RNA–Protein interactions for RNA: ENST00000374730.2

USP48-202, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-202ENST00000374730 SLC25A12O75746 678 aa4.22□□□□□ -1.73
USP48-202ENST00000374730 SERPINI2O75830 405 aa4.22□□□□□ -1.73
USP48-202ENST00000374730 KRT33AO76009 404 aa4.22□□□□□ -1.73
USP48-202ENST00000374730 AKR7A3O95154 331 aa4.22□□□□□ -1.73
USP48-202ENST00000374730 AHSA1O95433 338 aa4.22□□□□□ -1.73
USP48-202ENST00000374730 ECDO95905 644 aaPredicted RBP4.22□□□□□ -1.73
USP48-202ENST00000374730 TCRBP04435 133 aa4.22□□□□□ -1.73
USP48-202ENST00000374730 CYC1P08574 325 aa4.22□□□□□ -1.73
USP48-202ENST00000374730 CD3GP09693 182 aa4.22□□□□□ -1.73
USP48-202ENST00000374730 NAGAP17050 411 aa4.22□□□□□ -1.73
USP48-202ENST00000374730 CSRP1P21291 193 aaKnown RBP4.22□□□□□ -1.73
USP48-202ENST00000374730 TCEA1P23193 301 aaKnown RBP4.22□□□□□ -1.73
USP48-202ENST00000374730 STOMP27105 288 aa4.22□□□□□ -1.73
USP48-202ENST00000374730 GRPRP30550 384 aa4.22□□□□□ -1.73
USP48-202ENST00000374730 RCVRNP35243 200 aa4.22□□□□□ -1.73
USP48-202ENST00000374730 CSNK1EP49674 416 aaKnown RBP4.22□□□□□ -1.73
USP48-202ENST00000374730 AP3S2P59780 193 aa4.22□□□□□ -1.73
USP48-202ENST00000374730 LCN6P62502 163 aa4.22□□□□□ -1.73
USP48-202ENST00000374730 ACY1Q03154 408 aa4.22□□□□□ -1.73
USP48-202ENST00000374730 ZP4Q12836 540 aa4.22□□□□□ -1.73
USP48-202ENST00000374730 SLC17A1Q14916 467 aa4.22□□□□□ -1.73
USP48-202ENST00000374730 ANGPT1Q15389 498 aa4.22□□□□□ -1.73
USP48-202ENST00000374730 TOMM34Q15785 309 aaPredicted RBP4.22□□□□□ -1.73
USP48-202ENST00000374730 ODF3L2Q3SX64 289 aa4.22□□□□□ -1.73
USP48-202ENST00000374730 VWA2Q5GFL6 755 aa4.22□□□□□ -1.73
USP48-202ENST00000374730 ELFN2Q5R3F8 820 aa4.22□□□□□ -1.73
USP48-202ENST00000374730 HES5Q5TA89 166 aa4.22□□□□□ -1.73
USP48-202ENST00000374730 BCL2L15Q5TBC7 163 aa4.22□□□□□ -1.73
USP48-202ENST00000374730 C1orf140Q5VVS0 124 aa4.22□□□□□ -1.73
USP48-202ENST00000374730 PWWP2BQ6NUJ5 590 aa4.22□□□□□ -1.73
USP48-202ENST00000374730 TMEM71Q6P5X7 295 aa4.22□□□□□ -1.73
USP48-202ENST00000374730 STAC2Q6ZMT1 411 aa4.22□□□□□ -1.73
USP48-202ENST00000374730 DNM1P46Q6ZS02 220 aa4.22□□□□□ -1.73
USP48-202ENST00000374730 ASB18Q6ZVZ8 466 aa4.22□□□□□ -1.73
USP48-202ENST00000374730 MARCH3Q86UD3 253 aa4.22□□□□□ -1.73
USP48-202ENST00000374730 LRRTM1Q86UE6 522 aa4.22□□□□□ -1.73
USP48-202ENST00000374730 SIAH3Q8IW03 269 aa4.22□□□□□ -1.73
USP48-202ENST00000374730 SLC25A45Q8N413 288 aa4.22□□□□□ -1.73
USP48-202ENST00000374730 NFAM1Q8NET5 270 aaPredicted RBP4.22□□□□□ -1.73
USP48-202ENST00000374730 OR6N2Q8NGY6 317 aa4.22□□□□□ -1.73
USP48-202ENST00000374730 OR2G2Q8NGZ5 317 aa4.22□□□□□ -1.73
USP48-202ENST00000374730 OR56B4Q8NH76 319 aa4.22□□□□□ -1.73
USP48-202ENST00000374730 OR5AK2Q8NH90 309 aa4.22□□□□□ -1.73
USP48-202ENST00000374730 LILRB4Q8NHJ6 448 aa4.22□□□□□ -1.73
USP48-202ENST00000374730 GRPEL2Q8TAA5 225 aa4.22□□□□□ -1.73
USP48-202ENST00000374730 NUBPLQ8TB37 319 aa4.22□□□□□ -1.73
USP48-202ENST00000374730 GPR148Q8TDV2 347 aa4.22□□□□□ -1.73
USP48-202ENST00000374730 GPR119Q8TDV5 335 aa4.22□□□□□ -1.73
USP48-202ENST00000374730 ASB5Q8WWX0 329 aa4.22□□□□□ -1.73
USP48-202ENST00000374730 METTL21AQ8WXB1 218 aa4.22□□□□□ -1.73
USP48-202ENST00000374730 TMEM234Q8WY98 164 aa4.22□□□□□ -1.73
USP48-202ENST00000374730 NSMAFQ92636 917 aa4.22□□□□□ -1.73
USP48-202ENST00000374730 HGDQ93099 445 aa4.22□□□□□ -1.73
USP48-202ENST00000374730 MCHR2Q969V1 340 aa4.22□□□□□ -1.73
USP48-202ENST00000374730 MIB2Q96AX9 1013 aa4.22□□□□□ -1.73
USP48-202ENST00000374730 HAVCR1Q96D42 359 aa4.22□□□□□ -1.73
USP48-202ENST00000374730 ZNF479Q96JC4 524 aa4.22□□□□□ -1.73
USP48-202ENST00000374730 HYLS1Q96M11 299 aa4.22□□□□□ -1.73
USP48-202ENST00000374730 TSSK2Q96PF2 358 aa4.22□□□□□ -1.73
USP48-202ENST00000374730 TMEM246Q9BRR3 403 aa4.22□□□□□ -1.73
USP48-202ENST00000374730 ZPBPQ9BS86 351 aa4.22□□□□□ -1.73
USP48-202ENST00000374730 CACNG6Q9BXT2 260 aa4.22□□□□□ -1.73
USP48-202ENST00000374730 COMMD4Q9H0A8 199 aa4.22□□□□□ -1.73
USP48-202ENST00000374730 SLC25A18Q9H1K4 315 aa4.22□□□□□ -1.73
USP48-202ENST00000374730 MED28Q9H204 178 aa4.22□□□□□ -1.73
USP48-202ENST00000374730 SYT4Q9H2B2 425 aa4.22□□□□□ -1.73
USP48-202ENST00000374730 TXNIPQ9H3M7 391 aa4.22□□□□□ -1.73
USP48-202ENST00000374730 FANCFQ9NPI8 374 aa4.22□□□□□ -1.73
USP48-202ENST00000374730 SLC22A11Q9NSA0 550 aa4.22□□□□□ -1.73
USP48-202ENST00000374730 FGF21Q9NSA1 209 aa4.22□□□□□ -1.73
USP48-202ENST00000374730 NUDT15Q9NV35 164 aa4.22□□□□□ -1.73
USP48-202ENST00000374730 PAQR5Q9NXK6 330 aaPredicted RBP4.22□□□□□ -1.73
USP48-202ENST00000374730 TAS2R5Q9NYW4 299 aa4.22□□□□□ -1.73
USP48-202ENST00000374730 KLHL9Q9P2J3 617 aa4.22□□□□□ -1.73
USP48-202ENST00000374730 OR5V1Q9UGF6 321 aa4.22□□□□□ -1.73
USP48-202ENST00000374730 LAMP5Q9UJQ1 280 aa4.22□□□□□ -1.73
USP48-202ENST00000374730 IKZF2Q9UKS7 526 aa4.22□□□□□ -1.73
USP48-202ENST00000374730 B9D1Q9UPM9 204 aa4.22□□□□□ -1.73
USP48-202ENST00000374730 PHF3Q92576 2039 aaKnown RBP4.22□□□□□ -1.73
USP48-202ENST00000374730 ALPK2Q86TB3 2170 aa4.21□□□□□ -1.73
USP48-202ENST00000374730 TRAV6A0A075B6T7 132 aa4.21□□□□□ -1.74
USP48-202ENST00000374730 IGLV3-32A0A0A0MS00 114 aa4.21□□□□□ -1.74
USP48-202ENST00000374730 TNFSF12-TNFSF13A0A0A6YY99 330 aa4.21□□□□□ -1.74
USP48-202ENST00000374730 A0A1B0GVI7 797 aa4.21□□□□□ -1.74
USP48-202ENST00000374730 ANKRD20A5PA0PJZ0 165 aa4.21□□□□□ -1.74
USP48-202ENST00000374730 A6NIN4 97 aa4.21□□□□□ -1.74
USP48-202ENST00000374730 A6NIZ1 184 aa4.21□□□□□ -1.74
USP48-202ENST00000374730 VSTM2BA6NLU5 285 aa4.21□□□□□ -1.74
USP48-202ENST00000374730 ZNF593O00488 134 aaPredicted RBP4.21□□□□□ -1.74
USP48-202ENST00000374730 PLPP3O14495 311 aa4.21□□□□□ -1.74
USP48-202ENST00000374730 ZNF208O43345 1280 aa4.21□□□□□ -1.74
USP48-202ENST00000374730 RPP14O95059 124 aaKnown RBP4.21□□□□□ -1.74
USP48-202ENST00000374730 OR6A2O95222 327 aa4.21□□□□□ -1.74
USP48-202ENST00000374730 NUDT14O95848 222 aa4.21□□□□□ -1.74
USP48-202ENST00000374730 TGM6O95932 706 aa4.21□□□□□ -1.74
USP48-202ENST00000374730 SULT1A3P0DMM9 295 aa4.21□□□□□ -1.74
USP48-202ENST00000374730 SULT1A4P0DMN0 295 aa4.21□□□□□ -1.74
USP48-202ENST00000374730 CD37P11049 281 aa4.21□□□□□ -1.74
USP48-202ENST00000374730 ANXA3P12429 323 aa4.21□□□□□ -1.74
USP48-202ENST00000374730 ADRA2CP18825 462 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms