RNA–Protein interactions for RNA: ENST00000371817.7

COL5A1-201, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL5A1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-201ENST00000371817 ARRDC3Q96B67 414 aa13.92□□□□□ -0.18
COL5A1-201ENST00000371817 KLK11Q9UBX7 282 aa13.92□□□□□ -0.18
COL5A1-201ENST00000371817 CD96P40200 585 aa13.92□□□□□ -0.18
COL5A1-201ENST00000371817 DIO1P49895 249 aa13.92□□□□□ -0.18
COL5A1-201ENST00000371817 FAM3AP98173 230 aa13.92□□□□□ -0.18
COL5A1-201ENST00000371817 EDDM3AQ14507 147 aa13.92□□□□□ -0.18
COL5A1-201ENST00000371817 PDLIM5Q96HC4 596 aaKnown RBP13.92□□□□□ -0.18
COL5A1-201ENST00000371817 OR2D2Q9H210 308 aa13.92□□□□□ -0.18
COL5A1-201ENST00000371817 DYNLRB1Q9NP97 96 aa13.92□□□□□ -0.18
COL5A1-201ENST00000371817 TRAV1-2A0A0B4J238 106 aa13.91□□□□□ -0.18
COL5A1-201ENST00000371817 A6NCN8 305 aa13.91□□□□□ -0.18
COL5A1-201ENST00000371817 CER1O95813 267 aa13.91□□□□□ -0.18
COL5A1-201ENST00000371817 FKBP1BP68106 108 aa13.91□□□□□ -0.18
COL5A1-201ENST00000371817 SEMA3BQ13214 749 aa13.91□□□□□ -0.18
COL5A1-201ENST00000371817 MANEAQ5SRI9 462 aa13.91□□□□□ -0.18
COL5A1-201ENST00000371817 CEP250Q9BV73 2442 aa13.91□□□□□ -0.18
COL5A1-201ENST00000371817 MYADML2A6NDP7 307 aa13.91□□□□□ -0.18
COL5A1-201ENST00000371817 NDUFS8O00217 210 aa13.91□□□□□ -0.18
COL5A1-201ENST00000371817 CYC1P08574 325 aa13.91□□□□□ -0.18
COL5A1-201ENST00000371817 ZNF252P-AS1Q0IIN9 211 aa13.91□□□□□ -0.18
COL5A1-201ENST00000371817 EXT1Q16394 746 aa13.91□□□□□ -0.18
COL5A1-201ENST00000371817 C12orf54Q6X4T0 127 aa13.91□□□□□ -0.18
COL5A1-201ENST00000371817 PFN4Q8NHR9 129 aa13.91□□□□□ -0.18
COL5A1-201ENST00000371817 MUCL1Q96DR8 90 aa13.91□□□□□ -0.18
COL5A1-201ENST00000371817 SOX21Q9Y651 276 aaPredicted RBP13.91□□□□□ -0.18
COL5A1-201ENST00000371817 NUP188Q5SRE5 1749 aa13.91□□□□□ -0.18
COL5A1-201ENST00000371817 FAM78BQ5VT40 261 aa13.91□□□□□ -0.18
COL5A1-201ENST00000371817 TMEM229BQ8NBD8 167 aa13.91□□□□□ -0.18
COL5A1-201ENST00000371817 ZNF480Q8WV37 535 aa13.91□□□□□ -0.18
COL5A1-201ENST00000371817 ISOC2Q96AB3 205 aa13.91□□□□□ -0.18
COL5A1-201ENST00000371817 RGPD8O14715 1765 aaPredicted RBP13.91□□□□□ -0.18
COL5A1-201ENST00000371817 CST7O76096 145 aa13.91□□□□□ -0.18
COL5A1-201ENST00000371817 ST3GAL2Q16842 350 aa13.91□□□□□ -0.18
COL5A1-201ENST00000371817 CBLN2Q8IUK8 224 aa13.91□□□□□ -0.18
COL5A1-201ENST00000371817 THOC3Q96J01 351 aaKnown RBP13.91□□□□□ -0.18
COL5A1-201ENST00000371817 NTNG1Q9Y2I2 539 aa13.91□□□□□ -0.18
COL5A1-201ENST00000371817 RBFOX3A6NFN3 312 aa13.91□□□□□ -0.18
COL5A1-201ENST00000371817 HSPB2A8KAH6 182 aa13.91□□□□□ -0.18
COL5A1-201ENST00000371817 GJB5O95377 273 aa13.91□□□□□ -0.18
COL5A1-201ENST00000371817 OPN1LWP04000 364 aa13.91□□□□□ -0.18
COL5A1-201ENST00000371817 CRYBA1P05813 215 aa13.91□□□□□ -0.18
COL5A1-201ENST00000371817 NPY1RP25929 384 aa13.91□□□□□ -0.18
COL5A1-201ENST00000371817 HSPB2Q16082 182 aa13.91□□□□□ -0.18
COL5A1-201ENST00000371817 PIANPQ8IYJ0 282 aa13.91□□□□□ -0.18
COL5A1-201ENST00000371817 NTNG2Q96CW9 530 aa13.91□□□□□ -0.18
COL5A1-201ENST00000371817 MANBALQ9NQG1 85 aa13.91□□□□□ -0.18
COL5A1-201ENST00000371817 COL5A2P05997 1499 aaPredicted RBP13.91□□□□□ -0.18
COL5A1-201ENST00000371817 RIMBP3CA6NJZ7 1639 aa13.91□□□□□ -0.18
COL5A1-201ENST00000371817 RIMBP3BA6NNM3 1639 aa13.91□□□□□ -0.18
COL5A1-201ENST00000371817 RIMBP3Q9UFD9 1639 aa13.91□□□□□ -0.18
COL5A1-201ENST00000371817 CBR3O75828 277 aa13.91□□□□□ -0.18
COL5A1-201ENST00000371817 YIF1AO95070 293 aa13.91□□□□□ -0.18
COL5A1-201ENST00000371817 PRSS1P07477 247 aa13.91□□□□□ -0.18
COL5A1-201ENST00000371817 ELNP15502 786 aa13.91□□□□□ -0.18
COL5A1-201ENST00000371817 EN2P19622 333 aaPredicted RBP13.91□□□□□ -0.18
COL5A1-201ENST00000371817 EMC4Q5J8M3 183 aa13.91□□□□□ -0.18
COL5A1-201ENST00000371817 MYPOPQ86VE0 399 aaPredicted RBP13.91□□□□□ -0.18
COL5A1-201ENST00000371817 WDR83Q9BRX9 315 aaKnown RBP13.91□□□□□ -0.18
COL5A1-201ENST00000371817 GPR62Q9BZJ7 368 aa13.91□□□□□ -0.18
COL5A1-201ENST00000371817 CDC14CA4D256 554 aa13.91□□□□□ -0.18
COL5A1-201ENST00000371817 HIST1H1CP16403 213 aaKnown RBP13.91□□□□□ -0.18
COL5A1-201ENST00000371817 AOAHP28039 575 aa13.91□□□□□ -0.18
COL5A1-201ENST00000371817 ACAA2P42765 397 aaKnown RBP13.91□□□□□ -0.18
COL5A1-201ENST00000371817 CTF1Q16619 201 aa13.91□□□□□ -0.18
COL5A1-201ENST00000371817 B3GNTL1Q67FW5 361 aaPredicted RBP13.91□□□□□ -0.18
COL5A1-201ENST00000371817 VHLLQ6RSH7 139 aa13.91□□□□□ -0.18
COL5A1-201ENST00000371817 OR10X1Q8NGY0 326 aa13.91□□□□□ -0.18
COL5A1-201ENST00000371817 OR2A14Q96R47 310 aa13.91□□□□□ -0.18
COL5A1-201ENST00000371817 KIAA1456Q9P272 454 aa13.91□□□□□ -0.18
COL5A1-201ENST00000371817 NKX6-3A6NJ46 265 aa13.9□□□□□ -0.18
COL5A1-201ENST00000371817 TMEM176BQ3YBM2 270 aaPredicted RBP13.9□□□□□ -0.18
COL5A1-201ENST00000371817 SLIRPQ9GZT3 109 aaKnown RBP13.9□□□□□ -0.18
COL5A1-201ENST00000371817 ORM1P02763 201 aa13.9□□□□□ -0.18
COL5A1-201ENST00000371817 SLURP2P0DP57 97 aa13.9□□□□□ -0.18
COL5A1-201ENST00000371817 COL9A2Q14055 689 aaPredicted RBP13.9□□□□□ -0.18
COL5A1-201ENST00000371817 LIPNQ5VXI9 398 aa13.9□□□□□ -0.18
COL5A1-201ENST00000371817 SLC17A9Q9BYT1 436 aa13.9□□□□□ -0.18
COL5A1-201ENST00000371817 CEP290O15078 2479 aa13.9□□□□□ -0.18
COL5A1-201ENST00000371817 ZAR1LA6NP61 321 aa13.9□□□□□ -0.18
COL5A1-201ENST00000371817 GCSHP23434 173 aa13.9□□□□□ -0.18
COL5A1-201ENST00000371817 FAM109BQ6ICB4 259 aaPredicted RBP13.9□□□□□ -0.18
COL5A1-201ENST00000371817 LHFPL2Q6ZUX7 228 aa13.9□□□□□ -0.18
COL5A1-201ENST00000371817 OR2T6Q8NHC8 308 aa13.9□□□□□ -0.18
COL5A1-201ENST00000371817 DECR2Q9NUI1 292 aa13.9□□□□□ -0.18
COL5A1-201ENST00000371817 MEIKINA0A087WXM9 373 aa13.9□□□□□ -0.18
COL5A1-201ENST00000371817 TRBV11-1A0A0K0K1C0 115 aa13.9□□□□□ -0.18
COL5A1-201ENST00000371817 SERINC4A6NH21 518 aa13.9□□□□□ -0.18
COL5A1-201ENST00000371817 MT-ATP6P00846 226 aa13.9□□□□□ -0.18
COL5A1-201ENST00000371817 ABOP16442 354 aa13.9□□□□□ -0.18
COL5A1-201ENST00000371817 UBE2V2Q15819 145 aa13.9□□□□□ -0.18
COL5A1-201ENST00000371817 WDR81Q562E7 1941 aa13.9□□□□□ -0.18
COL5A1-201ENST00000371817 LOC107986453A0A1B0GWG9 222 aa13.9□□□□□ -0.18
COL5A1-201ENST00000371817 ZDHHC22Q8N966 263 aa13.9□□□□□ -0.18
COL5A1-201ENST00000371817 MARVELD1Q9BSK0 173 aa13.9□□□□□ -0.18
COL5A1-201ENST00000371817 HSFX1Q9UBD0 423 aa13.9□□□□□ -0.18
COL5A1-201ENST00000371817 NAT8Q9UHE5 227 aa13.9□□□□□ -0.18
COL5A1-201ENST00000371817 MON2Q7Z3U7 1717 aa13.9□□□□□ -0.18
COL5A1-201ENST00000371817 KIDINS220Q9ULH0 1771 aa13.9□□□□□ -0.18
COL5A1-201ENST00000371817 SLC19A1P41440 591 aa13.9□□□□□ -0.18
COL5A1-201ENST00000371817 OR1C1Q15619 314 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms