RNA–Protein interactions for RNA: ENST00000430158.5

USP40-205, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 3

Gene USP40, Length 1,047 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-205ENST00000430158 ZNF184Q99676 751 aaPredicted RBP10.58□□□□□ -0.72
USP40-205ENST00000430158 PBOV1Q9GZY1 135 aa10.58□□□□□ -0.72
USP40-205ENST00000430158 RASSF4Q9H2L5 321 aa10.58□□□□□ -0.72
USP40-205ENST00000430158 UBAP1Q9NZ09 502 aa10.58□□□□□ -0.72
USP40-205ENST00000430158 CNOT2Q9NZN8 540 aaKnown RBP10.58□□□□□ -0.72
USP40-205ENST00000430158 NUFIP1Q9UHK0 495 aaKnown RBP10.58□□□□□ -0.72
USP40-205ENST00000430158 FBXO9Q9UK97 447 aaPredicted RBP10.58□□□□□ -0.72
USP40-205ENST00000430158 IKZF2Q9UKS7 526 aa10.58□□□□□ -0.72
USP40-205ENST00000430158 DIMT1Q9UNQ2 313 aaKnown RBP10.58□□□□□ -0.72
USP40-205ENST00000430158 R4GMQ9 66 aa10.58□□□□□ -0.72
USP40-205ENST00000430158 PMF1-BGLAPU3KQ54 211 aa10.58□□□□□ -0.72
USP40-205ENST00000430158 TEP1Q99973 2627 aaKnown RBP10.58□□□□□ -0.72
USP40-205ENST00000430158 DYSFO75923 2080 aa10.57□□□□□ -0.72
USP40-205ENST00000430158 TANC2Q9HCD6 1990 aa10.57□□□□□ -0.72
USP40-205ENST00000430158 A0A0U1RQV5 110 aa10.57□□□□□ -0.72
USP40-205ENST00000430158 A0A1B0GTI1 187 aa10.57□□□□□ -0.72
USP40-205ENST00000430158 A0A1W2PPW3 197 aa10.57□□□□□ -0.72
USP40-205ENST00000430158 DAPL1A0PJW8 107 aa10.57□□□□□ -0.72
USP40-205ENST00000430158 C17orf100A8MU93 164 aa10.57□□□□□ -0.72
USP40-205ENST00000430158 XRCC2O43543 280 aa10.57□□□□□ -0.72
USP40-205ENST00000430158 F12P00748 615 aaPredicted RBP10.57□□□□□ -0.72
USP40-205ENST00000430158 TTRP02766 147 aa10.57□□□□□ -0.72
USP40-205ENST00000430158 KRT8P05787 483 aa10.57□□□□□ -0.72
USP40-205ENST00000430158 ANXA2P07355 339 aaKnown RBP10.57□□□□□ -0.72
USP40-205ENST00000430158 NAT2P11245 290 aa10.57□□□□□ -0.72
USP40-205ENST00000430158 ETV1P50549 477 aa10.57□□□□□ -0.72
USP40-205ENST00000430158 EFNA4P52798 201 aa10.57□□□□□ -0.72
USP40-205ENST00000430158 DOC2BQ14184 412 aa10.57□□□□□ -0.72
USP40-205ENST00000430158 OR8B8Q15620 311 aa10.57□□□□□ -0.72
USP40-205ENST00000430158 SPRNQ5BIV9 151 aa10.57□□□□□ -0.72
USP40-205ENST00000430158 PRSS57Q6UWY2 283 aa10.57□□□□□ -0.72
USP40-205ENST00000430158 KCTD20Q7Z5Y7 419 aa10.57□□□□□ -0.72
USP40-205ENST00000430158 CATSPERDQ86XM0 798 aa10.57□□□□□ -0.72
USP40-205ENST00000430158 ELMOD2Q8IZ81 293 aa10.57□□□□□ -0.72
USP40-205ENST00000430158 SYS1Q8N2H4 156 aa10.57□□□□□ -0.72
USP40-205ENST00000430158 PRSS35Q8N3Z0 413 aa10.57□□□□□ -0.72
USP40-205ENST00000430158 YIPF7Q8N8F6 280 aa10.57□□□□□ -0.72
USP40-205ENST00000430158 PLPP7Q8NBV4 271 aa10.57□□□□□ -0.72
USP40-205ENST00000430158 SGCDQ92629 289 aa10.57□□□□□ -0.72
USP40-205ENST00000430158 PELI1Q96FA3 418 aa10.57□□□□□ -0.72
USP40-205ENST00000430158 PERPQ96FX8 193 aa10.57□□□□□ -0.72
USP40-205ENST00000430158 SLC30A2Q9BRI3 323 aa10.57□□□□□ -0.72
USP40-205ENST00000430158 OR10A2Q9H208 303 aa10.57□□□□□ -0.72
USP40-205ENST00000430158 RGCCQ9H4X1 137 aa10.57□□□□□ -0.72
USP40-205ENST00000430158 DUSP21Q9H596 190 aa10.57□□□□□ -0.72
USP40-205ENST00000430158 SP140LQ9H930 580 aa10.57□□□□□ -0.72
USP40-205ENST00000430158 ISG20L2Q9H9L3 353 aaKnown RBP10.57□□□□□ -0.72
USP40-205ENST00000430158 BRD7Q9NPI1 651 aa10.57□□□□□ -0.72
USP40-205ENST00000430158 ACOXLQ9NUZ1 547 aa10.57□□□□□ -0.72
USP40-205ENST00000430158 PAK1IP1Q9NWT1 392 aaPredicted RBP10.57□□□□□ -0.72
USP40-205ENST00000430158 NKIRAS2Q9NYR9 191 aa10.57□□□□□ -0.72
USP40-205ENST00000430158 CLEC2DQ9UHP7 191 aa10.57□□□□□ -0.72
USP40-205ENST00000430158 EFCAB10A6NFE3 127 aa10.56□□□□□ -0.72
USP40-205ENST00000430158 CD300LBA8K4G0 201 aa10.56□□□□□ -0.72
USP40-205ENST00000430158 E9PI62 339 aa10.56□□□□□ -0.72
USP40-205ENST00000430158 SLC1A7O00341 560 aa10.56□□□□□ -0.72
USP40-205ENST00000430158 NCR1O76036 304 aa10.56□□□□□ -0.72
USP40-205ENST00000430158 LY6HO94772 140 aa10.56□□□□□ -0.72
USP40-205ENST00000430158 IGHV1-46P01743 117 aa10.56□□□□□ -0.72
USP40-205ENST00000430158 CD55P08174 381 aa10.56□□□□□ -0.72
USP40-205ENST00000430158 BMP4P12644 408 aa10.56□□□□□ -0.72
USP40-205ENST00000430158 CCL1P22362 96 aa10.56□□□□□ -0.72
USP40-205ENST00000430158 ACKR3P25106 362 aa10.56□□□□□ -0.72
USP40-205ENST00000430158 C21orf33P30042 268 aaPredicted RBP10.56□□□□□ -0.72
USP40-205ENST00000430158 LIPAP38571 399 aa10.56□□□□□ -0.72
USP40-205ENST00000430158 KIR3DL2P43630 455 aa10.56□□□□□ -0.72
USP40-205ENST00000430158 ART1P52961 327 aa10.56□□□□□ -0.72
USP40-205ENST00000430158 ATP5J2P56134 94 aa10.56□□□□□ -0.72
USP40-205ENST00000430158 SELENOVP59797 346 aa10.56□□□□□ -0.72
USP40-205ENST00000430158 NANOS3P60323 173 aaKnown RBP10.56□□□□□ -0.72
USP40-205ENST00000430158 CSNK2BP67870 215 aa10.56□□□□□ -0.72
USP40-205ENST00000430158 SLC35A2P78381 396 aa10.56□□□□□ -0.72
USP40-205ENST00000430158 ST3GAL4Q11206 333 aa10.56□□□□□ -0.72
USP40-205ENST00000430158 MALLQ13021 153 aa10.56□□□□□ -0.72
USP40-205ENST00000430158 SNCBQ16143 134 aa10.56□□□□□ -0.72
USP40-205ENST00000430158 MOGQ16653 247 aa10.56□□□□□ -0.72
USP40-205ENST00000430158 ZNF829Q3KNS6 432 aaPredicted RBP10.56□□□□□ -0.72
USP40-205ENST00000430158 PGAP1Q75T13 922 aa10.56□□□□□ -0.72
USP40-205ENST00000430158 BPIFB6Q8NFQ5 453 aa10.56□□□□□ -0.72
USP40-205ENST00000430158 OR8G5Q8NG78 346 aa10.56□□□□□ -0.72
USP40-205ENST00000430158 SNX33Q8WV41 574 aa10.56□□□□□ -0.72
USP40-205ENST00000430158 REEP6Q96HR9 211 aa10.56□□□□□ -0.72
USP40-205ENST00000430158 PGAM5Q96HS1 289 aa10.56□□□□□ -0.72
USP40-205ENST00000430158 ALG8Q9BVK2 526 aa10.56□□□□□ -0.72
USP40-205ENST00000430158 MS4A5Q9H3V2 200 aa10.56□□□□□ -0.72
USP40-205ENST00000430158 MSL2Q9HCI7 577 aa10.56□□□□□ -0.72
USP40-205ENST00000430158 CGGBP1Q9UFW8 167 aaPredicted RBP10.56□□□□□ -0.72
USP40-205ENST00000430158 OR52A1Q9UKL2 312 aa10.56□□□□□ -0.72
USP40-205ENST00000430158 SLC22A13Q9Y226 551 aa10.56□□□□□ -0.72
USP40-205ENST00000430158 N6AMT1Q9Y5N5 214 aa10.56□□□□□ -0.72
USP40-205ENST00000430158 SNX5Q9Y5X3 404 aa10.56□□□□□ -0.72
USP40-205ENST00000430158 ABCA2Q9BZC7 2435 aa10.56□□□□□ -0.72
USP40-205ENST00000430158 CR1P17927 2039 aa10.55□□□□□ -0.72
USP40-205ENST00000430158 LOC100996750A0A140TA64 210 aa10.55□□□□□ -0.72
USP40-205ENST00000430158 IRGMA1A4Y4 181 aa10.55□□□□□ -0.72
USP40-205ENST00000430158 LOC110117498-PIK3R3F6TDL0 507 aa10.55□□□□□ -0.72
USP40-205ENST00000430158 MLNRO43193 412 aa10.55□□□□□ -0.72
USP40-205ENST00000430158 TBX1O43435 398 aa10.55□□□□□ -0.72
USP40-205ENST00000430158 TIMM8AO60220 97 aaPredicted RBP10.55□□□□□ -0.72
USP40-205ENST00000430158 RPP14O95059 124 aaKnown RBP10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms