RNA–Protein interactions for RNA: ENST00000369530.5

CSDE1-204, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,774 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-204ENST00000369530 BMI1P35226 326 aa6.1□□□□□ -1.43
CSDE1-204ENST00000369530 SLC6A9P48067 706 aa6.1□□□□□ -1.43
CSDE1-204ENST00000369530 RAB1AP62820 205 aa6.1□□□□□ -1.43
CSDE1-204ENST00000369530 AIMP2Q13155 320 aaKnown RBP6.1□□□□□ -1.43
CSDE1-204ENST00000369530 RHEBQ15382 184 aa6.1□□□□□ -1.43
CSDE1-204ENST00000369530 VWA2Q5GFL6 755 aa6.1□□□□□ -1.43
CSDE1-204ENST00000369530 PHF19Q5T6S3 580 aa6.1□□□□□ -1.43
CSDE1-204ENST00000369530 ULK3Q6PHR2 472 aa6.1□□□□□ -1.43
CSDE1-204ENST00000369530 DEGS2Q6QHC5 323 aa6.1□□□□□ -1.43
CSDE1-204ENST00000369530 PXKQ7Z7A4 578 aa6.1□□□□□ -1.43
CSDE1-204ENST00000369530 ZNF573Q86YE8 665 aa6.1□□□□□ -1.43
CSDE1-204ENST00000369530 ACOT4Q8N9L9 421 aa6.1□□□□□ -1.43
CSDE1-204ENST00000369530 ADGRG7Q96K78 797 aa6.1□□□□□ -1.43
CSDE1-204ENST00000369530 MRI1Q9BV20 369 aa6.1□□□□□ -1.43
CSDE1-204ENST00000369530 RTN4RQ9BZR6 473 aa6.1□□□□□ -1.43
CSDE1-204ENST00000369530 CXorf36Q9H7Y0 433 aa6.1□□□□□ -1.43
CSDE1-204ENST00000369530 MYNNQ9NPC7 610 aa6.1□□□□□ -1.43
CSDE1-204ENST00000369530 ABRACLQ9P1F3 81 aa6.1□□□□□ -1.43
CSDE1-204ENST00000369530 KCNE5Q9UJ90 142 aa6.1□□□□□ -1.43
CSDE1-204ENST00000369530 SPIN1Q9Y657 262 aaPredicted RBP6.1□□□□□ -1.43
CSDE1-204ENST00000369530 KPTNQ9Y664 436 aa6.1□□□□□ -1.43
CSDE1-204ENST00000369530 OR10H3O60404 316 aa6.09□□□□□ -1.43
CSDE1-204ENST00000369530 KHDRBS3O75525 346 aaKnown RBP6.09□□□□□ -1.43
CSDE1-204ENST00000369530 IL33O95760 270 aa6.09□□□□□ -1.43
CSDE1-204ENST00000369530 IFNW1P05000 195 aa6.09□□□□□ -1.43
CSDE1-204ENST00000369530 NPSP0C0P6 89 aa6.09□□□□□ -1.43
CSDE1-204ENST00000369530 FAM87AP0C7U9 286 aa6.09□□□□□ -1.43
CSDE1-204ENST00000369530 FGF7P21781 194 aa6.09□□□□□ -1.43
CSDE1-204ENST00000369530 HTR2CP28335 458 aa6.09□□□□□ -1.43
CSDE1-204ENST00000369530 RAD52P43351 418 aa6.09□□□□□ -1.43
CSDE1-204ENST00000369530 CAV3P56539 151 aa6.09□□□□□ -1.43
CSDE1-204ENST00000369530 CLDN15P56746 228 aa6.09□□□□□ -1.43
CSDE1-204ENST00000369530 OR2B8PP59922 312 aa6.09□□□□□ -1.43
CSDE1-204ENST00000369530 SELENOWP63302 87 aa6.09□□□□□ -1.43
CSDE1-204ENST00000369530 MRPS10P82664 201 aaKnown RBP6.09□□□□□ -1.43
CSDE1-204ENST00000369530 SRSF3P84103 164 aaKnown RBP6.09□□□□□ -1.43
CSDE1-204ENST00000369530 RSU1Q15404 277 aa6.09□□□□□ -1.43
CSDE1-204ENST00000369530 GFOD2Q3B7J2 385 aa6.09□□□□□ -1.43
CSDE1-204ENST00000369530 PRR30Q53SZ7 412 aaPredicted RBP6.09□□□□□ -1.43
CSDE1-204ENST00000369530 C18orf63Q68DL7 685 aa6.09□□□□□ -1.43
CSDE1-204ENST00000369530 CSNK1A1LQ8N752 337 aa6.09□□□□□ -1.43
CSDE1-204ENST00000369530 POGLUT1Q8NBL1 392 aa6.09□□□□□ -1.43
CSDE1-204ENST00000369530 OR2AK2Q8NG84 335 aa6.09□□□□□ -1.43
CSDE1-204ENST00000369530 NEIL3Q8TAT5 605 aa6.09□□□□□ -1.43
CSDE1-204ENST00000369530 NUDCD2Q8WVJ2 157 aa6.09□□□□□ -1.43
CSDE1-204ENST00000369530 APOBEC4Q8WW27 367 aaKnown RBP6.09□□□□□ -1.43
CSDE1-204ENST00000369530 FOXRED1Q96CU9 486 aaPredicted RBP6.09□□□□□ -1.43
CSDE1-204ENST00000369530 WDR89Q96FK6 387 aaPredicted RBP6.09□□□□□ -1.43
CSDE1-204ENST00000369530 RCC1LQ96I51 464 aaKnown RBP6.09□□□□□ -1.43
CSDE1-204ENST00000369530 UBQLN4Q9NRR5 601 aa6.09□□□□□ -1.43
CSDE1-204ENST00000369530 P4HTMQ9NXG6 502 aa6.09□□□□□ -1.43
CSDE1-204ENST00000369530 PRODH2Q9UF12 536 aa6.09□□□□□ -1.43
CSDE1-204ENST00000369530 EXOGQ9Y2C4 368 aaKnown RBP6.09□□□□□ -1.43
CSDE1-204ENST00000369530 YARS2Q9Y2Z4 477 aaKnown RBP6.09□□□□□ -1.43
CSDE1-204ENST00000369530 OR14I1A6ND48 311 aa6.09□□□□□ -1.43
CSDE1-204ENST00000369530 J3QRE1 110 aa6.09□□□□□ -1.43
CSDE1-204ENST00000369530 SPDEFO95238 335 aa6.09□□□□□ -1.43
CSDE1-204ENST00000369530 NGFRP08138 427 aa6.09□□□□□ -1.43
CSDE1-204ENST00000369530 FCGR3AP08637 254 aa6.09□□□□□ -1.43
CSDE1-204ENST00000369530 LIMS3P0CW19 117 aa6.09□□□□□ -1.43
CSDE1-204ENST00000369530 LIMS4P0CW20 117 aa6.09□□□□□ -1.43
CSDE1-204ENST00000369530 RD3LP0DJH9 198 aa6.09□□□□□ -1.43
CSDE1-204ENST00000369530 CSNK2A2P19784 350 aaPredicted RBP6.09□□□□□ -1.43
CSDE1-204ENST00000369530 NT5EP21589 574 aa6.09□□□□□ -1.43
CSDE1-204ENST00000369530 EPHA1P21709 976 aa6.09□□□□□ -1.43
CSDE1-204ENST00000369530 EMDP50402 254 aa6.09□□□□□ -1.43
CSDE1-204ENST00000369530 ART1P52961 327 aa6.09□□□□□ -1.43
CSDE1-204ENST00000369530 AP3S2P59780 193 aa6.09□□□□□ -1.43
CSDE1-204ENST00000369530 PSG6Q00889 435 aa6.09□□□□□ -1.43
CSDE1-204ENST00000369530 FUT5Q11128 374 aa6.09□□□□□ -1.43
CSDE1-204ENST00000369530 PAQR6Q6TCH4 344 aa6.09□□□□□ -1.43
CSDE1-204ENST00000369530 HIST2H3AQ71DI3 136 aa6.09□□□□□ -1.43
CSDE1-204ENST00000369530 KRTAP1-3Q8IUG1 177 aa6.09□□□□□ -1.43
CSDE1-204ENST00000369530 METTL27Q8N6F8 245 aaPredicted RBP6.09□□□□□ -1.43
CSDE1-204ENST00000369530 OR52N4Q8NGI2 321 aa6.09□□□□□ -1.43
CSDE1-204ENST00000369530 ADAMTS15Q8TE58 950 aa6.09□□□□□ -1.43
CSDE1-204ENST00000369530 PAQR8Q8TEZ7 354 aa6.09□□□□□ -1.43
CSDE1-204ENST00000369530 OR5P2Q8WZ92 322 aa6.09□□□□□ -1.43
CSDE1-204ENST00000369530 VSTM2LQ96N03 204 aa6.09□□□□□ -1.43
CSDE1-204ENST00000369530 DOCK7Q96N67 2140 aa6.09□□□□□ -1.43
CSDE1-204ENST00000369530 LAT2Q9GZY6 243 aa6.09□□□□□ -1.43
CSDE1-204ENST00000369530 TRRAPQ9Y4A5 3859 aa6.09□□□□□ -1.44
CSDE1-204ENST00000369530 TRBV6-7A0A0A0MS04 114 aa6.09□□□□□ -1.44
CSDE1-204ENST00000369530 C1orf226A1L170 272 aa6.09□□□□□ -1.44
CSDE1-204ENST00000369530 FAM171A2A8MVW0 826 aa6.09□□□□□ -1.44
CSDE1-204ENST00000369530 PGRMC2O15173 223 aa6.09□□□□□ -1.44
CSDE1-204ENST00000369530 ZNF25P17030 456 aaPredicted RBP6.09□□□□□ -1.44
CSDE1-204ENST00000369530 GFRA1P56159 465 aa6.09□□□□□ -1.44
CSDE1-204ENST00000369530 LY6DQ14210 128 aa6.09□□□□□ -1.44
CSDE1-204ENST00000369530 SLC10A1Q14973 349 aa6.09□□□□□ -1.44
CSDE1-204ENST00000369530 CPEB2Q7Z5Q1 589 aaKnown RBP6.09□□□□□ -1.44
CSDE1-204ENST00000369530 OR2L13Q8N349 312 aa6.09□□□□□ -1.44
CSDE1-204ENST00000369530 GATAD2BQ8WXI9 593 aa6.09□□□□□ -1.44
CSDE1-204ENST00000369530 S100PBPQ96BU1 408 aa6.09□□□□□ -1.44
CSDE1-204ENST00000369530 TMEM19Q96HH6 336 aa6.09□□□□□ -1.44
CSDE1-204ENST00000369530 ZNF607Q96SK3 696 aa6.09□□□□□ -1.44
CSDE1-204ENST00000369530 SYT4Q9H2B2 425 aa6.09□□□□□ -1.44
CSDE1-204ENST00000369530 NOX3Q9HBY0 568 aa6.09□□□□□ -1.44
CSDE1-204ENST00000369530 NEUROD4Q9HD90 331 aa6.09□□□□□ -1.44
CSDE1-204ENST00000369530 SERINC1Q9NRX5 453 aa6.09□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms