RNA–Protein interactions for RNA: ENST00000463060.5

COL6A1-202, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 5

Gene COL6A1, Length 863 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-202ENST00000463060 ERVS71-1P61550 626 aa12.34□□□□□ -0.43
COL6A1-202ENST00000463060 PPP1CBP62140 327 aa12.34□□□□□ -0.43
COL6A1-202ENST00000463060 FAM3AP98173 230 aa12.34□□□□□ -0.43
COL6A1-202ENST00000463060 GK2Q14410 553 aaPredicted RBP12.34□□□□□ -0.43
COL6A1-202ENST00000463060 INSL4Q14641 139 aa12.34□□□□□ -0.43
COL6A1-202ENST00000463060 MSMPQ1L6U9 139 aa12.34□□□□□ -0.43
COL6A1-202ENST00000463060 CCDC54Q8NEL0 328 aa12.34□□□□□ -0.43
COL6A1-202ENST00000463060 NUP37Q8NFH4 326 aa12.34□□□□□ -0.43
COL6A1-202ENST00000463060 OR5L1Q8NGL2 311 aa12.34□□□□□ -0.43
COL6A1-202ENST00000463060 GPR148Q8TDV2 347 aa12.34□□□□□ -0.43
COL6A1-202ENST00000463060 RPL3LQ92901 407 aaKnown RBP12.34□□□□□ -0.43
COL6A1-202ENST00000463060 PLPPR2Q96GM1 343 aa12.34□□□□□ -0.43
COL6A1-202ENST00000463060 REEP6Q96HR9 211 aa12.34□□□□□ -0.43
COL6A1-202ENST00000463060 SPOCK3Q9BQ16 436 aa12.34□□□□□ -0.43
COL6A1-202ENST00000463060 KCNS3Q9BQ31 491 aa12.34□□□□□ -0.43
COL6A1-202ENST00000463060 TMED9Q9BVK6 235 aa12.34□□□□□ -0.43
COL6A1-202ENST00000463060 BCL2L14Q9BZR8 327 aa12.34□□□□□ -0.43
COL6A1-202ENST00000463060 NAA50Q9GZZ1 169 aaKnown RBP12.34□□□□□ -0.43
COL6A1-202ENST00000463060 ESRP2Q9H6T0 727 aaKnown RBP12.34□□□□□ -0.43
COL6A1-202ENST00000463060 SLC24A3Q9HC58 644 aa12.34□□□□□ -0.43
COL6A1-202ENST00000463060 HHLA2Q9UM44 414 aa12.34□□□□□ -0.43
COL6A1-202ENST00000463060 CEPT1Q9Y6K0 416 aa12.34□□□□□ -0.43
COL6A1-202ENST00000463060 TRBV5-7A0A0A0MS05 114 aa12.33□□□□□ -0.44
COL6A1-202ENST00000463060 DHRS7CA6NNS2 312 aa12.33□□□□□ -0.44
COL6A1-202ENST00000463060 SHISA9B4DS77 424 aa12.33□□□□□ -0.44
COL6A1-202ENST00000463060 GABRPO00591 440 aa12.33□□□□□ -0.44
COL6A1-202ENST00000463060 ABCD4O14678 606 aa12.33□□□□□ -0.44
COL6A1-202ENST00000463060 PIN1P1O15428 100 aa12.33□□□□□ -0.44
COL6A1-202ENST00000463060 CLDN1O95832 211 aa12.33□□□□□ -0.44
COL6A1-202ENST00000463060 HLA-DPB1P04440 258 aa12.33□□□□□ -0.44
COL6A1-202ENST00000463060 ACKR3P25106 362 aa12.33□□□□□ -0.44
COL6A1-202ENST00000463060 GLRXP35754 106 aa12.33□□□□□ -0.44
COL6A1-202ENST00000463060 OR8B8Q15620 311 aa12.33□□□□□ -0.44
COL6A1-202ENST00000463060 ACSM3Q53FZ2 586 aa12.33□□□□□ -0.44
COL6A1-202ENST00000463060 TMEM255AQ5JRV8 349 aa12.33□□□□□ -0.44
COL6A1-202ENST00000463060 GPR107Q5VW38 600 aa12.33□□□□□ -0.44
COL6A1-202ENST00000463060 GDPGP1Q6ZNW5 385 aa12.33□□□□□ -0.44
COL6A1-202ENST00000463060 DOK3Q7L591 496 aa12.33□□□□□ -0.44
COL6A1-202ENST00000463060 OR1J1Q8NGS3 322 aa12.33□□□□□ -0.44
COL6A1-202ENST00000463060 LILRB1Q8NHL6 650 aaPredicted RBP12.33□□□□□ -0.44
COL6A1-202ENST00000463060 SLC25A40Q8TBP6 338 aa12.33□□□□□ -0.44
COL6A1-202ENST00000463060 TMEM171Q8WVE6 324 aa12.33□□□□□ -0.44
COL6A1-202ENST00000463060 AKAP1Q92667 903 aaKnown RBP eCLIP12.33□□□□□ -0.44
COL6A1-202ENST00000463060 HAVCR1Q96D42 359 aa12.33□□□□□ -0.44
COL6A1-202ENST00000463060 OR2J1Q9GZK6 312 aa12.33□□□□□ -0.44
COL6A1-202ENST00000463060 PPIL3Q9H2H8 161 aaKnown RBP12.33□□□□□ -0.44
COL6A1-202ENST00000463060 OPA3Q9H6K4 179 aa12.33□□□□□ -0.44
COL6A1-202ENST00000463060 ZNF275Q9NSD4 429 aaPredicted RBP12.33□□□□□ -0.44
COL6A1-202ENST00000463060 PTTG3PQ9NZH4 202 aa12.33□□□□□ -0.44
COL6A1-202ENST00000463060 ENPP5Q9UJA9 477 aa12.33□□□□□ -0.44
COL6A1-202ENST00000463060 STUB1Q9UNE7 303 aa12.33□□□□□ -0.44
COL6A1-202ENST00000463060 LRRK2Q5S007 2527 aa12.33□□□□□ -0.44
COL6A1-202ENST00000463060 COL12A1Q99715 3063 aa12.32□□□□□ -0.44
COL6A1-202ENST00000463060 FAM221AA4D161 298 aa12.32□□□□□ -0.44
COL6A1-202ENST00000463060 ZNF879B4DU55 563 aa12.32□□□□□ -0.44
COL6A1-202ENST00000463060 CASKO14936 926 aa12.32□□□□□ -0.44
COL6A1-202ENST00000463060 SYT7O43581 403 aa12.32□□□□□ -0.44
COL6A1-202ENST00000463060 LMX1BO60663 402 aa12.32□□□□□ -0.44
COL6A1-202ENST00000463060 GATBO75879 557 aaKnown RBP12.32□□□□□ -0.44
COL6A1-202ENST00000463060 DHRS3O75911 302 aa12.32□□□□□ -0.44
COL6A1-202ENST00000463060 RGS9O75916 674 aaPredicted RBP12.32□□□□□ -0.44
COL6A1-202ENST00000463060 GABARAPO95166 117 aa12.32□□□□□ -0.44
COL6A1-202ENST00000463060 ATE1O95260 518 aa12.32□□□□□ -0.44
COL6A1-202ENST00000463060 UCHL1P09936 223 aa12.32□□□□□ -0.44
COL6A1-202ENST00000463060 RAC2P15153 192 aa12.32□□□□□ -0.44
COL6A1-202ENST00000463060 ZNF250P15622 560 aa12.32□□□□□ -0.44
COL6A1-202ENST00000463060 CFL1P23528 166 aaKnown RBP12.32□□□□□ -0.44
COL6A1-202ENST00000463060 GSK3AP49840 483 aa12.32□□□□□ -0.44
COL6A1-202ENST00000463060 MALLQ13021 153 aa12.32□□□□□ -0.44
COL6A1-202ENST00000463060 SNTB2Q13425 540 aaKnown RBP12.32□□□□□ -0.44
COL6A1-202ENST00000463060 HLXQ14774 488 aaPredicted RBP12.32□□□□□ -0.44
COL6A1-202ENST00000463060 CTF1Q16619 201 aa12.32□□□□□ -0.44
COL6A1-202ENST00000463060 Q499Y3 187 aa12.32□□□□□ -0.44
COL6A1-202ENST00000463060 ZMAT1Q5H9K5 638 aa12.32□□□□□ -0.44
COL6A1-202ENST00000463060 MBNL2Q5VZF2 373 aaKnown RBP12.32□□□□□ -0.44
COL6A1-202ENST00000463060 ASPHD2Q6ICH7 369 aa12.32□□□□□ -0.44
COL6A1-202ENST00000463060 UNQ6126/PRO20091Q6UXV3 157 aa12.32□□□□□ -0.44
COL6A1-202ENST00000463060 KLF14Q8TD94 323 aaPredicted RBP12.32□□□□□ -0.44
COL6A1-202ENST00000463060 PHYHIPQ92561 330 aa12.32□□□□□ -0.44
COL6A1-202ENST00000463060 RADILQ96JH8 1075 aa12.32□□□□□ -0.44
COL6A1-202ENST00000463060 DERL3Q96Q80 235 aa12.32□□□□□ -0.44
COL6A1-202ENST00000463060 HS3ST6Q96QI5 342 aa12.32□□□□□ -0.44
COL6A1-202ENST00000463060 OR51B6Q9H340 312 aa12.32□□□□□ -0.44
COL6A1-202ENST00000463060 BATF3Q9NR55 127 aa12.32□□□□□ -0.44
COL6A1-202ENST00000463060 TXNL4BQ9NX01 149 aaKnown RBP12.32□□□□□ -0.44
COL6A1-202ENST00000463060 SPEF1Q9Y4P9 236 aa12.32□□□□□ -0.44
COL6A1-202ENST00000463060 A0A1B0GVI7 797 aa12.31□□□□□ -0.44
COL6A1-202ENST00000463060 CYSRT1A8MQ03 144 aa12.31□□□□□ -0.44
COL6A1-202ENST00000463060 PLAUP00749 431 aa12.31□□□□□ -0.44
COL6A1-202ENST00000463060 SERPINA3P01011 423 aa12.31□□□□□ -0.44
COL6A1-202ENST00000463060 RAF1P04049 648 aa12.31□□□□□ -0.44
COL6A1-202ENST00000463060 ZNF12P17014 697 aa12.31□□□□□ -0.44
COL6A1-202ENST00000463060 THBS4P35443 961 aa12.31□□□□□ -0.44
COL6A1-202ENST00000463060 MPV17P39210 176 aa12.31□□□□□ -0.44
COL6A1-202ENST00000463060 TMBIM6P55061 237 aa12.31□□□□□ -0.44
COL6A1-202ENST00000463060 GFOD2Q3B7J2 385 aa12.31□□□□□ -0.44
COL6A1-202ENST00000463060 SPATA46Q5T0L3 261 aa12.31□□□□□ -0.44
COL6A1-202ENST00000463060 FAM27D1Q5T7N8 215 aa12.31□□□□□ -0.44
COL6A1-202ENST00000463060 TMEM42Q69YG0 159 aa12.31□□□□□ -0.44
COL6A1-202ENST00000463060 MEX3BQ6ZN04 569 aaKnown RBP12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms