RNA–Protein interactions for RNA: ENST00000403890.7

NUP43-204, Transcript of nucleoporin 43, humanhuman

TSL 2

Gene NUP43, Length 1,012 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-204ENST00000403890 HAO1Q9UJM8 370 aa7.47□□□□□ -1.21
NUP43-204ENST00000403890 PRPF19Q9UMS4 504 aaKnown RBP7.47□□□□□ -1.21
NUP43-204ENST00000403890 AURKCQ9UQB9 309 aa7.47□□□□□ -1.21
NUP43-204ENST00000403890 DNAH7Q8WXX0 4024 aa7.47□□□□□ -1.21
NUP43-204ENST00000403890 hCG_1807616A0A1W2PRN6 198 aa7.46□□□□□ -1.22
NUP43-204ENST00000403890 A6NLC8 198 aa7.46□□□□□ -1.22
NUP43-204ENST00000403890 H0YHG0 523 aa7.46□□□□□ -1.22
NUP43-204ENST00000403890 SDHDO14521 159 aa7.46□□□□□ -1.22
NUP43-204ENST00000403890 UBDO15205 165 aa7.46□□□□□ -1.22
NUP43-204ENST00000403890 POLR3GO15318 223 aaPredicted RBP7.46□□□□□ -1.22
NUP43-204ENST00000403890 GMDSO60547 372 aa7.46□□□□□ -1.22
NUP43-204ENST00000403890 LHBP01229 141 aa7.46□□□□□ -1.22
NUP43-204ENST00000403890 MUC1P15941 1255 aaPredicted RBP7.46□□□□□ -1.22
NUP43-204ENST00000403890 CA6P23280 308 aa7.46□□□□□ -1.22
NUP43-204ENST00000403890 PPIBP23284 216 aaKnown RBP7.46□□□□□ -1.22
NUP43-204ENST00000403890 GSK3BP49841 420 aa7.46□□□□□ -1.22
NUP43-204ENST00000403890 POLR2JP52435 117 aaKnown RBP7.46□□□□□ -1.22
NUP43-204ENST00000403890 ECH1Q13011 328 aa7.46□□□□□ -1.22
NUP43-204ENST00000403890 SCARB2Q14108 478 aa7.46□□□□□ -1.22
NUP43-204ENST00000403890 CCDC92Q53HC0 331 aaPredicted RBP7.46□□□□□ -1.22
NUP43-204ENST00000403890 ALG10Q5BKT4 473 aa7.46□□□□□ -1.22
NUP43-204ENST00000403890 LRRC10Q5BKY1 277 aa7.46□□□□□ -1.22
NUP43-204ENST00000403890 RABL3Q5HYI8 236 aa7.46□□□□□ -1.22
NUP43-204ENST00000403890 WDR38Q5JTN6 314 aa7.46□□□□□ -1.22
NUP43-204ENST00000403890 ZFAND6Q6FIF0 208 aa7.46□□□□□ -1.22
NUP43-204ENST00000403890 HCP5Q6MZN7 132 aa7.46□□□□□ -1.22
NUP43-204ENST00000403890 ZNF826PQ6ZT77 177 aa7.46□□□□□ -1.22
NUP43-204ENST00000403890 CENPVQ7Z7K6 275 aaPredicted RBP7.46□□□□□ -1.22
NUP43-204ENST00000403890 MRPL41Q8IXM3 137 aaKnown RBP7.46□□□□□ -1.22
NUP43-204ENST00000403890 SMYD1Q8NB12 490 aa7.46□□□□□ -1.22
NUP43-204ENST00000403890 OR5D13Q8NGL4 314 aa7.46□□□□□ -1.22
NUP43-204ENST00000403890 LIPHQ8WWY8 451 aa7.46□□□□□ -1.22
NUP43-204ENST00000403890 ACOT11Q8WXI4 607 aaPredicted RBP7.46□□□□□ -1.22
NUP43-204ENST00000403890 H1FXQ92522 213 aaKnown RBP7.46□□□□□ -1.22
NUP43-204ENST00000403890 MYDGFQ969H8 173 aa7.46□□□□□ -1.22
NUP43-204ENST00000403890 SGTBQ96EQ0 304 aa7.46□□□□□ -1.22
NUP43-204ENST00000403890 RCHY1Q96PM5 261 aa7.46□□□□□ -1.22
NUP43-204ENST00000403890 PAIP1Q9H074 479 aaKnown RBP7.46□□□□□ -1.22
NUP43-204ENST00000403890 WDR55Q9H6Y2 383 aaPredicted RBP7.46□□□□□ -1.22
NUP43-204ENST00000403890 HIF3AQ9Y2N7 669 aa7.46□□□□□ -1.22
NUP43-204ENST00000403890 CAPN7Q9Y6W3 813 aa7.46□□□□□ -1.22
NUP43-204ENST00000403890 A6NIZ1 184 aa7.45□□□□□ -1.22
NUP43-204ENST00000403890 VGLL3A8MV65 326 aa7.45□□□□□ -1.22
NUP43-204ENST00000403890 EVPLLA8MZ36 301 aa7.45□□□□□ -1.22
NUP43-204ENST00000403890 RER1O15258 196 aa7.45□□□□□ -1.22
NUP43-204ENST00000403890 GLCEO94923 617 aa7.45□□□□□ -1.22
NUP43-204ENST00000403890 GRPP07492 148 aa7.45□□□□□ -1.22
NUP43-204ENST00000403890 CHATP28329 748 aa7.45□□□□□ -1.22
NUP43-204ENST00000403890 RAP1BP61224 184 aa7.45□□□□□ -1.22
NUP43-204ENST00000403890 STX1BP61266 288 aa7.45□□□□□ -1.22
NUP43-204ENST00000403890 VSNL1P62760 191 aa7.45□□□□□ -1.22
NUP43-204ENST00000403890 RAP1AP62834 184 aa7.45□□□□□ -1.22
NUP43-204ENST00000403890 BLCAPP62952 87 aa7.45□□□□□ -1.22
NUP43-204ENST00000403890 ELF3P78545 371 aaPredicted RBP7.45□□□□□ -1.22
NUP43-204ENST00000403890 IKZF1Q13422 519 aa7.45□□□□□ -1.22
NUP43-204ENST00000403890 GK2Q14410 553 aaPredicted RBP7.45□□□□□ -1.22
NUP43-204ENST00000403890 DUSP7Q16829 419 aa7.45□□□□□ -1.22
NUP43-204ENST00000403890 ADAMTSL5Q6ZMM2 481 aa7.45□□□□□ -1.22
NUP43-204ENST00000403890 COLCA1Q6ZS62 124 aa7.45□□□□□ -1.22
NUP43-204ENST00000403890 TSPYL5Q86VY4 417 aaPredicted RBP7.45□□□□□ -1.22
NUP43-204ENST00000403890 RBM45Q8IUH3 476 aaKnown RBP7.45□□□□□ -1.22
NUP43-204ENST00000403890 FAM216BQ8N7L0 139 aa7.45□□□□□ -1.22
NUP43-204ENST00000403890 ANKRD42Q8N9B4 389 aa7.45□□□□□ -1.22
NUP43-204ENST00000403890 PFN4Q8NHR9 129 aa7.45□□□□□ -1.22
NUP43-204ENST00000403890 GTF2H4Q92759 462 aa7.45□□□□□ -1.22
NUP43-204ENST00000403890 SLCO4A1Q96BD0 722 aa7.45□□□□□ -1.22
NUP43-204ENST00000403890 PRSS27Q9BQR3 290 aa7.45□□□□□ -1.22
NUP43-204ENST00000403890 PITPNC1Q9UKF7 332 aa7.45□□□□□ -1.22
NUP43-204ENST00000403890 CORO2BQ9UQ03 480 aa7.45□□□□□ -1.22
NUP43-204ENST00000403890 TCF19Q9Y242 345 aa7.45□□□□□ -1.22
NUP43-204ENST00000403890 A0A1W2PQ09 198 aa7.44□□□□□ -1.22
NUP43-204ENST00000403890 A6NDX4 124 aa7.44□□□□□ -1.22
NUP43-204ENST00000403890 H0YAE9 185 aa7.44□□□□□ -1.22
NUP43-204ENST00000403890 IGF2P01344 180 aa7.44□□□□□ -1.22
NUP43-204ENST00000403890 CD247P20963 164 aa7.44□□□□□ -1.22
NUP43-204ENST00000403890 POU1F1P28069 291 aa7.44□□□□□ -1.22
NUP43-204ENST00000403890 RBM34P42696 430 aaKnown RBP7.44□□□□□ -1.22
NUP43-204ENST00000403890 TGM4P49221 684 aa7.44□□□□□ -1.22
NUP43-204ENST00000403890 RAB13P51153 203 aa7.44□□□□□ -1.22
NUP43-204ENST00000403890 LGALS4P56470 323 aa7.44□□□□□ -1.22
NUP43-204ENST00000403890 CTXN1P60606 82 aa7.44□□□□□ -1.22
NUP43-204ENST00000403890 LSM6P62312 80 aaKnown RBP7.44□□□□□ -1.22
NUP43-204ENST00000403890 MALLQ13021 153 aa7.44□□□□□ -1.22
NUP43-204ENST00000403890 PCK2Q16822 640 aa7.44□□□□□ -1.22
NUP43-204ENST00000403890 TMEM95Q3KNT9 176 aa7.44□□□□□ -1.22
NUP43-204ENST00000403890 LCE1DQ5T752 114 aa7.44□□□□□ -1.22
NUP43-204ENST00000403890 ATPAF1Q5TC12 328 aaPredicted RBP7.44□□□□□ -1.22
NUP43-204ENST00000403890 WDR93Q6P2C0 686 aa7.44□□□□□ -1.22
NUP43-204ENST00000403890 TMEM219Q86XT9 240 aa7.44□□□□□ -1.22
NUP43-204ENST00000403890 GPR32P1Q8NGA4 272 aa7.44□□□□□ -1.22
NUP43-204ENST00000403890 OR4X2Q8NGF9 303 aa7.44□□□□□ -1.22
NUP43-204ENST00000403890 OR4D11Q8NGI4 311 aa7.44□□□□□ -1.22
NUP43-204ENST00000403890 OR9Q1Q8NGQ5 310 aa7.44□□□□□ -1.22
NUP43-204ENST00000403890 RPS4Y2Q8TD47 263 aa7.44□□□□□ -1.22
NUP43-204ENST00000403890 DUS3LQ96G46 650 aaKnown RBP7.44□□□□□ -1.22
NUP43-204ENST00000403890 ADAT1Q9BUB4 502 aaKnown RBP7.44□□□□□ -1.22
NUP43-204ENST00000403890 TMEM38AQ9H6F2 299 aa7.44□□□□□ -1.22
NUP43-204ENST00000403890 RNPEPL1Q9HAU8 725 aa7.44□□□□□ -1.22
NUP43-204ENST00000403890 NKIRAS1Q9NYS0 192 aa7.44□□□□□ -1.22
NUP43-204ENST00000403890 SLC25A37Q9NYZ2 338 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms