RNA–Protein interactions for RNA: ENST00000433541.1

TREX1-201, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,105 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-201ENST00000433541 OR56B2PQ8NGI1 322 aa13.21□□□□□ -0.29
TREX1-201ENST00000433541 C10orf105Q8TEF2 133 aa13.21□□□□□ -0.29
TREX1-201ENST00000433541 NRG4Q8WWG1 115 aa13.21□□□□□ -0.29
TREX1-201ENST00000433541 LGALS12Q96DT0 336 aa13.21□□□□□ -0.29
TREX1-201ENST00000433541 MYCBPQ99417 103 aaPredicted RBP13.21□□□□□ -0.29
TREX1-201ENST00000433541 ADAT1Q9BUB4 502 aaKnown RBP13.21□□□□□ -0.29
TREX1-201ENST00000433541 PBOV1Q9GZY1 135 aa13.21□□□□□ -0.29
TREX1-201ENST00000433541 RGCCQ9H4X1 137 aa13.21□□□□□ -0.29
TREX1-201ENST00000433541 NKIRAS2Q9NYR9 191 aa13.21□□□□□ -0.29
TREX1-201ENST00000433541 TREM2Q9NZC2 230 aa13.21□□□□□ -0.29
TREX1-201ENST00000433541 RRP15Q9Y3B9 282 aaKnown RBP13.21□□□□□ -0.29
TREX1-201ENST00000433541 NOP16Q9Y3C1 178 aaKnown RBP13.21□□□□□ -0.29
TREX1-201ENST00000433541 F8P00451 2351 aa13.2□□□□□ -0.3
TREX1-201ENST00000433541 NDUFS8O00217 210 aa13.2□□□□□ -0.3
TREX1-201ENST00000433541 PPIHO43447 177 aaKnown RBP13.2□□□□□ -0.3
TREX1-201ENST00000433541 HLA-DPB1P04440 258 aa13.2□□□□□ -0.3
TREX1-201ENST00000433541 GNAO1P09471 354 aa13.2□□□□□ -0.3
TREX1-201ENST00000433541 TACSTD2P09758 323 aa13.2□□□□□ -0.3
TREX1-201ENST00000433541 TNFRSF1AP19438 455 aa13.2□□□□□ -0.3
TREX1-201ENST00000433541 CA6P23280 308 aa13.2□□□□□ -0.3
TREX1-201ENST00000433541 GNALP38405 381 aa13.2□□□□□ -0.3
TREX1-201ENST00000433541 ADARB1P78563 741 aaKnown RBP13.2□□□□□ -0.3
TREX1-201ENST00000433541 MFGE8Q08431 387 aaPredicted RBP13.2□□□□□ -0.3
TREX1-201ENST00000433541 SMN1Q16637 294 aaKnown RBP13.2□□□□□ -0.3
TREX1-201ENST00000433541 IZUMO2Q6UXV1 221 aa13.2□□□□□ -0.3
TREX1-201ENST00000433541 Q6ZR03 302 aa13.2□□□□□ -0.3
TREX1-201ENST00000433541 FTMTQ8N4E7 242 aa13.2□□□□□ -0.3
TREX1-201ENST00000433541 ACBD7Q8N6N7 88 aa13.2□□□□□ -0.3
TREX1-201ENST00000433541 MAPK1IP1LQ8NDC0 245 aa13.2□□□□□ -0.3
TREX1-201ENST00000433541 ZNF540Q8NDQ6 660 aa13.2□□□□□ -0.3
TREX1-201ENST00000433541 APH1BQ8WW43 257 aa13.2□□□□□ -0.3
TREX1-201ENST00000433541 CCL17Q92583 94 aa13.2□□□□□ -0.3
TREX1-201ENST00000433541 SGK3Q96BR1 496 aa13.2□□□□□ -0.3
TREX1-201ENST00000433541 C18orf12Q96KH6 178 aa13.2□□□□□ -0.3
TREX1-201ENST00000433541 REPIN1Q9BWE0 567 aaKnown RBP13.2□□□□□ -0.3
TREX1-201ENST00000433541 REG4Q9BYZ8 158 aa13.2□□□□□ -0.3
TREX1-201ENST00000433541 MOB1AQ9H8S9 216 aa13.2□□□□□ -0.3
TREX1-201ENST00000433541 CHODLQ9H9P2 273 aa13.2□□□□□ -0.3
TREX1-201ENST00000433541 FAM206AQ9NX38 181 aa13.2□□□□□ -0.3
TREX1-201ENST00000433541 MRM2Q9UI43 246 aaKnown RBP13.2□□□□□ -0.3
TREX1-201ENST00000433541 R4GMQ9 66 aa13.2□□□□□ -0.3
TREX1-201ENST00000433541 CR1P17927 2039 aa13.2□□□□□ -0.3
TREX1-201ENST00000433541 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.19□□□□□ -0.3
TREX1-201ENST00000433541 IGHV3-64DA0A0J9YX35 117 aa13.19□□□□□ -0.3
TREX1-201ENST00000433541 IRGMA1A4Y4 181 aa13.19□□□□□ -0.3
TREX1-201ENST00000433541 F5H5P2 479 aa13.19□□□□□ -0.3
TREX1-201ENST00000433541 H0YL77 283 aa13.19□□□□□ -0.3
TREX1-201ENST00000433541 J3QLW9 94 aa13.19□□□□□ -0.3
TREX1-201ENST00000433541 LILRA1O75019 489 aa13.19□□□□□ -0.3
TREX1-201ENST00000433541 ZNF19P17023 458 aa13.19□□□□□ -0.3
TREX1-201ENST00000433541 ACHEP22303 614 aa13.19□□□□□ -0.3
TREX1-201ENST00000433541 COL8A2P25067 703 aa13.19□□□□□ -0.3
TREX1-201ENST00000433541 DCTDP32321 178 aa13.19□□□□□ -0.3
TREX1-201ENST00000433541 GPR6P46095 362 aaPredicted RBP13.19□□□□□ -0.3
TREX1-201ENST00000433541 SRP9P49458 86 aaKnown RBP13.19□□□□□ -0.3
TREX1-201ENST00000433541 GSK3AP49840 483 aa13.19□□□□□ -0.3
TREX1-201ENST00000433541 ACTA2P62736 377 aa13.19□□□□□ -0.3
TREX1-201ENST00000433541 ACTG2P63267 376 aa13.19□□□□□ -0.3
TREX1-201ENST00000433541 RAB40BQ12829 278 aa13.19□□□□□ -0.3
TREX1-201ENST00000433541 CDK5R2Q13319 367 aa13.19□□□□□ -0.3
TREX1-201ENST00000433541 RIPK1Q13546 671 aa13.19□□□□□ -0.3
TREX1-201ENST00000433541 ODF4Q2M2E3 257 aa13.19□□□□□ -0.3
TREX1-201ENST00000433541 LHFPL3Q86UP9 236 aa13.19□□□□□ -0.3
TREX1-201ENST00000433541 OR8S1Q8NH09 359 aa13.19□□□□□ -0.3
TREX1-201ENST00000433541 OR51E1Q8TCB6 317 aa13.19□□□□□ -0.3
TREX1-201ENST00000433541 ITLN1Q8WWA0 313 aa13.19□□□□□ -0.3
TREX1-201ENST00000433541 FAM71F1Q96KD3 344 aaPredicted RBP13.19□□□□□ -0.3
TREX1-201ENST00000433541 OR2V2Q96R30 315 aa13.19□□□□□ -0.3
TREX1-201ENST00000433541 SLC30A2Q9BRI3 323 aa13.19□□□□□ -0.3
TREX1-201ENST00000433541 PAPOLGQ9BWT3 736 aaKnown RBP13.19□□□□□ -0.3
TREX1-201ENST00000433541 BPESC1Q9GZL8 116 aa13.19□□□□□ -0.3
TREX1-201ENST00000433541 SLC22A4Q9H015 551 aa13.19□□□□□ -0.3
TREX1-201ENST00000433541 DLL4Q9NR61 685 aa13.19□□□□□ -0.3
TREX1-201ENST00000433541 ZNF275Q9NSD4 429 aaPredicted RBP13.19□□□□□ -0.3
TREX1-201ENST00000433541 ZNF391Q9UJN7 358 aa13.19□□□□□ -0.3
TREX1-201ENST00000433541 EXOGQ9Y2C4 368 aaKnown RBP13.19□□□□□ -0.3
TREX1-201ENST00000433541 SNX5Q9Y5X3 404 aa13.19□□□□□ -0.3
TREX1-201ENST00000433541 HSPE1-MOB4S4R3N1 261 aa13.19□□□□□ -0.3
TREX1-201ENST00000433541 hCG_38984A0A1B0GV85 526 aa13.18□□□□□ -0.3
TREX1-201ENST00000433541 ACOD1A6NK06 481 aa13.18□□□□□ -0.3
TREX1-201ENST00000433541 CLDN25C9JDP6 229 aa13.18□□□□□ -0.3
TREX1-201ENST00000433541 FAM20BO75063 409 aa13.18□□□□□ -0.3
TREX1-201ENST00000433541 WBP4O75554 376 aaKnown RBP13.18□□□□□ -0.3
TREX1-201ENST00000433541 SULT1C4O75897 302 aa13.18□□□□□ -0.3
TREX1-201ENST00000433541 INHBBP09529 407 aa13.18□□□□□ -0.3
TREX1-201ENST00000433541 DDOSTP39656 456 aa13.18□□□□□ -0.3
TREX1-201ENST00000433541 PSMB10P40306 273 aa13.18□□□□□ -0.3
TREX1-201ENST00000433541 HSPA13P48723 471 aa13.18□□□□□ -0.3
TREX1-201ENST00000433541 MMP16P51512 607 aa13.18□□□□□ -0.3
TREX1-201ENST00000433541 FAM3AP98173 230 aa13.18□□□□□ -0.3
TREX1-201ENST00000433541 ZNF85Q03923 595 aa13.18□□□□□ -0.3
TREX1-201ENST00000433541 MED21Q13503 144 aa13.18□□□□□ -0.3
TREX1-201ENST00000433541 SNCBQ16143 134 aa13.18□□□□□ -0.3
TREX1-201ENST00000433541 LIPNQ5VXI9 398 aa13.18□□□□□ -0.3
TREX1-201ENST00000433541 PRSS45Q7RTY3 260 aa13.18□□□□□ -0.3
TREX1-201ENST00000433541 THAP5Q7Z6K1 395 aa13.18□□□□□ -0.3
TREX1-201ENST00000433541 PEG10Q86TG7 708 aaKnown RBP13.18□□□□□ -0.3
TREX1-201ENST00000433541 CIARTQ8N365 385 aaPredicted RBP13.18□□□□□ -0.3
TREX1-201ENST00000433541 CSNK2A3Q8NEV1 391 aa13.18□□□□□ -0.3
TREX1-201ENST00000433541 DVL3Q92997 716 aaPredicted RBP13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms