RNA–Protein interactions for RNA: ENST00000395823.2

HMGB1P10-201, Transcript of high mobility group box 1 pseudogene 10, humanhuman

BASIC

Gene HMGB1P10, Length 563 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P10-201ENST00000395823 USP42Q9H9J4 1324 aaKnown RBP3.43□□□□□ -1.86
HMGB1P10-201ENST00000395823 COL2A1P02458 1487 aaPredicted RBP3.42□□□□□ -1.86
HMGB1P10-201ENST00000395823 ARHGAP23Q9P227 1491 aa3.42□□□□□ -1.86
HMGB1P10-201ENST00000395823 LYRM9A8MSI8 78 aa3.42□□□□□ -1.86
HMGB1P10-201ENST00000395823 SMKR1H3BMG3 65 aa3.42□□□□□ -1.86
HMGB1P10-201ENST00000395823 PANO1I0J062 215 aa3.42□□□□□ -1.86
HMGB1P10-201ENST00000395823 M0R036 132 aa3.42□□□□□ -1.86
HMGB1P10-201ENST00000395823 NUPL2O15504 423 aaKnown RBP3.42□□□□□ -1.86
HMGB1P10-201ENST00000395823 ZNF861PO60384 105 aa3.42□□□□□ -1.86
HMGB1P10-201ENST00000395823 FARS2O95363 451 aaKnown RBP3.42□□□□□ -1.86
HMGB1P10-201ENST00000395823 ACTL6AO96019 429 aa3.42□□□□□ -1.86
HMGB1P10-201ENST00000395823 GIMD1P0DJR0 217 aa3.42□□□□□ -1.86
HMGB1P10-201ENST00000395823 PSKH1P11801 424 aa3.42□□□□□ -1.86
HMGB1P10-201ENST00000395823 ZNF17P17021 662 aa3.42□□□□□ -1.86
HMGB1P10-201ENST00000395823 ZNF30P17039 623 aa3.42□□□□□ -1.86
HMGB1P10-201ENST00000395823 PGAM1P18669 254 aa3.42□□□□□ -1.86
HMGB1P10-201ENST00000395823 M6PRP20645 277 aa3.42□□□□□ -1.86
HMGB1P10-201ENST00000395823 AK4P27144 223 aaPredicted RBP3.42□□□□□ -1.86
HMGB1P10-201ENST00000395823 GABRR2P28476 465 aa3.42□□□□□ -1.86
HMGB1P10-201ENST00000395823 MAS1LP35410 378 aa3.42□□□□□ -1.86
HMGB1P10-201ENST00000395823 RGS6P49758 472 aa3.42□□□□□ -1.86
HMGB1P10-201ENST00000395823 CRISP3P54108 245 aa3.42□□□□□ -1.86
HMGB1P10-201ENST00000395823 SIGLEC14Q08ET2 396 aa3.42□□□□□ -1.86
HMGB1P10-201ENST00000395823 OR4D1Q15615 310 aa3.42□□□□□ -1.86
HMGB1P10-201ENST00000395823 OR7A5Q15622 319 aa3.42□□□□□ -1.86
HMGB1P10-201ENST00000395823 RFX4Q33E94 735 aa3.42□□□□□ -1.86
HMGB1P10-201ENST00000395823 ZBED5Q49AG3 693 aa3.42□□□□□ -1.86
HMGB1P10-201ENST00000395823 PIGGQ5H8A4 983 aa3.42□□□□□ -1.86
HMGB1P10-201ENST00000395823 TMEM179Q6ZVK1 233 aa3.42□□□□□ -1.86
HMGB1P10-201ENST00000395823 SSX7Q7RTT5 188 aa3.42□□□□□ -1.86
HMGB1P10-201ENST00000395823 PEX26Q7Z412 305 aa3.42□□□□□ -1.86
HMGB1P10-201ENST00000395823 TAC4Q86UU9 113 aa3.42□□□□□ -1.86
HMGB1P10-201ENST00000395823 CBLN2Q8IUK8 224 aa3.42□□□□□ -1.86
HMGB1P10-201ENST00000395823 SPAG16Q8N0X2 631 aa3.42□□□□□ -1.86
HMGB1P10-201ENST00000395823 KIF2BQ8N4N8 673 aa3.42□□□□□ -1.86
HMGB1P10-201ENST00000395823 LGALS14Q8TCE9 139 aa3.42□□□□□ -1.86
HMGB1P10-201ENST00000395823 PHF10Q8WUB8 498 aaKnown RBP3.42□□□□□ -1.86
HMGB1P10-201ENST00000395823 S100PBPQ96BU1 408 aa3.42□□□□□ -1.86
HMGB1P10-201ENST00000395823 RNF170Q96K19 258 aa3.42□□□□□ -1.86
HMGB1P10-201ENST00000395823 CIB1Q99828 191 aa3.42□□□□□ -1.86
HMGB1P10-201ENST00000395823 TMEM38AQ9H6F2 299 aa3.42□□□□□ -1.86
HMGB1P10-201ENST00000395823 WDR54Q9H977 334 aa3.42□□□□□ -1.86
HMGB1P10-201ENST00000395823 MRM2Q9UI43 246 aaKnown RBP3.42□□□□□ -1.86
HMGB1P10-201ENST00000395823 TP53TG3Q9ULZ0 132 aa3.42□□□□□ -1.86
HMGB1P10-201ENST00000395823 SCML1Q9UN30 329 aa3.42□□□□□ -1.86
HMGB1P10-201ENST00000395823 AP3M1Q9Y2T2 418 aa3.42□□□□□ -1.86
HMGB1P10-201ENST00000395823 MRPS18BQ9Y676 258 aaKnown RBP3.42□□□□□ -1.86
HMGB1P10-201ENST00000395823 KDM6BO15054 1643 aa3.41□□□□□ -1.86
HMGB1P10-201ENST00000395823 MAP3K5Q99683 1374 aa3.41□□□□□ -1.86
HMGB1P10-201ENST00000395823 IGLV1-36A0A0B4J1U3 117 aa3.41□□□□□ -1.86
HMGB1P10-201ENST00000395823 A0A1W2PRF3 423 aa3.41□□□□□ -1.86
HMGB1P10-201ENST00000395823 A0A1W2PRM7 423 aa3.41□□□□□ -1.86
HMGB1P10-201ENST00000395823 H3BN98 237 aa3.41□□□□□ -1.86
HMGB1P10-201ENST00000395823 SLC16A4O15374 487 aa3.41□□□□□ -1.86
HMGB1P10-201ENST00000395823 LDOC1O95751 146 aaPredicted RBP3.41□□□□□ -1.86
HMGB1P10-201ENST00000395823 IGLV1-47P01700 117 aa3.41□□□□□ -1.86
HMGB1P10-201ENST00000395823 IGLV2-23P01705 113 aa3.41□□□□□ -1.86
HMGB1P10-201ENST00000395823 FABP1P07148 127 aa3.41□□□□□ -1.86
HMGB1P10-201ENST00000395823 CD3GP09693 182 aa3.41□□□□□ -1.86
HMGB1P10-201ENST00000395823 KRTAP1-4P0C5Y4 121 aa3.41□□□□□ -1.86
HMGB1P10-201ENST00000395823 CT45A6P0DMU7 189 aa3.41□□□□□ -1.86
HMGB1P10-201ENST00000395823 CT45A5P0DMU8 189 aa3.41□□□□□ -1.86
HMGB1P10-201ENST00000395823 CT45A7P0DMV0 189 aa3.41□□□□□ -1.86
HMGB1P10-201ENST00000395823 ELK1P19419 428 aa3.41□□□□□ -1.86
HMGB1P10-201ENST00000395823 S100A1P23297 94 aa3.41□□□□□ -1.86
HMGB1P10-201ENST00000395823 CCNE1P24864 410 aa3.41□□□□□ -1.86
HMGB1P10-201ENST00000395823 CFHR2P36980 270 aa3.41□□□□□ -1.86
HMGB1P10-201ENST00000395823 GNG10P50151 68 aa3.41□□□□□ -1.86
HMGB1P10-201ENST00000395823 ATP5J2P56134 94 aa3.41□□□□□ -1.86
HMGB1P10-201ENST00000395823 OR2B6P58173 313 aa3.41□□□□□ -1.86
HMGB1P10-201ENST00000395823 ACTBP60709 375 aa3.41□□□□□ -1.86
HMGB1P10-201ENST00000395823 STXBP1P61764 594 aaKnown RBP3.41□□□□□ -1.86
HMGB1P10-201ENST00000395823 ACTG1P63261 375 aa3.41□□□□□ -1.86
HMGB1P10-201ENST00000395823 TWF1Q12792 350 aa3.41□□□□□ -1.86
HMGB1P10-201ENST00000395823 MADCAM1Q13477 382 aa3.41□□□□□ -1.86
HMGB1P10-201ENST00000395823 GABRA6Q16445 453 aa3.41□□□□□ -1.86
HMGB1P10-201ENST00000395823 IMPG1Q17R60 797 aa3.41□□□□□ -1.86
HMGB1P10-201ENST00000395823 EXOC3L4Q17RC7 722 aa3.41□□□□□ -1.86
HMGB1P10-201ENST00000395823 RSPO1Q2MKA7 263 aaPredicted RBP3.41□□□□□ -1.86
HMGB1P10-201ENST00000395823 CCDC153Q494R4 210 aa3.41□□□□□ -1.86
HMGB1P10-201ENST00000395823 CT45A1Q5HYN5 189 aa3.41□□□□□ -1.86
HMGB1P10-201ENST00000395823 LCE3CQ5T5A8 94 aa3.41□□□□□ -1.86
HMGB1P10-201ENST00000395823 RSBN1Q5VWQ0 802 aaPredicted RBP3.41□□□□□ -1.86
HMGB1P10-201ENST00000395823 LPCAT4Q643R3 524 aa3.41□□□□□ -1.86
HMGB1P10-201ENST00000395823 PRMT9Q6P2P2 845 aa3.41□□□□□ -1.86
HMGB1P10-201ENST00000395823 ASCL4Q6XD76 172 aa3.41□□□□□ -1.86
HMGB1P10-201ENST00000395823 SSX6Q7RTT6 188 aa3.41□□□□□ -1.86
HMGB1P10-201ENST00000395823 SMIM15Q7Z3B0 74 aa3.41□□□□□ -1.86
HMGB1P10-201ENST00000395823 TMEM150AQ86TG1 271 aa3.41□□□□□ -1.86
HMGB1P10-201ENST00000395823 GID4Q8IVV7 300 aa3.41□□□□□ -1.86
HMGB1P10-201ENST00000395823 ENTHD1Q8IYW4 607 aa3.41□□□□□ -1.86
HMGB1P10-201ENST00000395823 OR5D18Q8NGL1 313 aa3.41□□□□□ -1.86
HMGB1P10-201ENST00000395823 OR2A1Q8NGT9 310 aa3.41□□□□□ -1.86
HMGB1P10-201ENST00000395823 OR6N2Q8NGY6 317 aa3.41□□□□□ -1.86
HMGB1P10-201ENST00000395823 CT45A3Q8NHU0 189 aa3.41□□□□□ -1.86
HMGB1P10-201ENST00000395823 CA5BP1Q8WTZ4 195 aa3.41□□□□□ -1.86
HMGB1P10-201ENST00000395823 FAM3DQ96BQ1 224 aa3.41□□□□□ -1.86
HMGB1P10-201ENST00000395823 DNAJC19Q96DA6 116 aa3.41□□□□□ -1.86
HMGB1P10-201ENST00000395823 CPB2Q96IY4 423 aa3.41□□□□□ -1.86
HMGB1P10-201ENST00000395823 ZFP3Q96NJ6 502 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms