RNA–Protein interactions for RNA: ENST00000462236.1

COPS3-204, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-204ENST00000462236 CTPS2Q9NRF8 586 aa3.91□□□□□ -1.78
COPS3-204ENST00000462236 B3GNT2Q9NY97 397 aa3.91□□□□□ -1.78
COPS3-204ENST00000462236 TMEM181Q9P2C4 612 aa3.91□□□□□ -1.78
COPS3-204ENST00000462236 CHRNA9Q9UGM1 479 aa3.91□□□□□ -1.78
COPS3-204ENST00000462236 ELF5Q9UKW6 265 aaPredicted RBP3.91□□□□□ -1.78
COPS3-204ENST00000462236 WIPI2Q9Y4P8 454 aa3.91□□□□□ -1.78
COPS3-204ENST00000462236 KCNE3Q9Y6H6 103 aa3.91□□□□□ -1.78
COPS3-204ENST00000462236 HECTD4Q9Y4D8 3996 aa3.91□□□□□ -1.78
COPS3-204ENST00000462236 MUC4Q99102 2169 aa3.9□□□□□ -1.78
COPS3-204ENST00000462236 IGLV3-9A0A075B6K5 115 aa3.9□□□□□ -1.79
COPS3-204ENST00000462236 MEIOCA2RUB1 952 aa3.9□□□□□ -1.79
COPS3-204ENST00000462236 C5orf63A6NC05 138 aa3.9□□□□□ -1.79
COPS3-204ENST00000462236 OR6C65A6NJZ3 312 aa3.9□□□□□ -1.79
COPS3-204ENST00000462236 A8MT66 165 aa3.9□□□□□ -1.79
COPS3-204ENST00000462236 A8MXK9 166 aa3.9□□□□□ -1.79
COPS3-204ENST00000462236 F8VVB4 439 aa3.9□□□□□ -1.79
COPS3-204ENST00000462236 F8VWA3 439 aa3.9□□□□□ -1.79
COPS3-204ENST00000462236 TRAPPC2LH3BP13 241 aa3.9□□□□□ -1.79
COPS3-204ENST00000462236 ZNF208O43345 1280 aa3.9□□□□□ -1.79
COPS3-204ENST00000462236 EIF1BO60739 113 aaKnown RBP3.9□□□□□ -1.79
COPS3-204ENST00000462236 BCAS1O75363 584 aaPredicted RBP3.9□□□□□ -1.79
COPS3-204ENST00000462236 KRT6AP02538 564 aa3.9□□□□□ -1.79
COPS3-204ENST00000462236 KRT6BP04259 564 aa3.9□□□□□ -1.79
COPS3-204ENST00000462236 HMGN2P05204 90 aaKnown RBP3.9□□□□□ -1.79
COPS3-204ENST00000462236 GUSBP08236 651 aa3.9□□□□□ -1.79
COPS3-204ENST00000462236 RBP1P09455 135 aa3.9□□□□□ -1.79
COPS3-204ENST00000462236 ALOX5P09917 674 aa3.9□□□□□ -1.79
COPS3-204ENST00000462236 PPIAL4GP0DN37 164 aa3.9□□□□□ -1.79
COPS3-204ENST00000462236 SLC2A2P11168 524 aaPredicted RBP3.9□□□□□ -1.79
COPS3-204ENST00000462236 ZNF14P17017 642 aaPredicted RBP3.9□□□□□ -1.79
COPS3-204ENST00000462236 TSPAN8P19075 237 aa3.9□□□□□ -1.79
COPS3-204ENST00000462236 ARR3P36575 388 aa3.9□□□□□ -1.79
COPS3-204ENST00000462236 CRYBB2P43320 205 aa3.9□□□□□ -1.79
COPS3-204ENST00000462236 ALDH3B1P43353 468 aa3.9□□□□□ -1.79
COPS3-204ENST00000462236 KRT6CP48668 564 aa3.9□□□□□ -1.79
COPS3-204ENST00000462236 CRIP2P52943 208 aaPredicted RBP3.9□□□□□ -1.79
COPS3-204ENST00000462236 SH3BGRP55822 239 aaPredicted RBP3.9□□□□□ -1.79
COPS3-204ENST00000462236 PAX2Q02962 417 aa3.9□□□□□ -1.79
COPS3-204ENST00000462236 PAX8Q06710 450 aa3.9□□□□□ -1.79
COPS3-204ENST00000462236 MERTKQ12866 999 aa3.9□□□□□ -1.79
COPS3-204ENST00000462236 ZNF154Q13106 437 aa3.9□□□□□ -1.79
COPS3-204ENST00000462236 SRSF9Q13242 221 aaKnown RBP eCLIP3.9□□□□□ -1.79
COPS3-204ENST00000462236 SNTB2Q13425 540 aaKnown RBP3.9□□□□□ -1.79
COPS3-204ENST00000462236 DCST2Q5T1A1 773 aa3.9□□□□□ -1.79
COPS3-204ENST00000462236 PDZK1Q5T2W1 519 aa3.9□□□□□ -1.79
COPS3-204ENST00000462236 GFI1BQ5VTD9 330 aa3.9□□□□□ -1.79
COPS3-204ENST00000462236 ABHD12BQ7Z5M8 362 aaPredicted RBP3.9□□□□□ -1.79
COPS3-204ENST00000462236 PRSS35Q8N3Z0 413 aa3.9□□□□□ -1.79
COPS3-204ENST00000462236 OR9K2Q8NGE7 335 aa3.9□□□□□ -1.79
COPS3-204ENST00000462236 OR4F5Q8NH21 305 aa3.9□□□□□ -1.79
COPS3-204ENST00000462236 FBXO25Q8TCJ0 367 aa3.9□□□□□ -1.79
COPS3-204ENST00000462236 GATAD1Q8WUU5 269 aa3.9□□□□□ -1.79
COPS3-204ENST00000462236 TMEM234Q8WY98 164 aa3.9□□□□□ -1.79
COPS3-204ENST00000462236 CDS1Q92903 461 aa3.9□□□□□ -1.79
COPS3-204ENST00000462236 CIDECQ96AQ7 238 aaPredicted RBP3.9□□□□□ -1.79
COPS3-204ENST00000462236 ZHX1-C8orf76Q96EF9 292 aa3.9□□□□□ -1.79
COPS3-204ENST00000462236 AURKBQ96GD4 344 aaPredicted RBP3.9□□□□□ -1.79
COPS3-204ENST00000462236 CCT8L2Q96SF2 557 aa3.9□□□□□ -1.79
COPS3-204ENST00000462236 SDF2Q99470 211 aa3.9□□□□□ -1.79
COPS3-204ENST00000462236 OR11A1Q9GZK7 315 aa3.9□□□□□ -1.79
COPS3-204ENST00000462236 GRPEL1Q9HAV7 217 aa3.9□□□□□ -1.79
COPS3-204ENST00000462236 BEX1Q9HBH7 125 aa3.9□□□□□ -1.79
COPS3-204ENST00000462236 MIEF1Q9NQG6 463 aa3.9□□□□□ -1.79
COPS3-204ENST00000462236 MMP26Q9NRE1 261 aa3.9□□□□□ -1.79
COPS3-204ENST00000462236 ATAD3AQ9NVI7 634 aa3.9□□□□□ -1.79
COPS3-204ENST00000462236 PURGQ9UJV8 347 aaKnown RBP3.9□□□□□ -1.79
COPS3-204ENST00000462236 PRDM4Q9UKN5 801 aa3.9□□□□□ -1.79
COPS3-204ENST00000462236 SOX21Q9Y651 276 aaPredicted RBP3.9□□□□□ -1.79
COPS3-204ENST00000462236 HYDINQ4G0P3 5121 aa3.9□□□□□ -1.79
COPS3-204ENST00000462236 TNCP24821 2201 aa3.89□□□□□ -1.79
COPS3-204ENST00000462236 TMEM72A0PK05 275 aa3.89□□□□□ -1.79
COPS3-204ENST00000462236 H3BNH8 94 aa3.89□□□□□ -1.79
COPS3-204ENST00000462236 PRAF2O60831 178 aa3.89□□□□□ -1.79
COPS3-204ENST00000462236 UPK3AO75631 287 aa3.89□□□□□ -1.79
COPS3-204ENST00000462236 UGT2B17O75795 530 aa3.89□□□□□ -1.79
COPS3-204ENST00000462236 PRB2P02812 416 aaPredicted RBP3.89□□□□□ -1.79
COPS3-204ENST00000462236 RLN1P04808 185 aa3.89□□□□□ -1.79
COPS3-204ENST00000462236 BCKDHAP12694 445 aa3.89□□□□□ -1.79
COPS3-204ENST00000462236 ZNF250P15622 560 aa3.89□□□□□ -1.79
COPS3-204ENST00000462236 TCN1P20061 433 aaPredicted RBP3.89□□□□□ -1.79
COPS3-204ENST00000462236 MAGEB1P43366 347 aa3.89□□□□□ -1.79
COPS3-204ENST00000462236 ATP4BP51164 291 aa3.89□□□□□ -1.79
COPS3-204ENST00000462236 FOXA1P55317 472 aa3.89□□□□□ -1.79
COPS3-204ENST00000462236 RAG2P55895 527 aa3.89□□□□□ -1.79
COPS3-204ENST00000462236 UBE2NP61088 152 aaKnown RBP3.89□□□□□ -1.79
COPS3-204ENST00000462236 SLC35A1P78382 337 aa3.89□□□□□ -1.79
COPS3-204ENST00000462236 LCP2Q13094 533 aa3.89□□□□□ -1.79
COPS3-204ENST00000462236 LASP1Q14847 261 aaKnown RBP3.89□□□□□ -1.79
COPS3-204ENST00000462236 MAD2L1BPQ15013 274 aaPredicted RBP3.89□□□□□ -1.79
COPS3-204ENST00000462236 MAPK14Q16539 360 aa3.89□□□□□ -1.79
COPS3-204ENST00000462236 ZNF74Q16587 644 aa3.89□□□□□ -1.79
COPS3-204ENST00000462236 MEP1BQ16820 701 aa3.89□□□□□ -1.79
COPS3-204ENST00000462236 ZNF311Q5JNZ3 666 aa3.89□□□□□ -1.79
COPS3-204ENST00000462236 FFAR4Q5NUL3 377 aa3.89□□□□□ -1.79
COPS3-204ENST00000462236 ZNF678Q5SXM1 525 aa3.89□□□□□ -1.79
COPS3-204ENST00000462236 AVPI1Q5T686 147 aa3.89□□□□□ -1.79
COPS3-204ENST00000462236 NOXRED1Q6NXP6 359 aa3.89□□□□□ -1.79
COPS3-204ENST00000462236 EMBQ6PCB8 327 aa3.89□□□□□ -1.79
COPS3-204ENST00000462236 FIP1L1Q6UN15 594 aaKnown RBP3.89□□□□□ -1.79
COPS3-204ENST00000462236 TMEM182Q6ZP80 229 aaPredicted RBP3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms