RNA–Protein interactions for RNA: ENST00000379446.9

NEDD9-202, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NEDD9, Length 4,536 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-202ENST00000379446 VN1R4Q7Z5H5 301 aa5.83□□□□□ -1.48
NEDD9-202ENST00000379446 ANKRD53Q8N9V6 530 aa5.83□□□□□ -1.48
NEDD9-202ENST00000379446 RELL2Q8NC24 303 aaPredicted RBP5.83□□□□□ -1.48
NEDD9-202ENST00000379446 NIPAL2Q9H841 368 aa5.83□□□□□ -1.48
NEDD9-202ENST00000379446 TUBA4BQ9H853 241 aa5.83□□□□□ -1.48
NEDD9-202ENST00000379446 KLHL21Q9UJP4 597 aa5.83□□□□□ -1.48
NEDD9-202ENST00000379446 NTNG1Q9Y2I2 539 aa5.83□□□□□ -1.48
NEDD9-202ENST00000379446 CCDC88CQ9P219 2028 aa5.83□□□□□ -1.48
NEDD9-202ENST00000379446 AGAP14A8MT82 685 aa5.83□□□□□ -1.48
NEDD9-202ENST00000379446 RAF1P04049 648 aa5.83□□□□□ -1.48
NEDD9-202ENST00000379446 UCHL1P09936 223 aa5.83□□□□□ -1.48
NEDD9-202ENST00000379446 PSMA6P60900 246 aaKnown RBP5.83□□□□□ -1.48
NEDD9-202ENST00000379446 INSL4Q14641 139 aa5.83□□□□□ -1.48
NEDD9-202ENST00000379446 SLC22A6Q4U2R8 563 aa5.83□□□□□ -1.48
NEDD9-202ENST00000379446 CENPVQ7Z7K6 275 aaPredicted RBP5.83□□□□□ -1.48
NEDD9-202ENST00000379446 AMER3Q8N944 861 aa5.83□□□□□ -1.48
NEDD9-202ENST00000379446 OR4M2Q8NGB6 313 aa5.83□□□□□ -1.48
NEDD9-202ENST00000379446 OR52I1Q8NGK6 324 aa5.83□□□□□ -1.48
NEDD9-202ENST00000379446 OR6S1Q8NH40 331 aa5.83□□□□□ -1.48
NEDD9-202ENST00000379446 NT5CQ8TCD5 201 aa5.83□□□□□ -1.48
NEDD9-202ENST00000379446 GSX2Q9BZM3 304 aa5.83□□□□□ -1.48
NEDD9-202ENST00000379446 LAT2Q9GZY6 243 aa5.83□□□□□ -1.48
NEDD9-202ENST00000379446 C12orf10Q9HB07 376 aa5.83□□□□□ -1.48
NEDD9-202ENST00000379446 TREM1Q9NP99 234 aa5.83□□□□□ -1.48
NEDD9-202ENST00000379446 A0A0A6YYJ9 748 aa5.82□□□□□ -1.48
NEDD9-202ENST00000379446 SPINT2O43291 252 aa5.82□□□□□ -1.48
NEDD9-202ENST00000379446 GREM1O60565 184 aa5.82□□□□□ -1.48
NEDD9-202ENST00000379446 CRTAPO75718 401 aaPredicted RBP5.82□□□□□ -1.48
NEDD9-202ENST00000379446 SNAPC5O75971 98 aa5.82□□□□□ -1.48
NEDD9-202ENST00000379446 PATE4P0C8F1 98 aa5.82□□□□□ -1.48
NEDD9-202ENST00000379446 GFRA1P56159 465 aa5.82□□□□□ -1.48
NEDD9-202ENST00000379446 ZFP36L1Q07352 338 aaKnown RBP5.82□□□□□ -1.48
NEDD9-202ENST00000379446 RAB11BQ15907 218 aa5.82□□□□□ -1.48
NEDD9-202ENST00000379446 TUSC1Q2TAM9 212 aa5.82□□□□□ -1.48
NEDD9-202ENST00000379446 HIKESHIQ53FT3 197 aa5.82□□□□□ -1.48
NEDD9-202ENST00000379446 PAN3Q58A45 887 aaKnown RBP5.82□□□□□ -1.48
NEDD9-202ENST00000379446 LINC00299Q6ZSB3 139 aa5.82□□□□□ -1.48
NEDD9-202ENST00000379446 SERPINA12Q8IW75 414 aa5.82□□□□□ -1.48
NEDD9-202ENST00000379446 FAM71CQ8NEG0 241 aa5.82□□□□□ -1.48
NEDD9-202ENST00000379446 GPR32P1Q8NGA4 272 aa5.82□□□□□ -1.48
NEDD9-202ENST00000379446 DYNLRB2Q8TF09 96 aa5.82□□□□□ -1.48
NEDD9-202ENST00000379446 FBLIM1Q8WUP2 373 aa5.82□□□□□ -1.48
NEDD9-202ENST00000379446 UPRTQ96BW1 309 aa5.82□□□□□ -1.48
NEDD9-202ENST00000379446 CNN2Q99439 309 aaKnown RBP5.82□□□□□ -1.48
NEDD9-202ENST00000379446 HEXA-AS1Q9H8Q6 139 aa5.82□□□□□ -1.48
NEDD9-202ENST00000379446 HRASLSQ9HDD0 168 aa5.82□□□□□ -1.48
NEDD9-202ENST00000379446 NIT2Q9NQR4 276 aa5.82□□□□□ -1.48
NEDD9-202ENST00000379446 DOCK10Q96BY6 2186 aa5.82□□□□□ -1.48
NEDD9-202ENST00000379446 ZNF705EA8MWA4 302 aaPredicted RBP5.82□□□□□ -1.48
NEDD9-202ENST00000379446 NME2P1O60361 137 aa5.82□□□□□ -1.48
NEDD9-202ENST00000379446 MPIG6BO95866 241 aa5.82□□□□□ -1.48
NEDD9-202ENST00000379446 IL1AP01583 271 aa5.82□□□□□ -1.48
NEDD9-202ENST00000379446 TFP02787 698 aa5.82□□□□□ -1.48
NEDD9-202ENST00000379446 H2AFB2P0C5Z0 115 aa5.82□□□□□ -1.48
NEDD9-202ENST00000379446 ACSM4P0C7M7 580 aa5.82□□□□□ -1.48
NEDD9-202ENST00000379446 VSIG10L2P0DP72 767 aa5.82□□□□□ -1.48
NEDD9-202ENST00000379446 NME2P22392 152 aa5.82□□□□□ -1.48
NEDD9-202ENST00000379446 SNCAP37840 140 aa5.82□□□□□ -1.48
NEDD9-202ENST00000379446 RAC3P60763 192 aa5.82□□□□□ -1.48
NEDD9-202ENST00000379446 PRSS53Q2L4Q9 553 aa5.82□□□□□ -1.48
NEDD9-202ENST00000379446 AWAT2Q6E213 333 aa5.82□□□□□ -1.48
NEDD9-202ENST00000379446 RNF165Q6ZSG1 346 aa5.82□□□□□ -1.48
NEDD9-202ENST00000379446 TSEN54Q7Z6J9 526 aaKnown RBP5.82□□□□□ -1.48
NEDD9-202ENST00000379446 CPOQ8IVL8 374 aa5.82□□□□□ -1.48
NEDD9-202ENST00000379446 OR4M1Q8NGD0 313 aa5.82□□□□□ -1.48
NEDD9-202ENST00000379446 NEURL3Q96EH8 262 aa5.82□□□□□ -1.48
NEDD9-202ENST00000379446 SPSB2Q99619 263 aa5.82□□□□□ -1.48
NEDD9-202ENST00000379446 THAP7Q9BT49 309 aaPredicted RBP5.82□□□□□ -1.48
NEDD9-202ENST00000379446 TMEM208Q9BTX3 173 aa5.82□□□□□ -1.48
NEDD9-202ENST00000379446 CDCA4Q9BXL8 241 aa5.82□□□□□ -1.48
NEDD9-202ENST00000379446 ZNF700Q9H0M5 742 aa5.82□□□□□ -1.48
NEDD9-202ENST00000379446 IFT22Q9H7X7 185 aa5.82□□□□□ -1.48
NEDD9-202ENST00000379446 MED20Q9H944 212 aa5.82□□□□□ -1.48
NEDD9-202ENST00000379446 SETXQ7Z333 2677 aaKnown RBP5.82□□□□□ -1.48
NEDD9-202ENST00000379446 A0A0B4J203 849 aa5.82□□□□□ -1.48
NEDD9-202ENST00000379446 HMGN4O00479 90 aa5.82□□□□□ -1.48
NEDD9-202ENST00000379446 FFAR1O14842 300 aa5.82□□□□□ -1.48
NEDD9-202ENST00000379446 MPZL1O95297 269 aa5.82□□□□□ -1.48
NEDD9-202ENST00000379446 HLA-DPB1P04440 258 aa5.82□□□□□ -1.48
NEDD9-202ENST00000379446 COX6A1P12074 109 aa5.82□□□□□ -1.48
NEDD9-202ENST00000379446 Q0VFX4 171 aa5.82□□□□□ -1.48
NEDD9-202ENST00000379446 OPCMLQ14982 345 aa5.82□□□□□ -1.48
NEDD9-202ENST00000379446 ZNF79Q15937 498 aa5.82□□□□□ -1.48
NEDD9-202ENST00000379446 THEM4Q5T1C6 240 aa5.82□□□□□ -1.48
NEDD9-202ENST00000379446 FBXW9Q5XUX1 488 aa5.82□□□□□ -1.48
NEDD9-202ENST00000379446 BRICD5Q6PL45 260 aa5.82□□□□□ -1.48
NEDD9-202ENST00000379446 C1orf174Q8IYL3 243 aa5.82□□□□□ -1.48
NEDD9-202ENST00000379446 UBAC2Q8NBM4 344 aa5.82□□□□□ -1.48
NEDD9-202ENST00000379446 OR6K3Q8NGY3 331 aa5.82□□□□□ -1.48
NEDD9-202ENST00000379446 OR4C12Q96R67 309 aa5.82□□□□□ -1.48
NEDD9-202ENST00000379446 ZNF649Q9BS31 505 aa5.82□□□□□ -1.48
NEDD9-202ENST00000379446 DDX31Q9H8H2 851 aaKnown RBP5.82□□□□□ -1.48
NEDD9-202ENST00000379446 NOX3Q9HBY0 568 aa5.82□□□□□ -1.48
NEDD9-202ENST00000379446 TRIM36Q9NQ86 728 aa5.82□□□□□ -1.48
NEDD9-202ENST00000379446 MEIKINA0A087WXM9 373 aa5.82□□□□□ -1.48
NEDD9-202ENST00000379446 UBE2QL1A1L167 161 aa5.82□□□□□ -1.48
NEDD9-202ENST00000379446 SERPINA5P05154 406 aa5.82□□□□□ -1.48
NEDD9-202ENST00000379446 EPXP11678 715 aa5.82□□□□□ -1.48
NEDD9-202ENST00000379446 LAP3P28838 519 aa5.82□□□□□ -1.48
NEDD9-202ENST00000379446 SUMO3P55854 103 aaPredicted RBP5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms