RNA–Protein interactions for RNA: ENST00000466781.5

HPS4-209, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 6,136 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-209ENST00000466781 TUBB1Q9H4B7 451 aa7.88□□□□□ -1.15
HPS4-209ENST00000466781 TMEM30AQ9NV96 361 aa7.88□□□□□ -1.15
HPS4-209ENST00000466781 RBFOX1Q9NWB1 397 aaKnown RBP7.88□□□□□ -1.15
HPS4-209ENST00000466781 P4HTMQ9NXG6 502 aa7.88□□□□□ -1.15
HPS4-209ENST00000466781 A0A1W2PR48 441 aa7.87□□□□□ -1.15
HPS4-209ENST00000466781 ABCD3P28288 659 aa7.87□□□□□ -1.15
HPS4-209ENST00000466781 HCCSP53701 268 aa7.87□□□□□ -1.15
HPS4-209ENST00000466781 PTTG1IPP53801 180 aa7.87□□□□□ -1.15
HPS4-209ENST00000466781 RPL18Q07020 188 aaKnown RBP7.87□□□□□ -1.15
HPS4-209ENST00000466781 EIF3IQ13347 325 aaKnown RBP7.87□□□□□ -1.15
HPS4-209ENST00000466781 LILRA6Q6PI73 481 aa7.87□□□□□ -1.15
HPS4-209ENST00000466781 ERGIC1Q969X5 290 aa7.87□□□□□ -1.15
HPS4-209ENST00000466781 RPEQ96AT9 228 aa7.87□□□□□ -1.15
HPS4-209ENST00000466781 ACY3Q96HD9 319 aa7.87□□□□□ -1.15
HPS4-209ENST00000466781 TMEM208Q9BTX3 173 aa7.87□□□□□ -1.15
HPS4-209ENST00000466781 C20orf24Q9BUV8 137 aa7.87□□□□□ -1.15
HPS4-209ENST00000466781 HDGFL3Q9Y3E1 203 aa7.87□□□□□ -1.15
HPS4-209ENST00000466781 CITO14578 2027 aa7.87□□□□□ -1.15
HPS4-209ENST00000466781 PRSS37A4D1T9 235 aa7.87□□□□□ -1.15
HPS4-209ENST00000466781 TRABD2BA6NFA1 517 aa7.87□□□□□ -1.15
HPS4-209ENST00000466781 PPP5D1E7EU14 171 aa7.87□□□□□ -1.15
HPS4-209ENST00000466781 LINC01387J3KSC0 135 aa7.87□□□□□ -1.15
HPS4-209ENST00000466781 HMGN4O00479 90 aa7.87□□□□□ -1.15
HPS4-209ENST00000466781 NTF3P20783 257 aa7.87□□□□□ -1.15
HPS4-209ENST00000466781 GNG10P50151 68 aa7.87□□□□□ -1.15
HPS4-209ENST00000466781 GPM6AP51674 278 aa7.87□□□□□ -1.15
HPS4-209ENST00000466781 ARIH2OSQ8N7S6 290 aa7.87□□□□□ -1.15
HPS4-209ENST00000466781 NRG4Q8WWG1 115 aa7.87□□□□□ -1.15
HPS4-209ENST00000466781 MARC2Q969Z3 335 aa7.87□□□□□ -1.15
HPS4-209ENST00000466781 RPP25Q9BUL9 199 aaKnown RBP7.87□□□□□ -1.15
HPS4-209ENST00000466781 FBXO34Q9NWN3 711 aa7.87□□□□□ -1.15
HPS4-209ENST00000466781 ZNF391Q9UJN7 358 aa7.87□□□□□ -1.15
HPS4-209ENST00000466781 URGCP-MRPS24S4R325 110 aa7.87□□□□□ -1.15
HPS4-209ENST00000466781 HSPB2A8KAH6 182 aa7.87□□□□□ -1.15
HPS4-209ENST00000466781 CDK2AP1O14519 115 aa7.87□□□□□ -1.15
HPS4-209ENST00000466781 FABP7O15540 132 aa7.87□□□□□ -1.15
HPS4-209ENST00000466781 HPP00738 406 aa7.87□□□□□ -1.15
HPS4-209ENST00000466781 RAF1P04049 648 aa7.87□□□□□ -1.15
HPS4-209ENST00000466781 MNX1P50219 401 aaPredicted RBP7.87□□□□□ -1.15
HPS4-209ENST00000466781 EMDP50402 254 aa7.87□□□□□ -1.15
HPS4-209ENST00000466781 ZNF83P51522 516 aa7.87□□□□□ -1.15
HPS4-209ENST00000466781 CNN1P51911 297 aaKnown RBP7.87□□□□□ -1.15
HPS4-209ENST00000466781 HSPB2Q16082 182 aa7.87□□□□□ -1.15
HPS4-209ENST00000466781 RBM45Q8IUH3 476 aaKnown RBP7.87□□□□□ -1.15
HPS4-209ENST00000466781 SFTPA2Q8IWL1 248 aa7.87□□□□□ -1.15
HPS4-209ENST00000466781 SFTPA1Q8IWL2 248 aa7.87□□□□□ -1.15
HPS4-209ENST00000466781 OSR2Q8N2R0 312 aa7.87□□□□□ -1.15
HPS4-209ENST00000466781 RHOXF1Q8NHV9 184 aa7.87□□□□□ -1.15
HPS4-209ENST00000466781 TEAD3Q99594 435 aa7.87□□□□□ -1.15
HPS4-209ENST00000466781 OR51I2Q9H344 312 aa7.87□□□□□ -1.15
HPS4-209ENST00000466781 ASIC5Q9NY37 505 aa7.87□□□□□ -1.15
HPS4-209ENST00000466781 TMEM30CPA0ZSE6 113 aa7.87□□□□□ -1.15
HPS4-209ENST00000466781 FAM221AA4D161 298 aa7.87□□□□□ -1.15
HPS4-209ENST00000466781 MT-CO3P00414 261 aa7.87□□□□□ -1.15
HPS4-209ENST00000466781 APEX1P27695 318 aaKnown RBP7.87□□□□□ -1.15
HPS4-209ENST00000466781 ARRB2P32121 409 aa7.87□□□□□ -1.15
HPS4-209ENST00000466781 SUMO3P55854 103 aaPredicted RBP7.87□□□□□ -1.15
HPS4-209ENST00000466781 CDK5Q00535 292 aa7.87□□□□□ -1.15
HPS4-209ENST00000466781 GSG1Q2KHT4 349 aa7.87□□□□□ -1.15
HPS4-209ENST00000466781 LIPNQ5VXI9 398 aa7.87□□□□□ -1.15
HPS4-209ENST00000466781 SLC7A6Q92536 515 aa7.87□□□□□ -1.15
HPS4-209ENST00000466781 DPF1Q92782 380 aa7.87□□□□□ -1.15
HPS4-209ENST00000466781 MISP3Q96FF7 219 aa7.87□□□□□ -1.15
HPS4-209ENST00000466781 PECRQ9BY49 303 aa7.87□□□□□ -1.15
HPS4-209ENST00000466781 RAB1BQ9H0U4 201 aa7.87□□□□□ -1.15
HPS4-209ENST00000466781 MRPL22Q9NWU5 206 aaKnown RBP7.87□□□□□ -1.15
HPS4-209ENST00000466781 COX5AP20674 150 aa7.87□□□□□ -1.15
HPS4-209ENST00000466781 MLF1P58340 268 aa7.87□□□□□ -1.15
HPS4-209ENST00000466781 FOXF1Q12946 379 aa7.87□□□□□ -1.15
HPS4-209ENST00000466781 TRA2AQ13595 282 aaKnown RBP eCLIP7.87□□□□□ -1.15
HPS4-209ENST00000466781 TRIP6Q15654 476 aaKnown RBP7.87□□□□□ -1.15
HPS4-209ENST00000466781 HAGHQ16775 308 aa7.87□□□□□ -1.15
HPS4-209ENST00000466781 SLC7A5P1Q8MH63 180 aa7.87□□□□□ -1.15
HPS4-209ENST00000466781 C16orf52Q8NHV5 167 aa7.87□□□□□ -1.15
HPS4-209ENST00000466781 GPX8Q8TED1 209 aa7.87□□□□□ -1.15
HPS4-209ENST00000466781 OR5M11Q96RB7 305 aa7.87□□□□□ -1.15
HPS4-209ENST00000466781 PDFQ9HBH1 243 aa7.87□□□□□ -1.15
HPS4-209ENST00000466781 NDUFB11Q9NX14 153 aa7.87□□□□□ -1.15
HPS4-209ENST00000466781 SIX6O95475 246 aa7.86□□□□□ -1.15
HPS4-209ENST00000466781 RPL7P18124 248 aaKnown RBP7.86□□□□□ -1.15
HPS4-209ENST00000466781 FUT6P51993 359 aa7.86□□□□□ -1.15
HPS4-209ENST00000466781 GFERP55789 205 aa7.86□□□□□ -1.15
HPS4-209ENST00000466781 H3F3AP84243 136 aa7.86□□□□□ -1.15
HPS4-209ENST00000466781 RELAQ04206 551 aa7.86□□□□□ -1.15
HPS4-209ENST00000466781 PCK2Q16822 640 aa7.86□□□□□ -1.15
HPS4-209ENST00000466781 PLA1AQ53H76 456 aa7.86□□□□□ -1.15
HPS4-209ENST00000466781 TOR2AQ5JU69 321 aa7.86□□□□□ -1.15
HPS4-209ENST00000466781 TCTN3Q6NUS6 607 aa7.86□□□□□ -1.15
HPS4-209ENST00000466781 NRARPQ7Z6K4 114 aa7.86□□□□□ -1.15
HPS4-209ENST00000466781 SPNS2Q8IVW8 549 aa7.86□□□□□ -1.15
HPS4-209ENST00000466781 DRAXINQ8NBI3 349 aaPredicted RBP7.86□□□□□ -1.15
HPS4-209ENST00000466781 OR10R2Q8NGX6 335 aa7.86□□□□□ -1.15
HPS4-209ENST00000466781 ZDHHC19Q8WVZ1 309 aaPredicted RBP7.86□□□□□ -1.15
HPS4-209ENST00000466781 RPL3LQ92901 407 aaKnown RBP7.86□□□□□ -1.15
HPS4-209ENST00000466781 PKMYT1Q99640 499 aa7.86□□□□□ -1.15
HPS4-209ENST00000466781 PARP12Q9H0J9 701 aaKnown RBP7.86□□□□□ -1.15
HPS4-209ENST00000466781 TXNIPQ9H3M7 391 aa7.86□□□□□ -1.15
HPS4-209ENST00000466781 GAL3ST2Q9H3Q3 398 aa7.86□□□□□ -1.15
HPS4-209ENST00000466781 CLEC5AQ9NY25 188 aa7.86□□□□□ -1.15
HPS4-209ENST00000466781 KPTNQ9Y664 436 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms