RNA–Protein interactions for RNA: ENST00000393824.7

CUX1-204, Transcript of cut like homeobox 1, humanhuman

TSL 2 BASIC

Gene CUX1, Length 2,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-204ENST00000393824 HOXB13Q92826 284 aaPredicted RBP9.94□□□□□ -0.82
CUX1-204ENST00000393824 ZNF775Q96BV0 537 aaPredicted RBP9.94□□□□□ -0.82
CUX1-204ENST00000393824 RAB3CQ96E17 227 aa9.94□□□□□ -0.82
CUX1-204ENST00000393824 SLC6A7Q99884 636 aa9.94□□□□□ -0.82
CUX1-204ENST00000393824 PRRT1Q99946 306 aa9.94□□□□□ -0.82
CUX1-204ENST00000393824 SULT4A1Q9BR01 284 aa9.94□□□□□ -0.82
CUX1-204ENST00000393824 NMES1Q9C002 83 aa9.94□□□□□ -0.82
CUX1-204ENST00000393824 CHRNA10Q9GZZ6 450 aa9.94□□□□□ -0.82
CUX1-204ENST00000393824 CST11Q9H112 138 aa9.94□□□□□ -0.82
CUX1-204ENST00000393824 ATG5Q9H1Y0 275 aa9.94□□□□□ -0.82
CUX1-204ENST00000393824 LYRM4Q9HD34 91 aa9.94□□□□□ -0.82
CUX1-204ENST00000393824 RPS10P5Q9NQ39 176 aa9.94□□□□□ -0.82
CUX1-204ENST00000393824 SHPKQ9UHJ6 478 aa9.94□□□□□ -0.82
CUX1-204ENST00000393824 FITM1A5D6W6 292 aa9.93□□□□□ -0.82
CUX1-204ENST00000393824 HSPB2A8KAH6 182 aa9.93□□□□□ -0.82
CUX1-204ENST00000393824 C9JQL5 133 aa9.93□□□□□ -0.82
CUX1-204ENST00000393824 TGFBR3LH3BV60 316 aa9.93□□□□□ -0.82
CUX1-204ENST00000393824 KCNAB3O43448 404 aa9.93□□□□□ -0.82
CUX1-204ENST00000393824 CD2P06729 351 aa9.93□□□□□ -0.82
CUX1-204ENST00000393824 ARL4DP49703 201 aa9.93□□□□□ -0.82
CUX1-204ENST00000393824 PLAURQ03405 335 aa9.93□□□□□ -0.82
CUX1-204ENST00000393824 ZFP36L1Q07352 338 aaKnown RBP9.93□□□□□ -0.82
CUX1-204ENST00000393824 MEF2DQ14814 521 aa9.93□□□□□ -0.82
CUX1-204ENST00000393824 HSPB2Q16082 182 aa9.93□□□□□ -0.82
CUX1-204ENST00000393824 TRMT12Q53H54 448 aaKnown RBP9.93□□□□□ -0.82
CUX1-204ENST00000393824 ULK3Q6PHR2 472 aa9.93□□□□□ -0.82
CUX1-204ENST00000393824 BTNL8Q6UX41 500 aa9.93□□□□□ -0.82
CUX1-204ENST00000393824 SLC16A9Q7RTY1 509 aa9.93□□□□□ -0.82
CUX1-204ENST00000393824 ZNF550Q7Z398 422 aa9.93□□□□□ -0.82
CUX1-204ENST00000393824 CA13Q8N1Q1 262 aa9.93□□□□□ -0.82
CUX1-204ENST00000393824 ZSCAN4Q8NAM6 433 aaPredicted RBP9.93□□□□□ -0.82
CUX1-204ENST00000393824 RRNAD1Q96FB5 475 aaKnown RBP9.93□□□□□ -0.82
CUX1-204ENST00000393824 KIRREL1Q96J84 757 aa9.93□□□□□ -0.82
CUX1-204ENST00000393824 MKKSQ9NPJ1 570 aaPredicted RBP9.93□□□□□ -0.82
CUX1-204ENST00000393824 LAMP5Q9UJQ1 280 aa9.93□□□□□ -0.82
CUX1-204ENST00000393824 ADAM18Q9Y3Q7 739 aa9.93□□□□□ -0.82
CUX1-204ENST00000393824 DMXL2Q8TDJ6 3036 aa9.93□□□□□ -0.82
CUX1-204ENST00000393824 LOC105378220A0A1B0GUY1 285 aaPredicted RBP9.93□□□□□ -0.82
CUX1-204ENST00000393824 TMEM212A6NML5 194 aa9.93□□□□□ -0.82
CUX1-204ENST00000393824 EEF1E1-BLOC1S5C9J1V9 151 aa9.93□□□□□ -0.82
CUX1-204ENST00000393824 CLDN4O14493 209 aa9.93□□□□□ -0.82
CUX1-204ENST00000393824 NKX2-2O95096 273 aa9.93□□□□□ -0.82
CUX1-204ENST00000393824 DUS4LO95620 317 aaKnown RBP9.93□□□□□ -0.82
CUX1-204ENST00000393824 LYL1P12980 280 aa9.93□□□□□ -0.82
CUX1-204ENST00000393824 CD80P33681 288 aa9.93□□□□□ -0.82
CUX1-204ENST00000393824 MAS1LP35410 378 aa9.93□□□□□ -0.82
CUX1-204ENST00000393824 ACAA2P42765 397 aaKnown RBP9.93□□□□□ -0.82
CUX1-204ENST00000393824 CX3CR1P49238 355 aa9.93□□□□□ -0.82
CUX1-204ENST00000393824 SLC25A1P53007 311 aa9.93□□□□□ -0.82
CUX1-204ENST00000393824 RAB11BQ15907 218 aa9.93□□□□□ -0.82
CUX1-204ENST00000393824 SCGB2B2Q4G0G5 96 aa9.93□□□□□ -0.82
CUX1-204ENST00000393824 ALG10BQ5I7T1 473 aa9.93□□□□□ -0.82
CUX1-204ENST00000393824 FAM69BQ5VUD6 431 aa9.93□□□□□ -0.82
CUX1-204ENST00000393824 EIF5AL1Q6IS14 154 aaKnown RBP9.93□□□□□ -0.82
CUX1-204ENST00000393824 FIGNL1Q6PIW4 674 aa9.93□□□□□ -0.82
CUX1-204ENST00000393824 ARRDC1Q8N5I2 433 aa9.93□□□□□ -0.82
CUX1-204ENST00000393824 GRHL3Q8TE85 626 aa9.93□□□□□ -0.82
CUX1-204ENST00000393824 GPX7Q96SL4 187 aaPredicted RBP9.93□□□□□ -0.82
CUX1-204ENST00000393824 RSRP1Q9BUV0 290 aa9.93□□□□□ -0.82
CUX1-204ENST00000393824 ALG12Q9BV10 488 aa9.93□□□□□ -0.82
CUX1-204ENST00000393824 ADAP2Q9NPF8 381 aa9.93□□□□□ -0.82
CUX1-204ENST00000393824 PPP4R1LQ9P1A2 415 aa9.93□□□□□ -0.82
CUX1-204ENST00000393824 CLDN16Q9Y5I7 305 aa9.93□□□□□ -0.82
CUX1-204ENST00000393824 A0A0A6YYH2 397 aa9.92□□□□□ -0.82
CUX1-204ENST00000393824 C7orf77A4D0Y5 90 aa9.92□□□□□ -0.82
CUX1-204ENST00000393824 METTL21EPA6NDL7 271 aa9.92□□□□□ -0.82
CUX1-204ENST00000393824 A6NJ64 397 aa9.92□□□□□ -0.82
CUX1-204ENST00000393824 A6NLC8 198 aa9.92□□□□□ -0.82
CUX1-204ENST00000393824 TCAPO15273 167 aa9.92□□□□□ -0.82
CUX1-204ENST00000393824 FGF17O60258 216 aa9.92□□□□□ -0.82
CUX1-204ENST00000393824 HOXB5P09067 269 aa9.92□□□□□ -0.82
CUX1-204ENST00000393824 ZNF28P17035 718 aa9.92□□□□□ -0.82
CUX1-204ENST00000393824 HOXA5P20719 270 aa9.92□□□□□ -0.82
CUX1-204ENST00000393824 GRPRP30550 384 aa9.92□□□□□ -0.82
CUX1-204ENST00000393824 INSM1Q01101 510 aaPredicted RBP9.92□□□□□ -0.82
CUX1-204ENST00000393824 PYY3Q5JQD4 70 aa9.92□□□□□ -0.82
CUX1-204ENST00000393824 DHRS13Q6UX07 377 aa9.92□□□□□ -0.82
CUX1-204ENST00000393824 DGAT2L6Q6ZPD8 337 aa9.92□□□□□ -0.82
CUX1-204ENST00000393824 REC114Q7Z4M0 266 aa9.92□□□□□ -0.82
CUX1-204ENST00000393824 OR2G2Q8NGZ5 317 aa9.92□□□□□ -0.82
CUX1-204ENST00000393824 ZPLD1Q8TCW7 415 aa9.92□□□□□ -0.82
CUX1-204ENST00000393824 MMABQ96EY8 250 aaPredicted RBP9.92□□□□□ -0.82
CUX1-204ENST00000393824 CCNL2Q96S94 520 aaPredicted RBP9.92□□□□□ -0.82
CUX1-204ENST00000393824 COMMD4Q9H0A8 199 aa9.92□□□□□ -0.82
CUX1-204ENST00000393824 ST6GALNAC1Q9NSC7 600 aaPredicted RBP9.92□□□□□ -0.82
CUX1-204ENST00000393824 CUTCQ9NTM9 273 aa9.92□□□□□ -0.82
CUX1-204ENST00000393824 FBXO34Q9NWN3 711 aa9.92□□□□□ -0.82
CUX1-204ENST00000393824 SPTBN4Q9H254 2564 aa9.92□□□□□ -0.82
CUX1-204ENST00000393824 COL5A1P20908 1838 aaPredicted RBP9.92□□□□□ -0.82
CUX1-204ENST00000393824 TMEM72A0PK05 275 aa9.91□□□□□ -0.82
CUX1-204ENST00000393824 H0YIZ8 118 aa9.91□□□□□ -0.82
CUX1-204ENST00000393824 EFSO43281 561 aa9.91□□□□□ -0.82
CUX1-204ENST00000393824 ITGA3P26006 1051 aa9.91□□□□□ -0.82
CUX1-204ENST00000393824 LPAR6P43657 344 aa9.91□□□□□ -0.82
CUX1-204ENST00000393824 RBP2P50120 134 aa9.91□□□□□ -0.82
CUX1-204ENST00000393824 DUSP3P51452 185 aaPredicted RBP9.91□□□□□ -0.82
CUX1-204ENST00000393824 PRPS1P60891 318 aa9.91□□□□□ -0.82
CUX1-204ENST00000393824 EIF5AP63241 154 aaKnown RBP9.91□□□□□ -0.82
CUX1-204ENST00000393824 BTG2P78543 158 aa9.91□□□□□ -0.82
CUX1-204ENST00000393824 SSPNQ14714 243 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms