RNA–Protein interactions for RNA: ENST00000420101.6

SEMA4D-204, Transcript of semaphorin 4D, humanhuman

TSL 1 (best) BASIC

Gene SEMA4D, Length 1,837 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-204ENST00000420101 NMES1Q9C002 83 aa13.18□□□□□ -0.3
SEMA4D-204ENST00000420101 COMMD4Q9H0A8 199 aa13.18□□□□□ -0.3
SEMA4D-204ENST00000420101 ACKR4Q9NPB9 350 aa13.18□□□□□ -0.3
SEMA4D-204ENST00000420101 TREM2Q9NZC2 230 aa13.18□□□□□ -0.3
SEMA4D-204ENST00000420101 LPAR3Q9UBY5 353 aa13.18□□□□□ -0.3
SEMA4D-204ENST00000420101 SPAARA0A1B0GVQ0 90 aa13.17□□□□□ -0.3
SEMA4D-204ENST00000420101 TMEM212A6NML5 194 aa13.17□□□□□ -0.3
SEMA4D-204ENST00000420101 ZNF208O43345 1280 aa13.17□□□□□ -0.3
SEMA4D-204ENST00000420101 ADRA2CP18825 462 aa13.17□□□□□ -0.3
SEMA4D-204ENST00000420101 CXCR1P25024 350 aa13.17□□□□□ -0.3
SEMA4D-204ENST00000420101 RAB5CP51148 216 aa13.17□□□□□ -0.3
SEMA4D-204ENST00000420101 RASGEF1BQ0VAM2 473 aa13.17□□□□□ -0.3
SEMA4D-204ENST00000420101 ATPAF1Q5TC12 328 aaPredicted RBP13.17□□□□□ -0.3
SEMA4D-204ENST00000420101 STX12Q86Y82 276 aa13.17□□□□□ -0.3
SEMA4D-204ENST00000420101 RFLNBQ8N5W9 214 aa13.17□□□□□ -0.3
SEMA4D-204ENST00000420101 OR4A4PQ8NGN8 299 aa13.17□□□□□ -0.3
SEMA4D-204ENST00000420101 OR1J2Q8NGS2 313 aa13.17□□□□□ -0.3
SEMA4D-204ENST00000420101 M1APQ8TC57 530 aa13.17□□□□□ -0.3
SEMA4D-204ENST00000420101 PAQR8Q8TEZ7 354 aa13.17□□□□□ -0.3
SEMA4D-204ENST00000420101 OR5B2Q96R09 309 aa13.17□□□□□ -0.3
SEMA4D-204ENST00000420101 CHST6Q9GZX3 395 aa13.17□□□□□ -0.3
SEMA4D-204ENST00000420101 VPS13AQ96RL7 3174 aa13.17□□□□□ -0.3
SEMA4D-204ENST00000420101 WDFY4Q6ZS81 3184 aa13.16□□□□□ -0.3
SEMA4D-204ENST00000420101 TRAV18A0A075B6X5 111 aa13.16□□□□□ -0.3
SEMA4D-204ENST00000420101 A0A1W2PNU3 283 aaPredicted RBP13.16□□□□□ -0.3
SEMA4D-204ENST00000420101 ST8SIA5O15466 376 aa13.16□□□□□ -0.3
SEMA4D-204ENST00000420101 ZBTB25P24278 435 aa13.16□□□□□ -0.3
SEMA4D-204ENST00000420101 PSMB6P28072 239 aa13.16□□□□□ -0.3
SEMA4D-204ENST00000420101 SLC25A1P53007 311 aa13.16□□□□□ -0.3
SEMA4D-204ENST00000420101 C17orf67Q0P5P2 114 aa13.16□□□□□ -0.3
SEMA4D-204ENST00000420101 SSPNQ14714 243 aa13.16□□□□□ -0.3
SEMA4D-204ENST00000420101 GFOD2Q3B7J2 385 aa13.16□□□□□ -0.3
SEMA4D-204ENST00000420101 LINC00114Q6XXX2 140 aa13.16□□□□□ -0.3
SEMA4D-204ENST00000420101 SLC16A9Q7RTY1 509 aa13.16□□□□□ -0.3
SEMA4D-204ENST00000420101 ATG4DQ86TL0 474 aaPredicted RBP13.16□□□□□ -0.3
SEMA4D-204ENST00000420101 C1QL4Q86Z23 238 aa13.16□□□□□ -0.3
SEMA4D-204ENST00000420101 TNFRSF13CQ96RJ3 184 aa13.16□□□□□ -0.3
SEMA4D-204ENST00000420101 RASL10BQ96S79 203 aa13.16□□□□□ -0.3
SEMA4D-204ENST00000420101 CCNL2Q96S94 520 aaPredicted RBP13.16□□□□□ -0.3
SEMA4D-204ENST00000420101 COL25A1Q9BXS0 654 aaPredicted RBP13.16□□□□□ -0.3
SEMA4D-204ENST00000420101 RHOFQ9HBH0 211 aa13.16□□□□□ -0.3
SEMA4D-204ENST00000420101 RNASEK-C17orf49H0YIS7 233 aa13.16□□□□□ -0.3
SEMA4D-204ENST00000420101 SLC17A2O00624 439 aa13.16□□□□□ -0.3
SEMA4D-204ENST00000420101 TAAR5O14804 337 aa13.16□□□□□ -0.3
SEMA4D-204ENST00000420101 CYB5AP00167 134 aa13.16□□□□□ -0.3
SEMA4D-204ENST00000420101 HLA-AP01891 365 aaKnown RBP13.16□□□□□ -0.3
SEMA4D-204ENST00000420101 GYPBP06028 91 aa13.16□□□□□ -0.3
SEMA4D-204ENST00000420101 CD5P06127 495 aa13.16□□□□□ -0.3
SEMA4D-204ENST00000420101 FTH1P19P0C7X4 201 aa13.16□□□□□ -0.3
SEMA4D-204ENST00000420101 FAM157CP0CG43 387 aa13.16□□□□□ -0.3
SEMA4D-204ENST00000420101 PTHLHP12272 177 aa13.16□□□□□ -0.3
SEMA4D-204ENST00000420101 ZNF44P15621 663 aa13.16□□□□□ -0.3
SEMA4D-204ENST00000420101 PSMB10P40306 273 aa13.16□□□□□ -0.3
SEMA4D-204ENST00000420101 GLP1RP43220 463 aa13.16□□□□□ -0.3
SEMA4D-204ENST00000420101 NANOS3P60323 173 aaKnown RBP13.16□□□□□ -0.3
SEMA4D-204ENST00000420101 RAB2AP61019 212 aa13.16□□□□□ -0.3
SEMA4D-204ENST00000420101 TOMM34Q15785 309 aaPredicted RBP13.16□□□□□ -0.3
SEMA4D-204ENST00000420101 OR10K2Q6IF99 312 aa13.16□□□□□ -0.3
SEMA4D-204ENST00000420101 COMMD1Q8N668 190 aa13.16□□□□□ -0.3
SEMA4D-204ENST00000420101 OR10G3Q8NGC4 313 aa13.16□□□□□ -0.3
SEMA4D-204ENST00000420101 PTX4Q96A99 478 aa13.16□□□□□ -0.3
SEMA4D-204ENST00000420101 IMMP1LQ96LU5 166 aa13.16□□□□□ -0.3
SEMA4D-204ENST00000420101 KLHDC3Q9BQ90 382 aa13.16□□□□□ -0.3
SEMA4D-204ENST00000420101 MMP25Q9NPA2 562 aa13.16□□□□□ -0.3
SEMA4D-204ENST00000420101 SDHAF3Q9NRP4 125 aa13.16□□□□□ -0.3
SEMA4D-204ENST00000420101 UFSP2Q9NUQ7 469 aa13.16□□□□□ -0.3
SEMA4D-204ENST00000420101 PPP4R1LQ9P1A2 415 aa13.16□□□□□ -0.3
SEMA4D-204ENST00000420101 TIMM10BQ9Y5J6 103 aa13.16□□□□□ -0.3
SEMA4D-204ENST00000420101 KIF26BQ2KJY2 2108 aa13.15□□□□□ -0.3
SEMA4D-204ENST00000420101 SPEGQ15772 3267 aa13.15□□□□□ -0.3
SEMA4D-204ENST00000420101 MASP2O00187 686 aa13.15□□□□□ -0.3
SEMA4D-204ENST00000420101 OR2T1O43869 369 aa13.15□□□□□ -0.3
SEMA4D-204ENST00000420101 AMY2AP04746 511 aa13.15□□□□□ -0.3
SEMA4D-204ENST00000420101 LYL1P12980 280 aa13.15□□□□□ -0.3
SEMA4D-204ENST00000420101 HIST1H1CP16403 213 aaKnown RBP13.15□□□□□ -0.3
SEMA4D-204ENST00000420101 SDHAP31040 664 aa13.15□□□□□ -0.3
SEMA4D-204ENST00000420101 RPL4P36578 427 aaKnown RBP13.15□□□□□ -0.3
SEMA4D-204ENST00000420101 NAA10P41227 235 aaPredicted RBP13.15□□□□□ -0.3
SEMA4D-204ENST00000420101 ATP1B3P54709 279 aa13.15□□□□□ -0.3
SEMA4D-204ENST00000420101 TAS2R31P59538 309 aa13.15□□□□□ -0.3
SEMA4D-204ENST00000420101 RAB11BQ15907 218 aa13.15□□□□□ -0.3
SEMA4D-204ENST00000420101 PLEKHN1Q494U1 663 aaPredicted RBP13.15□□□□□ -0.3
SEMA4D-204ENST00000420101 ZFP82Q8N141 532 aa13.15□□□□□ -0.3
SEMA4D-204ENST00000420101 HIST1H2BAQ96A08 127 aa13.15□□□□□ -0.3
SEMA4D-204ENST00000420101 SPACA9Q96E40 222 aaPredicted RBP13.15□□□□□ -0.3
SEMA4D-204ENST00000420101 OCSTAMPQ9BR26 566 aa13.15□□□□□ -0.3
SEMA4D-204ENST00000420101 ADAT1Q9BUB4 502 aaKnown RBP13.15□□□□□ -0.3
SEMA4D-204ENST00000420101 TINAGL1Q9GZM7 467 aaPredicted RBP13.15□□□□□ -0.3
SEMA4D-204ENST00000420101 ZNF230Q9UIE0 474 aaPredicted RBP13.15□□□□□ -0.3
SEMA4D-204ENST00000420101 ZNF736B4DX44 427 aaPredicted RBP13.14□□□□□ -0.31
SEMA4D-204ENST00000420101 AP4M1O00189 453 aa13.14□□□□□ -0.31
SEMA4D-204ENST00000420101 TP53I11O14683 189 aa13.14□□□□□ -0.31
SEMA4D-204ENST00000420101 DOK2O60496 412 aa13.14□□□□□ -0.31
SEMA4D-204ENST00000420101 CRHP06850 196 aa13.14□□□□□ -0.31
SEMA4D-204ENST00000420101 FBXO45P0C2W1 286 aa13.14□□□□□ -0.31
SEMA4D-204ENST00000420101 ZNF735P0CB33 412 aa13.14□□□□□ -0.31
SEMA4D-204ENST00000420101 SLC2A1P11166 492 aa13.14□□□□□ -0.31
SEMA4D-204ENST00000420101 APEHP13798 732 aaKnown RBP13.14□□□□□ -0.31
SEMA4D-204ENST00000420101 TBPP20226 339 aa13.14□□□□□ -0.31
SEMA4D-204ENST00000420101 DVL1P1P54792 670 aaPredicted RBP13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms