RNA–Protein interactions for RNA: ENST00000395898.3

VPS13C-204, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 11,012 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-204ENST00000395898 FAM96BQ9Y3D0 163 aa4.94□□□□□ -1.62
VPS13C-204ENST00000395898 SCN8AQ9UQD0 1980 aa4.93□□□□□ -1.62
VPS13C-204ENST00000395898 TRGV10A0A0A0MS01 117 aa4.93□□□□□ -1.62
VPS13C-204ENST00000395898 SPTY2D1-AS1A0A0U1RR47 76 aa4.93□□□□□ -1.62
VPS13C-204ENST00000395898 A0A1W2PNR3 127 aa4.93□□□□□ -1.62
VPS13C-204ENST00000395898 RRASP10301 218 aa4.93□□□□□ -1.62
VPS13C-204ENST00000395898 FAM58AQ8N1B3 248 aa4.93□□□□□ -1.62
VPS13C-204ENST00000395898 WBP2Q969T9 261 aa4.93□□□□□ -1.62
VPS13C-204ENST00000395898 TAAR9Q96RI9 348 aa4.93□□□□□ -1.62
VPS13C-204ENST00000395898 SLC35D1Q9NTN3 355 aa4.93□□□□□ -1.62
VPS13C-204ENST00000395898 M0R1B8 84 aa4.93□□□□□ -1.62
VPS13C-204ENST00000395898 RAB27BO00194 218 aa4.93□□□□□ -1.62
VPS13C-204ENST00000395898 FZD6O60353 706 aa4.93□□□□□ -1.62
VPS13C-204ENST00000395898 HOXC4P09017 264 aaPredicted RBP4.93□□□□□ -1.62
VPS13C-204ENST00000395898 NME1P15531 152 aaKnown RBP4.93□□□□□ -1.62
VPS13C-204ENST00000395898 TMEM11P17152 192 aa4.93□□□□□ -1.62
VPS13C-204ENST00000395898 TNFRSF1AP19438 455 aa4.93□□□□□ -1.62
VPS13C-204ENST00000395898 CLDN20P56880 219 aa4.93□□□□□ -1.62
VPS13C-204ENST00000395898 RGS7BPQ6MZT1 257 aaPredicted RBP4.93□□□□□ -1.62
VPS13C-204ENST00000395898 OR4S1Q8NGB4 309 aa4.93□□□□□ -1.62
VPS13C-204ENST00000395898 OR5B3Q8NH48 314 aa4.93□□□□□ -1.62
VPS13C-204ENST00000395898 FGF14Q92915 247 aa4.93□□□□□ -1.62
VPS13C-204ENST00000395898 SPACA9Q96E40 222 aaPredicted RBP4.93□□□□□ -1.62
VPS13C-204ENST00000395898 IL20Q9NYY1 176 aa4.93□□□□□ -1.62
VPS13C-204ENST00000395898 PPIL1Q9Y3C6 166 aa4.93□□□□□ -1.62
VPS13C-204ENST00000395898 KCNE1BA0A087WTH5 132 aa4.93□□□□□ -1.62
VPS13C-204ENST00000395898 TCRBV5S2A0A599 114 aa4.93□□□□□ -1.62
VPS13C-204ENST00000395898 OR4E1P0C645 316 aa4.93□□□□□ -1.62
VPS13C-204ENST00000395898 RAB35Q15286 201 aa4.93□□□□□ -1.62
VPS13C-204ENST00000395898 CMTM4Q8IZR5 234 aa4.93□□□□□ -1.62
VPS13C-204ENST00000395898 GABRG1Q8N1C3 465 aa4.93□□□□□ -1.62
VPS13C-204ENST00000395898 MFSD4AQ8N468 514 aa4.93□□□□□ -1.62
VPS13C-204ENST00000395898 ARRDC1-AS1Q9H2J1 176 aa4.93□□□□□ -1.62
VPS13C-204ENST00000395898 MED9Q9NWA0 146 aa4.93□□□□□ -1.62
VPS13C-204ENST00000395898 A4GNTQ9UNA3 340 aa4.93□□□□□ -1.62
VPS13C-204ENST00000395898 MDC1Q14676 2089 aaKnown RBP4.93□□□□□ -1.62
VPS13C-204ENST00000395898 PSME4Q14997 1843 aa4.93□□□□□ -1.62
VPS13C-204ENST00000395898 AQP7O14520 342 aa4.93□□□□□ -1.62
VPS13C-204ENST00000395898 ARPC3O15145 178 aa4.93□□□□□ -1.62
VPS13C-204ENST00000395898 MAGEB4O15481 346 aaPredicted RBP4.93□□□□□ -1.62
VPS13C-204ENST00000395898 RPL12P30050 165 aaKnown RBP4.93□□□□□ -1.62
VPS13C-204ENST00000395898 FABP5Q01469 135 aa4.93□□□□□ -1.62
VPS13C-204ENST00000395898 RNF165Q6ZSG1 346 aa4.93□□□□□ -1.62
VPS13C-204ENST00000395898 GALNT16Q8N428 558 aa4.93□□□□□ -1.62
VPS13C-204ENST00000395898 SLCO4A1Q96BD0 722 aa4.93□□□□□ -1.62
VPS13C-204ENST00000395898 DDOQ99489 341 aa4.93□□□□□ -1.62
VPS13C-204ENST00000395898 FAM173AQ9BQD7 235 aa4.93□□□□□ -1.62
VPS13C-204ENST00000395898 FCMRO60667 390 aa4.93□□□□□ -1.62
VPS13C-204ENST00000395898 ZNF354AO60765 605 aaPredicted RBP4.93□□□□□ -1.62
VPS13C-204ENST00000395898 ETHE1O95571 254 aa4.93□□□□□ -1.62
VPS13C-204ENST00000395898 SPP1P10451 314 aa4.93□□□□□ -1.62
VPS13C-204ENST00000395898 EPXP11678 715 aa4.93□□□□□ -1.62
VPS13C-204ENST00000395898 THBS4P35443 961 aa4.93□□□□□ -1.62
VPS13C-204ENST00000395898 GP2P55259 537 aaKnown RBP4.93□□□□□ -1.62
VPS13C-204ENST00000395898 IGFBP7Q16270 282 aa4.93□□□□□ -1.62
VPS13C-204ENST00000395898 LRRC10Q5BKY1 277 aa4.93□□□□□ -1.62
VPS13C-204ENST00000395898 FBXL6Q8N531 539 aa4.93□□□□□ -1.62
VPS13C-204ENST00000395898 C12orf10Q9HB07 376 aa4.93□□□□□ -1.62
VPS13C-204ENST00000395898 UFSP2Q9NUQ7 469 aa4.93□□□□□ -1.62
VPS13C-204ENST00000395898 SNRNP200O75643 2136 aaKnown RBP4.93□□□□□ -1.62
VPS13C-204ENST00000395898 DNAJC13O75165 2243 aa4.93□□□□□ -1.62
VPS13C-204ENST00000395898 OR7C2O60412 319 aa4.93□□□□□ -1.62
VPS13C-204ENST00000395898 CLDN15P56746 228 aa4.93□□□□□ -1.62
VPS13C-204ENST00000395898 SSPNQ14714 243 aa4.93□□□□□ -1.62
VPS13C-204ENST00000395898 GSG1Q2KHT4 349 aa4.93□□□□□ -1.62
VPS13C-204ENST00000395898 CCL4L1Q8NHW4 92 aa4.93□□□□□ -1.62
VPS13C-204ENST00000395898 C10orf90Q96M02 699 aa4.93□□□□□ -1.62
VPS13C-204ENST00000395898 GLI3P10071 1580 aa4.93□□□□□ -1.62
VPS13C-204ENST00000395898 CCDC187A0A096LP49 1063 aa4.93□□□□□ -1.62
VPS13C-204ENST00000395898 CHEK1O14757 476 aa4.93□□□□□ -1.62
VPS13C-204ENST00000395898 SLC2A10O95528 541 aa4.93□□□□□ -1.62
VPS13C-204ENST00000395898 HPP00738 406 aa4.93□□□□□ -1.62
VPS13C-204ENST00000395898 GNG3P63215 75 aa4.93□□□□□ -1.62
VPS13C-204ENST00000395898 ZNF239Q16600 458 aaKnown RBP4.93□□□□□ -1.62
VPS13C-204ENST00000395898 ASTLQ6HA08 431 aaPredicted RBP4.93□□□□□ -1.62
VPS13C-204ENST00000395898 RIMKLAQ8IXN7 391 aa4.93□□□□□ -1.62
VPS13C-204ENST00000395898 ARRDC1Q8N5I2 433 aa4.93□□□□□ -1.62
VPS13C-204ENST00000395898 OR8U1Q8NH10 309 aa4.93□□□□□ -1.62
VPS13C-204ENST00000395898 OR2V1Q8NHB1 315 aa4.93□□□□□ -1.62
VPS13C-204ENST00000395898 POM121L2Q96KW2 1035 aa4.93□□□□□ -1.62
VPS13C-204ENST00000395898 HES7Q9BYE0 225 aa4.93□□□□□ -1.62
VPS13C-204ENST00000395898 METTL12A8MUP2 240 aa4.93□□□□□ -1.62
VPS13C-204ENST00000395898 H0Y8G0 127 aa4.93□□□□□ -1.62
VPS13C-204ENST00000395898 DCTN6O00399 190 aa4.93□□□□□ -1.62
VPS13C-204ENST00000395898 FCGR2CP31995 323 aa4.93□□□□□ -1.62
VPS13C-204ENST00000395898 GNB2P62879 340 aa4.93□□□□□ -1.62
VPS13C-204ENST00000395898 TMEM196Q5HYL7 178 aa4.93□□□□□ -1.62
VPS13C-204ENST00000395898 DRAM2Q6UX65 266 aa4.93□□□□□ -1.62
VPS13C-204ENST00000395898 OR4D9Q8NGE8 314 aa4.93□□□□□ -1.62
VPS13C-204ENST00000395898 LRRC61Q9BV99 259 aa4.93□□□□□ -1.62
VPS13C-204ENST00000395898 SLC17A5Q9NRA2 495 aa4.93□□□□□ -1.62
VPS13C-204ENST00000395898 CLEC1BQ9P126 229 aa4.93□□□□□ -1.62
VPS13C-204ENST00000395898 GDF2Q9UK05 429 aaPredicted RBP4.93□□□□□ -1.62
VPS13C-204ENST00000395898 URGCP-MRPS24S4R325 110 aa4.93□□□□□ -1.62
VPS13C-204ENST00000395898 SERTM1A2A2V5 107 aa4.93□□□□□ -1.62
VPS13C-204ENST00000395898 GPR37O15354 613 aa4.93□□□□□ -1.62
VPS13C-204ENST00000395898 YIF1AO95070 293 aa4.93□□□□□ -1.62
VPS13C-204ENST00000395898 ADRB1P08588 477 aa4.93□□□□□ -1.62
VPS13C-204ENST00000395898 CTRB1P17538 263 aa4.93□□□□□ -1.62
VPS13C-204ENST00000395898 RPS16P62249 146 aaKnown RBP4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms