51 503 aaPredicted RBP11.14□□□□□ -0.63
VPS13D-205ENST00000473099 LAX1Q8IWV1 398 aa11.14□□□□□ -0.63
VPS13D-205ENST00000473099 SLC30A7Q8NEW0 376 aa11.14□□□□□ -0.63
VPS13D-205ENST00000473099 SEMA6DQ8NFY4 1073 aa11.14□□□□□ -0.63
VPS13D-205ENST00000473099 OR1M1Q8NGA1 313 aa11.14□□□□□ -0.63
VPS13D-205ENST00000473099 ZNF671Q8TAW3 534 aa11.14□□□□□ -0.63
VPS13D-205ENST00000473099 TRMT10AQ8TBZ6 339 aaKnown RBP11.14□□□□□ -0.63
VPS13D-205ENST00000473099 SPSB4Q96A44 273 aa11.14□□□□□ -0.63
VPS13D-205ENST00000473099 SGK3Q96BR1 496 aa11.14□□□□□ -0.63
VPS13D-205ENST00000473099 ORAI1Q96D31 301 aa11.14□□□□□ -0.63
VPS13D-205ENST00000473099 ZNF75AQ96N20 296 aa11.14□□□□□ -0.63
VPS13D-205ENST00000473099 NOX3Q9HBY0 568 aa11.14□□□□□ -0.63
VPS13D-205ENST00000473099 ABCB9Q9NP78 766 aa11.14□□□□□ -0.63
VPS13D-205ENST00000473099 TBCCD1Q9NVR7 557 aa11.14□□□□□ -0.63
VPS13D-205ENST00000473099 ELOVL5Q9NYP7 299 aa11.14□□□□□ -0.63
VPS13D-205ENST00000473099 STEAP1Q9UHE8 339 aa11.14□□□□□ -0.63
VPS13D-205ENST00000473099 ZNF503-AS2A6NEH8 195 aa11.13□□□□□ -0.63
VPS13D-205ENST00000473099 OR5H1A6NKK0 313 aa11.13□□□□□ -0.63
VPS13D-205ENST00000473099 SLC17A2O00624 439 aa11.13□□□□□ -0.63
VPS13D-205ENST00000473099 MAGEB3O15480 346 aa11.13□□□□□ -0.63
VPS13D-205ENST00000473099 ICMTO60725 284 aa11.13□□□□□ -0.63
VPS13D-205ENST00000473099 IGKV3-15P01624 115 aa11.13□□□□□ -0.63
VPS13D-205ENST00000473099 APOA1P02647 267 aa11.13□□□□□ -0.63
VPS13D-205ENST00000473099 ALDOBP05062 364 aa11.13□□□□□ -0.63
VPS13D-205ENST00000473099 ZNF14P17017 642 aaPredicted RBP11.13□□□□□ -0.63
VPS13D-205ENST00000473099 TUBG1P23258 451 aa11.13□□□□□ -0.63
VPS13D-205ENST00000473099 TALDO1P37837 337 aa11.13□□□□□ -0.63
VPS13D-205ENST00000473099 HGFACQ04756 655 aa11.13□□□□□ -0.63
VPS13D-205ENST00000473099 RIPPLY1Q0D2K3 151 aa11.13□□□□□ -0.63
VPS13D-205ENST00000473099 C3orf36Q3SXR2 165 aa11.13□□□□□ -0.63
VPS13D-205ENST00000473099 TIMM23BQ5SRD1 257 aa11.13□□□□□ -0.63
VPS13D-205ENST00000473099 BAIAP2L2Q6UXY1 529 aa11.13□□□□□ -0.63
VPS13D-205ENST00000473099 ZNF584Q8IVC4 421 aa11.13□□□□□ -0.63
VPS13D-205ENST00000473099 C1orf174Q8IYL3 243 aa11.13□□□□□ -0.63
VPS13D-205ENST00000473099 RPRMLQ8N4K4 120 aa11.13□□□□□ -0.63
VPS13D-205ENST00000473099 STEAP2Q8NFT2 490 aa11.13□□□□□ -0.63
VPS13D-205ENST00000473099 OR6M1Q8NGM8 313 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms